RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 ARHGAP5Q13017 1502 aa11.95□□□□□ -0.5
FAM228B-209ENST00000615135 VWDEQ8N2E2 1590 aa11.93□□□□□ -0.5
FAM228B-209ENST00000615135 NEURL4Q96JN8 1562 aa11.93□□□□□ -0.5
FAM228B-209ENST00000615135 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
FAM228B-209ENST00000615135 A2ML1A8K2U0 1454 aa11.93□□□□□ -0.5
FAM228B-209ENST00000615135 DNMT1P26358 1616 aaKnown RBP11.93□□□□□ -0.5
FAM228B-209ENST00000615135 KIF14Q15058 1648 aa11.93□□□□□ -0.5
FAM228B-209ENST00000615135 CDK11AQ9UQ88 783 aaPredicted RBP11.92□□□□□ -0.5
FAM228B-209ENST00000615135 ABCC1P33527 1531 aa11.91□□□□□ -0.5
FAM228B-209ENST00000615135 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
FAM228B-209ENST00000615135 POLR1AO95602 1720 aaPredicted RBP11.9□□□□□ -0.5
FAM228B-209ENST00000615135 DSG3P32926 999 aa11.9□□□□□ -0.5
FAM228B-209ENST00000615135 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
FAM228B-209ENST00000615135 CLTCQ00610 1675 aaKnown RBP11.9□□□□□ -0.5
FAM228B-209ENST00000615135 ITSN2Q9NZM3 1697 aa11.89□□□□□ -0.51
FAM228B-209ENST00000615135 MED14O60244 1454 aa11.88□□□□□ -0.51
FAM228B-209ENST00000615135 RANGAP1P46060 587 aaPredicted RBP11.87□□□□□ -0.51
FAM228B-209ENST00000615135 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
FAM228B-209ENST00000615135 ANKLE2Q86XL3 938 aa11.86□□□□□ -0.51
FAM228B-209ENST00000615135 PLXNC1O60486 1568 aa11.86□□□□□ -0.51
FAM228B-209ENST00000615135 SAMD9LQ8IVG5 1584 aa11.85□□□□□ -0.51
FAM228B-209ENST00000615135 AMER1Q5JTC6 1135 aaPredicted RBP11.85□□□□□ -0.51
FAM228B-209ENST00000615135 PREX2Q70Z35 1606 aa11.85□□□□□ -0.51
FAM228B-209ENST00000615135 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
FAM228B-209ENST00000615135 CLIP1P30622 1438 aa11.85□□□□□ -0.51
FAM228B-209ENST00000615135 DEPDC5O75140 1603 aa11.84□□□□□ -0.51
FAM228B-209ENST00000615135 NPHP4O75161 1426 aaPredicted RBP11.83□□□□□ -0.52
FAM228B-209ENST00000615135 FMN1Q68DA7 1419 aa11.83□□□□□ -0.52
FAM228B-209ENST00000615135 STRCP1A6NGW2 1772 aa11.82□□□□□ -0.52
FAM228B-209ENST00000615135 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
FAM228B-209ENST00000615135 UPF1Q92900 1129 aaKnown RBP eCLIP11.82□□□□□ -0.52
FAM228B-209ENST00000615135 A2MP01023 1474 aa11.82□□□□□ -0.52
FAM228B-209ENST00000615135 SYNMO15061 1565 aa11.81□□□□□ -0.52
FAM228B-209ENST00000615135 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
FAM228B-209ENST00000615135 GGT6Q6P531 493 aa11.81□□□□□ -0.52
FAM228B-209ENST00000615135 SPAG9O60271 1321 aaKnown RBP11.81□□□□□ -0.52
FAM228B-209ENST00000615135 TNRQ92752 1358 aa11.8□□□□□ -0.52
FAM228B-209ENST00000615135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
FAM228B-209ENST00000615135 SETD1AO15047 1707 aaKnown RBP11.8□□□□□ -0.52
FAM228B-209ENST00000615135 ATP7AQ04656 1500 aa11.78□□□□□ -0.52
FAM228B-209ENST00000615135 PROM2Q8N271 834 aa11.78□□□□□ -0.52
FAM228B-209ENST00000615135 ATP1B4Q9UN42 357 aaPredicted RBP11.78□□□□□ -0.52
FAM228B-209ENST00000615135 IQGAP1P46940 1657 aa11.78□□□□□ -0.52
FAM228B-209ENST00000615135 INO80Q9ULG1 1556 aaPredicted RBP11.77□□□□□ -0.53
FAM228B-209ENST00000615135 FBXO31Q5XUX0 539 aaPredicted RBP11.77□□□□□ -0.53
FAM228B-209ENST00000615135 CDC42BPAQ5VT25 1732 aa11.77□□□□□ -0.53
FAM228B-209ENST00000615135 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.53
FAM228B-209ENST00000615135 PZPP20742 1482 aa11.76□□□□□ -0.53
FAM228B-209ENST00000615135 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
FAM228B-209ENST00000615135 EEA1Q15075 1411 aa11.75□□□□□ -0.53
FAM228B-209ENST00000615135 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
FAM228B-209ENST00000615135 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
FAM228B-209ENST00000615135 LRRIQ1Q96JM4 1722 aa11.74□□□□□ -0.53
FAM228B-209ENST00000615135 HNRNPMP52272 730 aaKnown RBP eCLIP11.74□□□□□ -0.53
FAM228B-209ENST00000615135 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
FAM228B-209ENST00000615135 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
FAM228B-209ENST00000615135 XIRP1Q702N8 1843 aaKnown RBP11.73□□□□□ -0.53
FAM228B-209ENST00000615135 ADGBQ8N7X0 1667 aa11.73□□□□□ -0.53
FAM228B-209ENST00000615135 ZC3H13Q5T200 1668 aaKnown RBP11.71□□□□□ -0.53
FAM228B-209ENST00000615135 PLEKHH2Q8IVE3 1493 aa11.71□□□□□ -0.53
FAM228B-209ENST00000615135 ARHGAP35Q9NRY4 1499 aa11.71□□□□□ -0.53
FAM228B-209ENST00000615135 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
FAM228B-209ENST00000615135 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
FAM228B-209ENST00000615135 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
FAM228B-209ENST00000615135 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
FAM228B-209ENST00000615135 DHX29Q7Z478 1369 aaKnown RBP11.69□□□□□ -0.54
FAM228B-209ENST00000615135 RTEL1-TNFRSF6BF6WH68 1400 aa11.68□□□□□ -0.54
FAM228B-209ENST00000615135 CCDC18Q5T9S5 1454 aa11.67□□□□□ -0.54
FAM228B-209ENST00000615135 SRCAPQ6ZRS2 3230 aa11.67□□□□□ -0.54
FAM228B-209ENST00000615135 JCADQ9P266 1359 aa11.67□□□□□ -0.54
FAM228B-209ENST00000615135 ROBO1Q9Y6N7 1651 aa11.66□□□□□ -0.54
FAM228B-209ENST00000615135 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
FAM228B-209ENST00000615135 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
FAM228B-209ENST00000615135 WASHC2CQ9Y4E1 1318 aa11.65□□□□□ -0.54
FAM228B-209ENST00000615135 CDK12Q9NYV4 1490 aaPredicted RBP11.65□□□□□ -0.54
FAM228B-209ENST00000615135 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
FAM228B-209ENST00000615135 KIF3BO15066 747 aa11.64□□□□□ -0.55
FAM228B-209ENST00000615135 CFDP1Q9UEE9 299 aaPredicted RBP11.64□□□□□ -0.55
FAM228B-209ENST00000615135 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
FAM228B-209ENST00000615135 SCAF11Q99590 1463 aaKnown RBP11.63□□□□□ -0.55
FAM228B-209ENST00000615135 LOC105371045A0A1W2PR82 267 aa11.63□□□□□ -0.55
FAM228B-209ENST00000615135 TRIM52Q96A61 297 aa11.63□□□□□ -0.55
FAM228B-209ENST00000615135 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
FAM228B-209ENST00000615135 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
FAM228B-209ENST00000615135 LTKP29376 864 aa11.62□□□□□ -0.55
FAM228B-209ENST00000615135 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
FAM228B-209ENST00000615135 TMEM94Q12767 1356 aa11.62□□□□□ -0.55
FAM228B-209ENST00000615135 SPATA31A6Q5VVP1 1343 aa11.61□□□□□ -0.55
FAM228B-209ENST00000615135 SLIT1O75093 1534 aa11.61□□□□□ -0.55
FAM228B-209ENST00000615135 RXRBP28702 533 aa11.61□□□□□ -0.55
FAM228B-209ENST00000615135 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
FAM228B-209ENST00000615135 MAP3K1Q13233 1512 aa11.6□□□□□ -0.55
FAM228B-209ENST00000615135 LRP6O75581 1613 aa11.6□□□□□ -0.55
FAM228B-209ENST00000615135 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
FAM228B-209ENST00000615135 UBR1Q8IWV7 1749 aa11.6□□□□□ -0.55
FAM228B-209ENST00000615135 FGD6Q6ZV73 1430 aa11.6□□□□□ -0.55
FAM228B-209ENST00000615135 KCNA6P17658 529 aa11.59□□□□□ -0.55
FAM228B-209ENST00000615135 TXNDC2Q86VQ3 553 aa11.59□□□□□ -0.55
FAM228B-209ENST00000615135 PHLPP1O60346 1717 aa11.59□□□□□ -0.55
FAM228B-209ENST00000615135 SLAIN2Q9P270 581 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms