RNA–Protein interactions for RNA: ENST00000614059.4

RPS6KC1-208, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-208ENST00000614059 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
RPS6KC1-208ENST00000614059 ERICH3Q5RHP9 1530 aa17.53■□□□□ 0.4
RPS6KC1-208ENST00000614059 NFKBIBQ15653 356 aa17.53■□□□□ 0.4
RPS6KC1-208ENST00000614059 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
RPS6KC1-208ENST00000614059 USP47Q96K76 1375 aa17.53■□□□□ 0.4
RPS6KC1-208ENST00000614059 IGF1RP08069 1367 aa17.52■□□□□ 0.4
RPS6KC1-208ENST00000614059 ANKRD30AQ9BXX3 1397 aa17.52■□□□□ 0.4
RPS6KC1-208ENST00000614059 CDK11BP21127 795 aaKnown RBP17.52■□□□□ 0.4
RPS6KC1-208ENST00000614059 MCCP23508 829 aa17.52■□□□□ 0.4
RPS6KC1-208ENST00000614059 BRPF3Q9ULD4 1205 aa17.52■□□□□ 0.39
RPS6KC1-208ENST00000614059 KIAA2012Q0VF49 1180 aa17.51■□□□□ 0.39
RPS6KC1-208ENST00000614059 TRAK1Q9UPV9 953 aa17.5■□□□□ 0.39
RPS6KC1-208ENST00000614059 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
RPS6KC1-208ENST00000614059 SLC4A10Q6U841 1118 aa17.49■□□□□ 0.39
RPS6KC1-208ENST00000614059 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
RPS6KC1-208ENST00000614059 TULP1O00294 542 aaPredicted RBP17.49■□□□□ 0.39
RPS6KC1-208ENST00000614059 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
RPS6KC1-208ENST00000614059 KIF3BO15066 747 aa17.48■□□□□ 0.39
RPS6KC1-208ENST00000614059 CCDC7Q96M83 1385 aa17.47■□□□□ 0.39
RPS6KC1-208ENST00000614059 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
RPS6KC1-208ENST00000614059 TRIM6-TRIM34B2RNG4 842 aa17.47■□□□□ 0.39
RPS6KC1-208ENST00000614059 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
RPS6KC1-208ENST00000614059 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.38
RPS6KC1-208ENST00000614059 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.38
RPS6KC1-208ENST00000614059 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.38
RPS6KC1-208ENST00000614059 RSPH6AQ9H0K4 717 aa17.45■□□□□ 0.38
RPS6KC1-208ENST00000614059 MSH5O43196 834 aa17.45■□□□□ 0.38
RPS6KC1-208ENST00000614059 CUX1P39880 1505 aa17.45■□□□□ 0.38
RPS6KC1-208ENST00000614059 LRRC9Q6ZRR7 1453 aa17.44■□□□□ 0.38
RPS6KC1-208ENST00000614059 KANK1Q14678 1352 aa17.44■□□□□ 0.38
RPS6KC1-208ENST00000614059 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
RPS6KC1-208ENST00000614059 NRDCO43847 1150 aa17.43■□□□□ 0.38
RPS6KC1-208ENST00000614059 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
RPS6KC1-208ENST00000614059 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
RPS6KC1-208ENST00000614059 NUTM2FA1L443 756 aa17.41■□□□□ 0.38
RPS6KC1-208ENST00000614059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.41■□□□□ 0.38
RPS6KC1-208ENST00000614059 PANK1Q8TE04 598 aa17.41■□□□□ 0.38
RPS6KC1-208ENST00000614059 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
RPS6KC1-208ENST00000614059 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
RPS6KC1-208ENST00000614059 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
RPS6KC1-208ENST00000614059 GOLGA6L6A8MZA4 724 aa17.4■□□□□ 0.38
RPS6KC1-208ENST00000614059 E9PSI1 815 aa17.4■□□□□ 0.38
RPS6KC1-208ENST00000614059 HAP1P54257 671 aaPredicted RBP17.4■□□□□ 0.38
RPS6KC1-208ENST00000614059 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
RPS6KC1-208ENST00000614059 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
RPS6KC1-208ENST00000614059 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
RPS6KC1-208ENST00000614059 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
RPS6KC1-208ENST00000614059 PEG3Q9GZU2 1588 aa17.37■□□□□ 0.37
RPS6KC1-208ENST00000614059 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
RPS6KC1-208ENST00000614059 SKAP1Q86WV1 359 aa17.36■□□□□ 0.37
RPS6KC1-208ENST00000614059 SYAP1Q96A49 352 aaPredicted RBP17.36■□□□□ 0.37
RPS6KC1-208ENST00000614059 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
RPS6KC1-208ENST00000614059 PTMSP20962 102 aa17.36■□□□□ 0.37
RPS6KC1-208ENST00000614059 LNPKQ9C0E8 428 aa17.36■□□□□ 0.37
RPS6KC1-208ENST00000614059 FAM13BQ9NYF5 915 aa17.35■□□□□ 0.37
RPS6KC1-208ENST00000614059 NCAPD3P42695 1498 aa17.34■□□□□ 0.37
RPS6KC1-208ENST00000614059 ST18O60284 1047 aa17.34■□□□□ 0.37
RPS6KC1-208ENST00000614059 CNTLNQ9NXG0 1405 aa17.33■□□□□ 0.37
RPS6KC1-208ENST00000614059 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.36
RPS6KC1-208ENST00000614059 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
RPS6KC1-208ENST00000614059 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.36
RPS6KC1-208ENST00000614059 RILPL2Q969X0 211 aa17.33■□□□□ 0.36
RPS6KC1-208ENST00000614059 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.36
RPS6KC1-208ENST00000614059 TIAM1Q13009 1591 aa17.33■□□□□ 0.36
RPS6KC1-208ENST00000614059 CFTRP13569 1480 aa17.31■□□□□ 0.36
RPS6KC1-208ENST00000614059 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
RPS6KC1-208ENST00000614059 HMMRO75330 724 aa17.3■□□□□ 0.36
RPS6KC1-208ENST00000614059 DZIP1LQ8IYY4 767 aaKnown RBP17.3■□□□□ 0.36
RPS6KC1-208ENST00000614059 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
RPS6KC1-208ENST00000614059 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
RPS6KC1-208ENST00000614059 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
RPS6KC1-208ENST00000614059 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
RPS6KC1-208ENST00000614059 LTV1Q96GA3 475 aaPredicted RBP17.29■□□□□ 0.36
RPS6KC1-208ENST00000614059 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
RPS6KC1-208ENST00000614059 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
RPS6KC1-208ENST00000614059 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
RPS6KC1-208ENST00000614059 SPAG9O60271 1321 aaKnown RBP17.28■□□□□ 0.36
RPS6KC1-208ENST00000614059 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
RPS6KC1-208ENST00000614059 UACAQ9BZF9 1416 aa17.28■□□□□ 0.36
RPS6KC1-208ENST00000614059 GNL2Q13823 731 aaKnown RBP17.27■□□□□ 0.36
RPS6KC1-208ENST00000614059 PNISRQ8TF01 805 aaKnown RBP17.27■□□□□ 0.36
RPS6KC1-208ENST00000614059 CARMIL2Q6F5E8 1435 aa17.27■□□□□ 0.35
RPS6KC1-208ENST00000614059 MAPKBP1O60336 1514 aa17.27■□□□□ 0.35
RPS6KC1-208ENST00000614059 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
RPS6KC1-208ENST00000614059 FAM43AQ8N2R8 423 aa17.26■□□□□ 0.35
RPS6KC1-208ENST00000614059 BCAR3O75815 825 aa17.25■□□□□ 0.35
RPS6KC1-208ENST00000614059 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
RPS6KC1-208ENST00000614059 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.24■□□□□ 0.35
RPS6KC1-208ENST00000614059 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
RPS6KC1-208ENST00000614059 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 RNF214Q8ND24 703 aa17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 DDX19BQ9UMR2 479 aa17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 FANCD2Q9BXW9 1451 aa17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 RIPK4P57078 832 aa17.23■□□□□ 0.35
RPS6KC1-208ENST00000614059 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
RPS6KC1-208ENST00000614059 TRAK2O60296 914 aa17.22■□□□□ 0.35
RPS6KC1-208ENST00000614059 WASHC2CQ9Y4E1 1318 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms