RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
PDLIM2-219ENST00000616289 KIF3BO15066 747 aa17.01■□□□□ 0.31
PDLIM2-219ENST00000616289 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
PDLIM2-219ENST00000616289 PZPP20742 1482 aa17■□□□□ 0.31
PDLIM2-219ENST00000616289 MAST1Q9Y2H9 1570 aa17■□□□□ 0.31
PDLIM2-219ENST00000616289 MAP3K1Q13233 1512 aa17■□□□□ 0.31
PDLIM2-219ENST00000616289 PKD2Q13563 968 aa16.98■□□□□ 0.31
PDLIM2-219ENST00000616289 RNF17Q9BXT8 1623 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-219ENST00000616289 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-219ENST00000616289 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-219ENST00000616289 KANK4Q5T7N3 995 aaPredicted RBP16.97■□□□□ 0.31
PDLIM2-219ENST00000616289 TNRQ92752 1358 aa16.97■□□□□ 0.31
PDLIM2-219ENST00000616289 FBXO31Q5XUX0 539 aaPredicted RBP16.96■□□□□ 0.31
PDLIM2-219ENST00000616289 NEURL4Q96JN8 1562 aa16.95■□□□□ 0.3
PDLIM2-219ENST00000616289 TSPY4P0CV99 314 aa16.95■□□□□ 0.3
PDLIM2-219ENST00000616289 TSPY10P0CW01 314 aa16.95■□□□□ 0.3
PDLIM2-219ENST00000616289 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-219ENST00000616289 MYOM3Q5VTT5 1437 aa16.95■□□□□ 0.3
PDLIM2-219ENST00000616289 WASHC2CQ9Y4E1 1318 aa16.95■□□□□ 0.3
PDLIM2-219ENST00000616289 ZC3H13Q5T200 1668 aaKnown RBP16.94■□□□□ 0.3
PDLIM2-219ENST00000616289 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
PDLIM2-219ENST00000616289 ABCC3O15438 1527 aa16.93■□□□□ 0.3
PDLIM2-219ENST00000616289 MROH1Q8NDA8 1641 aa16.92■□□□□ 0.3
PDLIM2-219ENST00000616289 NLRP1Q9C000 1473 aa16.91■□□□□ 0.3
PDLIM2-219ENST00000616289 CROCC2H7BZ55 1655 aa16.91■□□□□ 0.3
PDLIM2-219ENST00000616289 UGGT1Q9NYU2 1555 aa16.89■□□□□ 0.3
PDLIM2-219ENST00000616289 CEP152O94986 1710 aa16.89■□□□□ 0.29
PDLIM2-219ENST00000616289 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
PDLIM2-219ENST00000616289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.29
PDLIM2-219ENST00000616289 DUOX2Q9NRD8 1548 aa16.87■□□□□ 0.29
PDLIM2-219ENST00000616289 PTPN23Q9H3S7 1636 aa16.87■□□□□ 0.29
PDLIM2-219ENST00000616289 DISP3Q9P2K9 1392 aa16.87■□□□□ 0.29
PDLIM2-219ENST00000616289 DEPDC5O75140 1603 aa16.86■□□□□ 0.29
PDLIM2-219ENST00000616289 ERVK-7P63135 1459 aa16.86■□□□□ 0.29
PDLIM2-219ENST00000616289 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
PDLIM2-219ENST00000616289 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-219ENST00000616289 CPS1P31327 1500 aa16.84■□□□□ 0.29
PDLIM2-219ENST00000616289 VWDEQ8N2E2 1590 aa16.84■□□□□ 0.29
PDLIM2-219ENST00000616289 UBAP1LF5GYI3 381 aa16.83■□□□□ 0.28
PDLIM2-219ENST00000616289 ABCC5O15440 1437 aa16.83■□□□□ 0.28
PDLIM2-219ENST00000616289 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
PDLIM2-219ENST00000616289 IQGAP1P46940 1657 aa16.82■□□□□ 0.28
PDLIM2-219ENST00000616289 MED14O60244 1454 aa16.82■□□□□ 0.28
PDLIM2-219ENST00000616289 THEMISQ8N1K5 641 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-219ENST00000616289 NPHP4O75161 1426 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-219ENST00000616289 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
PDLIM2-219ENST00000616289 ANKLE2Q86XL3 938 aa16.81■□□□□ 0.28
PDLIM2-219ENST00000616289 UBR1Q8IWV7 1749 aa16.81■□□□□ 0.28
PDLIM2-219ENST00000616289 DAPK1P53355 1430 aa16.8■□□□□ 0.28
PDLIM2-219ENST00000616289 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
PDLIM2-219ENST00000616289 ILDR2Q71H61 639 aa16.8■□□□□ 0.28
PDLIM2-219ENST00000616289 CFAP65Q6ZU64 1925 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-219ENST00000616289 APLP2Q06481 763 aa16.77■□□□□ 0.28
PDLIM2-219ENST00000616289 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
PDLIM2-219ENST00000616289 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
PDLIM2-219ENST00000616289 STRCP1A6NGW2 1772 aa16.76■□□□□ 0.27
PDLIM2-219ENST00000616289 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
PDLIM2-219ENST00000616289 PIK3C2BO00750 1634 aa16.73■□□□□ 0.27
PDLIM2-219ENST00000616289 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
PDLIM2-219ENST00000616289 SYNMO15061 1565 aa16.72■□□□□ 0.27
PDLIM2-219ENST00000616289 SLIT1O75093 1534 aa16.72■□□□□ 0.27
PDLIM2-219ENST00000616289 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
PDLIM2-219ENST00000616289 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-219ENST00000616289 PIP4K2BP78356 416 aa16.71■□□□□ 0.27
PDLIM2-219ENST00000616289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDLIM2-219ENST00000616289 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.27
PDLIM2-219ENST00000616289 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
PDLIM2-219ENST00000616289 TOM1O60784 492 aa16.7■□□□□ 0.26
PDLIM2-219ENST00000616289 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
PDLIM2-219ENST00000616289 LRRC7Q96NW7 1537 aa16.7■□□□□ 0.26
PDLIM2-219ENST00000616289 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
PDLIM2-219ENST00000616289 KANK1Q14678 1352 aa16.69■□□□□ 0.26
PDLIM2-219ENST00000616289 EFCAB6Q5THR3 1501 aa16.68■□□□□ 0.26
PDLIM2-219ENST00000616289 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-219ENST00000616289 LTKP29376 864 aa16.67■□□□□ 0.26
PDLIM2-219ENST00000616289 HSPA1LP34931 641 aa16.67■□□□□ 0.26
PDLIM2-219ENST00000616289 SOCS7O14512 581 aa16.66■□□□□ 0.26
PDLIM2-219ENST00000616289 MED1Q15648 1581 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-219ENST00000616289 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
PDLIM2-219ENST00000616289 TMEM2Q9UHN6 1383 aa16.64■□□□□ 0.25
PDLIM2-219ENST00000616289 XIRP1Q702N8 1843 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-219ENST00000616289 NOS1P29475 1434 aa16.62■□□□□ 0.25
PDLIM2-219ENST00000616289 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
PDLIM2-219ENST00000616289 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-219ENST00000616289 IDI1Q13907 227 aa16.6■□□□□ 0.25
PDLIM2-219ENST00000616289 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
PDLIM2-219ENST00000616289 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
PDLIM2-219ENST00000616289 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
PDLIM2-219ENST00000616289 TET3O43151 1660 aa16.59■□□□□ 0.25
PDLIM2-219ENST00000616289 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-219ENST00000616289 UNC13BO14795 1591 aa16.58■□□□□ 0.24
PDLIM2-219ENST00000616289 GCC2Q8IWJ2 1684 aa16.56■□□□□ 0.24
PDLIM2-219ENST00000616289 MYO5BQ9ULV0 1848 aa16.54■□□□□ 0.24
PDLIM2-219ENST00000616289 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-219ENST00000616289 NWD1Q149M9 1564 aa16.53■□□□□ 0.24
PDLIM2-219ENST00000616289 SLC52A1Q9NWF4 448 aa16.52■□□□□ 0.24
PDLIM2-219ENST00000616289 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
PDLIM2-219ENST00000616289 E9PCH4 1651 aa16.51■□□□□ 0.23
PDLIM2-219ENST00000616289 SLC26A8Q96RN1 970 aa16.51■□□□□ 0.23
PDLIM2-219ENST00000616289 ZFYVE9O95405 1425 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms