RNA–Protein interactions for RNA: ENST00000616396.1

AL390964.1-202, humanhuman

TSL 3

Gene AL390964.1, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390964.1-202ENST00000616396 NYAP1Q6ZVC0 841 aa6.71□□□□□ -1.34
AL390964.1-202ENST00000616396 ZFRQ96KR1 1074 aaKnown RBP6.7□□□□□ -1.34
AL390964.1-202ENST00000616396 LARP6Q9BRS8 491 aaKnown RBP6.7□□□□□ -1.34
AL390964.1-202ENST00000616396 WBP1LQ9NX94 342 aa6.7□□□□□ -1.34
AL390964.1-202ENST00000616396 DDX27Q96GQ7 796 aaKnown RBP6.69□□□□□ -1.34
AL390964.1-202ENST00000616396 KIAA1468Q9P260 1216 aa6.69□□□□□ -1.34
AL390964.1-202ENST00000616396 FBXW7Q969H0 707 aa6.68□□□□□ -1.34
AL390964.1-202ENST00000616396 EMILIN3Q9NT22 766 aa6.68□□□□□ -1.34
AL390964.1-202ENST00000616396 LAPTM4AQ15012 233 aa6.67□□□□□ -1.34
AL390964.1-202ENST00000616396 TYW1BQ6NUM6 668 aa6.67□□□□□ -1.34
AL390964.1-202ENST00000616396 LCE2BO14633 110 aa6.66□□□□□ -1.34
AL390964.1-202ENST00000616396 ONECUT3O60422 494 aaPredicted RBP6.66□□□□□ -1.34
AL390964.1-202ENST00000616396 PHF14O94880 888 aa6.66□□□□□ -1.34
AL390964.1-202ENST00000616396 MFSD10Q14728 455 aa6.66□□□□□ -1.34
AL390964.1-202ENST00000616396 SEPT9Q9UHD8 586 aaPredicted RBP6.66□□□□□ -1.34
AL390964.1-202ENST00000616396 GFRA3O60609 400 aa6.63□□□□□ -1.35
AL390964.1-202ENST00000616396 FAM98CQ17RN3 349 aaKnown RBP6.63□□□□□ -1.35
AL390964.1-202ENST00000616396 C6orf132Q5T0Z8 1188 aa6.63□□□□□ -1.35
AL390964.1-202ENST00000616396 TRAF7Q6Q0C0 670 aa6.63□□□□□ -1.35
AL390964.1-202ENST00000616396 TSR3Q9UJK0 312 aaKnown RBP6.63□□□□□ -1.35
AL390964.1-202ENST00000616396 HPS5Q9UPZ3 1129 aa6.63□□□□□ -1.35
AL390964.1-202ENST00000616396 TRIM6-TRIM34B2RNG4 842 aa6.62□□□□□ -1.35
AL390964.1-202ENST00000616396 GTPBP6O43824 516 aaPredicted RBP6.62□□□□□ -1.35
AL390964.1-202ENST00000616396 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.62□□□□□ -1.35
AL390964.1-202ENST00000616396 LRCH3Q96II8 777 aa6.61□□□□□ -1.35
AL390964.1-202ENST00000616396 EPAS1Q99814 870 aa6.61□□□□□ -1.35
AL390964.1-202ENST00000616396 PRKD2Q9BZL6 878 aa6.58□□□□□ -1.36
AL390964.1-202ENST00000616396 NRG2O14511 850 aaPredicted RBP6.57□□□□□ -1.36
AL390964.1-202ENST00000616396 TJAP1Q5JTD0 557 aa6.57□□□□□ -1.36
AL390964.1-202ENST00000616396 RBM33Q96EV2 1170 aaKnown RBP6.57□□□□□ -1.36
AL390964.1-202ENST00000616396 PPP4CP60510 307 aa6.56□□□□□ -1.36
AL390964.1-202ENST00000616396 CADPS2Q86UW7 1296 aa6.55□□□□□ -1.36
AL390964.1-202ENST00000616396 PACS2Q86VP3 889 aa6.55□□□□□ -1.36
AL390964.1-202ENST00000616396 TSKSQ9UJT2 592 aa6.55□□□□□ -1.36
AL390964.1-202ENST00000616396 DPYSL4O14531 572 aa6.54□□□□□ -1.36
AL390964.1-202ENST00000616396 CAMK2BQ13554 666 aa6.54□□□□□ -1.36
AL390964.1-202ENST00000616396 DDX12PQ92771 950 aa6.54□□□□□ -1.36
AL390964.1-202ENST00000616396 V9GY48 417 aaPredicted RBP6.54□□□□□ -1.36
AL390964.1-202ENST00000616396 PPP1R18Q6NYC8 613 aa6.53□□□□□ -1.36
AL390964.1-202ENST00000616396 SAMD7Q7Z3H4 446 aa6.52□□□□□ -1.37
AL390964.1-202ENST00000616396 MTRQ99707 1265 aa6.52□□□□□ -1.37
AL390964.1-202ENST00000616396 TSR1Q2NL82 804 aaKnown RBP6.51□□□□□ -1.37
AL390964.1-202ENST00000616396 ZNF787Q6DD87 383 aa6.51□□□□□ -1.37
AL390964.1-202ENST00000616396 IL21Q9HBE4 155 aa6.51□□□□□ -1.37
AL390964.1-202ENST00000616396 EN1Q05925 392 aaPredicted RBP6.5□□□□□ -1.37
AL390964.1-202ENST00000616396 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.5□□□□□ -1.37
AL390964.1-202ENST00000616396 SMAPO00193 183 aa6.49□□□□□ -1.37
AL390964.1-202ENST00000616396 MAP3K7O43318 606 aa6.49□□□□□ -1.37
AL390964.1-202ENST00000616396 NBR1Q14596 966 aa6.49□□□□□ -1.37
AL390964.1-202ENST00000616396 ZNF516Q92618 1163 aa6.49□□□□□ -1.37
AL390964.1-202ENST00000616396 PDZRN3Q9UPQ7 1066 aa6.49□□□□□ -1.37
AL390964.1-202ENST00000616396 CDCA7LQ96GN5 454 aa6.48□□□□□ -1.37
AL390964.1-202ENST00000616396 FAM198AQ9UFP1 575 aa6.48□□□□□ -1.37
AL390964.1-202ENST00000616396 C3orf80F5H4A9 247 aa6.47□□□□□ -1.37
AL390964.1-202ENST00000616396 PRSS12P56730 875 aa6.47□□□□□ -1.37
AL390964.1-202ENST00000616396 ZNF775Q96BV0 537 aaPredicted RBP6.47□□□□□ -1.37
AL390964.1-202ENST00000616396 NKX2-3Q8TAU0 364 aa6.46□□□□□ -1.38
AL390964.1-202ENST00000616396 TATDN2Q93075 761 aa6.46□□□□□ -1.38
AL390964.1-202ENST00000616396 APLP1P51693 650 aa6.45□□□□□ -1.38
AL390964.1-202ENST00000616396 PNMA3Q9UL41 463 aa6.44□□□□□ -1.38
AL390964.1-202ENST00000616396 NBPF26B4DH59 902 aa6.43□□□□□ -1.38
AL390964.1-202ENST00000616396 PDIA6Q15084 440 aa6.43□□□□□ -1.38
AL390964.1-202ENST00000616396 CERKQ8TCT0 537 aa6.43□□□□□ -1.38
AL390964.1-202ENST00000616396 RTN4Q9NQC3 1192 aaKnown RBP6.43□□□□□ -1.38
AL390964.1-202ENST00000616396 RNF40O75150 1001 aa6.42□□□□□ -1.38
AL390964.1-202ENST00000616396 GGCXP38435 758 aa6.42□□□□□ -1.38
AL390964.1-202ENST00000616396 PRIM1P49642 420 aaKnown RBP6.42□□□□□ -1.38
AL390964.1-202ENST00000616396 HDGFP51858 240 aaKnown RBP6.42□□□□□ -1.38
AL390964.1-202ENST00000616396 TMUB1Q9BVT8 246 aa6.41□□□□□ -1.38
AL390964.1-202ENST00000616396 SPDYE16A6NNV3 312 aaPredicted RBP6.4□□□□□ -1.38
AL390964.1-202ENST00000616396 COPS2P61201 443 aa6.4□□□□□ -1.38
AL390964.1-202ENST00000616396 NUDT18Q6ZVK8 323 aa6.4□□□□□ -1.38
AL390964.1-202ENST00000616396 TRIM67Q6ZTA4 783 aa6.39□□□□□ -1.39
AL390964.1-202ENST00000616396 DCAF8L2P0C7V8 631 aa6.38□□□□□ -1.39
AL390964.1-202ENST00000616396 NECTIN2Q92692 538 aa6.38□□□□□ -1.39
AL390964.1-202ENST00000616396 GRXCR2A6NFK2 248 aa6.37□□□□□ -1.39
AL390964.1-202ENST00000616396 ZPR1O75312 459 aa6.37□□□□□ -1.39
AL390964.1-202ENST00000616396 MYT1Q01538 1121 aa6.37□□□□□ -1.39
AL390964.1-202ENST00000616396 RBM27Q9P2N5 1060 aaKnown RBP6.37□□□□□ -1.39
AL390964.1-202ENST00000616396 SLC19A1P41440 591 aa6.36□□□□□ -1.39
AL390964.1-202ENST00000616396 PKDCCQ504Y2 493 aa6.36□□□□□ -1.39
AL390964.1-202ENST00000616396 SWT1Q5T5J6 900 aaKnown RBP6.36□□□□□ -1.39
AL390964.1-202ENST00000616396 EMID1Q96A84 441 aaPredicted RBP6.36□□□□□ -1.39
AL390964.1-202ENST00000616396 CDHR5Q9HBB8 845 aa6.36□□□□□ -1.39
AL390964.1-202ENST00000616396 POTECB2RU33 542 aa6.35□□□□□ -1.39
AL390964.1-202ENST00000616396 RNF223E7ERA6 249 aa6.35□□□□□ -1.39
AL390964.1-202ENST00000616396 DGAT1O75907 488 aa6.35□□□□□ -1.39
AL390964.1-202ENST00000616396 SLF2Q8IX21 1173 aa6.35□□□□□ -1.39
AL390964.1-202ENST00000616396 OSBPP22059 807 aa6.34□□□□□ -1.39
AL390964.1-202ENST00000616396 TTC13Q8NBP0 860 aa6.34□□□□□ -1.39
AL390964.1-202ENST00000616396 SPRYD7Q5W111 196 aa6.33□□□□□ -1.4
AL390964.1-202ENST00000616396 PRR20EP86478 221 aa6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 PRR20CP86479 221 aa6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 PRR20DP86480 221 aa6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 PRR20BP86481 221 aa6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 PRR20AP86496 221 aa6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 ZNF598Q86UK7 904 aaKnown RBP6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 ARIH1Q9Y4X5 557 aaPredicted RBP6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 PCDHB3Q9Y5E6 796 aa6.32□□□□□ -1.4
AL390964.1-202ENST00000616396 SLC4A3P48751 1232 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms