RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CC2D1BQ5T0F9 858 aaKnown RBP11.47□□□□□ -0.57
COL12A1-211ENST00000615798 RRP9O43818 475 aaKnown RBP11.46□□□□□ -0.57
COL12A1-211ENST00000615798 BCCIPQ9P287 314 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL12A1-211ENST00000615798 NGEFQ8N5V2 710 aa11.46□□□□□ -0.57
COL12A1-211ENST00000615798 RGS3P49796 1198 aa11.46□□□□□ -0.58
COL12A1-211ENST00000615798 SETSIPP0DME0 302 aa11.46□□□□□ -0.58
COL12A1-211ENST00000615798 TSR1Q2NL82 804 aaKnown RBP11.45□□□□□ -0.58
COL12A1-211ENST00000615798 SSR1P43307 286 aaKnown RBP11.45□□□□□ -0.58
COL12A1-211ENST00000615798 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
COL12A1-211ENST00000615798 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
COL12A1-211ENST00000615798 UACAQ9BZF9 1416 aa11.45□□□□□ -0.58
COL12A1-211ENST00000615798 TPM1P09493 284 aa11.44□□□□□ -0.58
COL12A1-211ENST00000615798 CAGE1Q8TC20 777 aa11.44□□□□□ -0.58
COL12A1-211ENST00000615798 KIAA0754O94854 1291 aa11.44□□□□□ -0.58
COL12A1-211ENST00000615798 KANK4Q5T7N3 995 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-211ENST00000615798 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
COL12A1-211ENST00000615798 GOLGA6L7A0A1B0GV03 622 aa11.43□□□□□ -0.58
COL12A1-211ENST00000615798 CFTRP13569 1480 aa11.43□□□□□ -0.58
COL12A1-211ENST00000615798 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
COL12A1-211ENST00000615798 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
COL12A1-211ENST00000615798 KIF16BQ96L93 1317 aa11.43□□□□□ -0.58
COL12A1-211ENST00000615798 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
COL12A1-211ENST00000615798 TCERG1O14776 1098 aaKnown RBP11.42□□□□□ -0.58
COL12A1-211ENST00000615798 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
COL12A1-211ENST00000615798 LRRC9Q6ZRR7 1453 aa11.42□□□□□ -0.58
COL12A1-211ENST00000615798 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
COL12A1-211ENST00000615798 FANCD2Q9BXW9 1451 aa11.42□□□□□ -0.58
COL12A1-211ENST00000615798 IRX3P78415 501 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-211ENST00000615798 MYOM3Q5VTT5 1437 aa11.42□□□□□ -0.58
COL12A1-211ENST00000615798 IPO9Q96P70 1041 aaKnown RBP11.42□□□□□ -0.58
COL12A1-211ENST00000615798 ERCC4Q92889 916 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-211ENST00000615798 KIF3AQ9Y496 699 aa11.42□□□□□ -0.58
COL12A1-211ENST00000615798 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
COL12A1-211ENST00000615798 PDIA4P13667 645 aaKnown RBP11.41□□□□□ -0.58
COL12A1-211ENST00000615798 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
COL12A1-211ENST00000615798 SKOR2Q2VWA4 1001 aaPredicted RBP11.4□□□□□ -0.58
COL12A1-211ENST00000615798 CHMP3Q9Y3E7 222 aa11.4□□□□□ -0.58
COL12A1-211ENST00000615798 SEPT11Q9NVA2 429 aaKnown RBP11.4□□□□□ -0.58
COL12A1-211ENST00000615798 GOLGA6L10A6NI86 522 aa11.4□□□□□ -0.58
COL12A1-211ENST00000615798 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
COL12A1-211ENST00000615798 DIAPH3Q9NSV4 1193 aa11.4□□□□□ -0.58
COL12A1-211ENST00000615798 FGD6Q6ZV73 1430 aa11.4□□□□□ -0.58
COL12A1-211ENST00000615798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.59
COL12A1-211ENST00000615798 GSE1Q14687 1217 aa11.39□□□□□ -0.59
COL12A1-211ENST00000615798 ZBED9Q6R2W3 1325 aa11.39□□□□□ -0.59
COL12A1-211ENST00000615798 KIF15Q9NS87 1388 aa11.39□□□□□ -0.59
COL12A1-211ENST00000615798 ZNF592Q92610 1267 aa11.39□□□□□ -0.59
COL12A1-211ENST00000615798 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
COL12A1-211ENST00000615798 CLASRPQ8N2M8 674 aaKnown RBP11.38□□□□□ -0.59
COL12A1-211ENST00000615798 MNS1Q8NEH6 495 aa11.38□□□□□ -0.59
COL12A1-211ENST00000615798 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
COL12A1-211ENST00000615798 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
COL12A1-211ENST00000615798 LMOD2Q6P5Q4 547 aa11.38□□□□□ -0.59
COL12A1-211ENST00000615798 EHBP1L1Q8N3D4 1523 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 CLGNO14967 610 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 SPATA24Q86W54 205 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 FHOD3Q2V2M9 1422 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL12A1-211ENST00000615798 NLRP13Q86W25 1043 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-211ENST00000615798 TMCO5BA8MYB1 307 aa11.37□□□□□ -0.59
COL12A1-211ENST00000615798 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL12A1-211ENST00000615798 GOLGA6L19H0YKK7 550 aa11.36□□□□□ -0.59
COL12A1-211ENST00000615798 MIA2Q96PC5 1412 aa11.36□□□□□ -0.59
COL12A1-211ENST00000615798 TIAM1Q13009 1591 aa11.36□□□□□ -0.59
COL12A1-211ENST00000615798 HMGN5P82970 282 aaKnown RBP11.36□□□□□ -0.59
COL12A1-211ENST00000615798 IGF1RP08069 1367 aa11.36□□□□□ -0.59
COL12A1-211ENST00000615798 UBE2Q2Q8WVN8 375 aa11.36□□□□□ -0.59
COL12A1-211ENST00000615798 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL12A1-211ENST00000615798 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
COL12A1-211ENST00000615798 MYO6Q9UM54 1294 aa11.35□□□□□ -0.59
COL12A1-211ENST00000615798 KIAA1211Q6ZU35 1233 aa11.35□□□□□ -0.59
COL12A1-211ENST00000615798 PAIP2Q9BPZ3 127 aaKnown RBP11.35□□□□□ -0.59
COL12A1-211ENST00000615798 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
COL12A1-211ENST00000615798 AAMPQ13685 434 aa11.35□□□□□ -0.59
COL12A1-211ENST00000615798 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
COL12A1-211ENST00000615798 CUL7Q14999 1698 aa11.34□□□□□ -0.59
COL12A1-211ENST00000615798 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-211ENST00000615798 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
COL12A1-211ENST00000615798 GOLGA6L10A0A0M3HER8 536 aa11.34□□□□□ -0.59
COL12A1-211ENST00000615798 CHGAP10645 457 aaKnown RBP11.34□□□□□ -0.59
COL12A1-211ENST00000615798 GPATCH11Q8N954 259 aa11.34□□□□□ -0.59
COL12A1-211ENST00000615798 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-211ENST00000615798 B4GALNT3Q6L9W6 998 aa11.33□□□□□ -0.6
COL12A1-211ENST00000615798 SUDS3Q9H7L9 328 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-211ENST00000615798 DDX11Q96FC9 970 aa11.33□□□□□ -0.6
COL12A1-211ENST00000615798 GAPVD1Q14C86 1478 aa11.33□□□□□ -0.6
COL12A1-211ENST00000615798 NUP155O75694 1391 aa11.33□□□□□ -0.6
COL12A1-211ENST00000615798 FANCIQ9NVI1 1328 aa11.33□□□□□ -0.6
COL12A1-211ENST00000615798 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-211ENST00000615798 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-211ENST00000615798 DCAF11Q8TEB1 546 aa11.32□□□□□ -0.6
COL12A1-211ENST00000615798 IPO7O95373 1038 aaKnown RBP11.32□□□□□ -0.6
COL12A1-211ENST00000615798 HOMER1Q86YM7 354 aa11.31□□□□□ -0.6
COL12A1-211ENST00000615798 MYBBP1AQ9BQG0 1328 aaKnown RBP11.31□□□□□ -0.6
COL12A1-211ENST00000615798 MAPK8IP2Q13387 824 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-211ENST00000615798 CFAP57Q96MR6 1250 aa11.31□□□□□ -0.6
COL12A1-211ENST00000615798 HECW1Q76N89 1606 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms