RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 SPATA31E1Q6ZUB1 1445 aa26.87■■□□□ 1.89
MMP28-204ENST00000615136 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
MMP28-204ENST00000615136 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
MMP28-204ENST00000615136 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
MMP28-204ENST00000615136 CYB5RLQ6IPT4 315 aa26.85■■□□□ 1.89
MMP28-204ENST00000615136 CCDC144AA2RUR9 1427 aa26.84■■□□□ 1.89
MMP28-204ENST00000615136 UHRF1BP1Q6BDS2 1440 aa26.84■■□□□ 1.89
MMP28-204ENST00000615136 MYT1LQ9UL68 1186 aa26.83■■□□□ 1.89
MMP28-204ENST00000615136 KDM2AQ9Y2K7 1162 aa26.83■■□□□ 1.89
MMP28-204ENST00000615136 KIDINS220Q9ULH0 1771 aa26.82■■□□□ 1.88
MMP28-204ENST00000615136 DEPDC5O75140 1603 aa26.82■■□□□ 1.88
MMP28-204ENST00000615136 DCAF11Q8TEB1 546 aa26.81■■□□□ 1.88
MMP28-204ENST00000615136 E9PCH4 1651 aa26.79■■□□□ 1.88
MMP28-204ENST00000615136 ZNF518AQ6AHZ1 1483 aa26.78■■□□□ 1.88
MMP28-204ENST00000615136 ATP10AO60312 1499 aa26.77■■□□□ 1.88
MMP28-204ENST00000615136 RALGAPBQ86X10 1494 aa26.77■■□□□ 1.88
MMP28-204ENST00000615136 DHX29Q7Z478 1369 aaKnown RBP26.76■■□□□ 1.87
MMP28-204ENST00000615136 RGL3Q3MIN7 710 aa26.76■■□□□ 1.87
MMP28-204ENST00000615136 CFAP74Q9C0B2 1584 aa26.76■■□□□ 1.87
MMP28-204ENST00000615136 KIF3BO15066 747 aa26.75■■□□□ 1.87
MMP28-204ENST00000615136 CCDC7Q96M83 1385 aa26.75■■□□□ 1.87
MMP28-204ENST00000615136 POGZQ7Z3K3 1410 aa26.75■■□□□ 1.87
MMP28-204ENST00000615136 USP47Q96K76 1375 aa26.74■■□□□ 1.87
MMP28-204ENST00000615136 KDM5CP41229 1560 aa26.74■■□□□ 1.87
MMP28-204ENST00000615136 MROH1Q8NDA8 1641 aa26.74■■□□□ 1.87
MMP28-204ENST00000615136 VWDEQ8N2E2 1590 aa26.72■■□□□ 1.87
MMP28-204ENST00000615136 A2MP01023 1474 aa26.72■■□□□ 1.87
MMP28-204ENST00000615136 CCER2I3L3R5 266 aa26.72■■□□□ 1.87
MMP28-204ENST00000615136 ANP32CO43423 234 aa26.72■■□□□ 1.87
MMP28-204ENST00000615136 EIF2AK4Q9P2K8 1649 aaKnown RBP26.71■■□□□ 1.87
MMP28-204ENST00000615136 BCORL1Q5H9F3 1711 aa26.71■■□□□ 1.87
MMP28-204ENST00000615136 KIF7Q2M1P5 1343 aa26.69■■□□□ 1.86
MMP28-204ENST00000615136 POLR1AO95602 1720 aaPredicted RBP26.68■■□□□ 1.86
MMP28-204ENST00000615136 PRDM15P57071 1507 aaPredicted RBP26.68■■□□□ 1.86
MMP28-204ENST00000615136 TET3O43151 1660 aa26.68■■□□□ 1.86
MMP28-204ENST00000615136 PRAG1Q86YV5 1406 aa26.67■■□□□ 1.86
MMP28-204ENST00000615136 CARD11Q9BXL7 1154 aa26.66■■□□□ 1.86
MMP28-204ENST00000615136 MAP3K4Q9Y6R4 1608 aa26.66■■□□□ 1.86
MMP28-204ENST00000615136 RAPGEF3O95398 923 aa26.66■■□□□ 1.86
MMP28-204ENST00000615136 CNTLNQ9NXG0 1405 aa26.66■■□□□ 1.86
MMP28-204ENST00000615136 FRMPD1Q5SYB0 1578 aa26.65■■□□□ 1.86
MMP28-204ENST00000615136 NEO1Q92859 1461 aa26.65■■□□□ 1.86
MMP28-204ENST00000615136 MLH3Q9UHC1 1453 aa26.65■■□□□ 1.86
MMP28-204ENST00000615136 HECW2Q9P2P5 1572 aa26.65■■□□□ 1.86
MMP28-204ENST00000615136 SPHKAPQ2M3C7 1700 aa26.64■■□□□ 1.86
MMP28-204ENST00000615136 TRPM1Q7Z4N2 1603 aa26.64■■□□□ 1.86
MMP28-204ENST00000615136 TRPM2O94759 1503 aa26.64■■□□□ 1.85
MMP28-204ENST00000615136 KANK1Q14678 1352 aa26.63■■□□□ 1.85
MMP28-204ENST00000615136 PTPRTO14522 1441 aa26.63■■□□□ 1.85
MMP28-204ENST00000615136 ABCA6Q8N139 1617 aa26.62■■□□□ 1.85
MMP28-204ENST00000615136 CLTCL1P53675 1640 aa26.61■■□□□ 1.85
MMP28-204ENST00000615136 ROCK2O75116 1388 aaKnown RBP26.6■■□□□ 1.85
MMP28-204ENST00000615136 NBPF1Q3BBV0 1214 aa26.6■■□□□ 1.85
MMP28-204ENST00000615136 GLI2P10070 1586 aa26.58■■□□□ 1.84
MMP28-204ENST00000615136 RNF17Q9BXT8 1623 aaKnown RBP26.57■■□□□ 1.84
MMP28-204ENST00000615136 CEP152O94986 1710 aa26.56■■□□□ 1.84
MMP28-204ENST00000615136 PPRC1Q5VV67 1664 aaKnown RBP26.56■■□□□ 1.84
MMP28-204ENST00000615136 ST20-MTHFSA0A0A6YYL1 179 aa26.55■■□□□ 1.84
MMP28-204ENST00000615136 RICTORQ6R327 1708 aa26.55■■□□□ 1.84
MMP28-204ENST00000615136 EFCAB6Q5THR3 1501 aa26.54■■□□□ 1.84
MMP28-204ENST00000615136 SUPT16HQ9Y5B9 1047 aaKnown RBP26.54■■□□□ 1.84
MMP28-204ENST00000615136 UGGT1Q9NYU2 1555 aa26.54■■□□□ 1.84
MMP28-204ENST00000615136 DIP2BQ9P265 1576 aa26.53■■□□□ 1.84
MMP28-204ENST00000615136 FAM69CQ0P6D2 419 aa26.52■■□□□ 1.84
MMP28-204ENST00000615136 POLR3GLQ9BT43 218 aa26.51■■□□□ 1.83
MMP28-204ENST00000615136 DIP2CQ9Y2E4 1556 aa26.5■■□□□ 1.83
MMP28-204ENST00000615136 LMTK2Q8IWU2 1503 aa26.5■■□□□ 1.83
MMP28-204ENST00000615136 GGT6Q6P531 493 aa26.49■■□□□ 1.83
MMP28-204ENST00000615136 GPRASP1Q5JY77 1395 aa26.49■■□□□ 1.83
MMP28-204ENST00000615136 YEATS2Q9ULM3 1422 aa26.47■■□□□ 1.83
MMP28-204ENST00000615136 MADDQ8WXG6 1647 aa26.46■■□□□ 1.83
MMP28-204ENST00000615136 TSPOAP1O95153 1857 aa26.46■■□□□ 1.83
MMP28-204ENST00000615136 LAMC1P11047 1609 aa26.44■■□□□ 1.82
MMP28-204ENST00000615136 PRKRIP1Q9H875 184 aaPredicted RBP26.44■■□□□ 1.82
MMP28-204ENST00000615136 CCDC184Q52MB2 194 aa26.43■■□□□ 1.82
MMP28-204ENST00000615136 DNAJC5Q9H3Z4 198 aa26.43■■□□□ 1.82
MMP28-204ENST00000615136 ARID4BQ4LE39 1312 aaPredicted RBP26.42■■□□□ 1.82
MMP28-204ENST00000615136 NPATQ14207 1427 aa26.42■■□□□ 1.82
MMP28-204ENST00000615136 CFAP65Q6ZU64 1925 aaKnown RBP26.41■■□□□ 1.82
MMP28-204ENST00000615136 ABCC3O15438 1527 aa26.4■■□□□ 1.82
MMP28-204ENST00000615136 MROH2AA6NES4 1674 aa26.39■■□□□ 1.81
MMP28-204ENST00000615136 WASHC2CQ9Y4E1 1318 aa26.37■■□□□ 1.81
MMP28-204ENST00000615136 KIF1BO60333 1816 aa26.36■■□□□ 1.81
MMP28-204ENST00000615136 NEURL4Q96JN8 1562 aa26.35■■□□□ 1.81
MMP28-204ENST00000615136 TESK2Q96S53 571 aa26.34■■□□□ 1.81
MMP28-204ENST00000615136 CAMSAP1Q5T5Y3 1602 aa26.34■■□□□ 1.81
MMP28-204ENST00000615136 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.81
MMP28-204ENST00000615136 CNGB1Q14028 1251 aaPredicted RBP26.32■■□□□ 1.8
MMP28-204ENST00000615136 ZMYM4Q5VZL5 1548 aa26.32■■□□□ 1.8
MMP28-204ENST00000615136 DISP3Q9P2K9 1392 aa26.31■■□□□ 1.8
MMP28-204ENST00000615136 IFT172Q9UG01 1749 aa26.3■■□□□ 1.8
MMP28-204ENST00000615136 IQGAP1P46940 1657 aa26.29■■□□□ 1.8
MMP28-204ENST00000615136 ADGRF5Q8IZF2 1346 aa26.29■■□□□ 1.8
MMP28-204ENST00000615136 ADGRB3O60242 1522 aa26.28■■□□□ 1.8
MMP28-204ENST00000615136 KIF13AQ9H1H9 1805 aa26.28■■□□□ 1.8
MMP28-204ENST00000615136 COL17A1Q9UMD9 1497 aaPredicted RBP26.28■■□□□ 1.8
MMP28-204ENST00000615136 STAC3Q96MF2 364 aa26.27■■□□□ 1.8
MMP28-204ENST00000615136 MYOM2P54296 1465 aa26.25■■□□□ 1.79
MMP28-204ENST00000615136 CHGAP10645 457 aaKnown RBP26.25■■□□□ 1.79
MMP28-204ENST00000615136 NOS1P29475 1434 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms