RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 MAST1Q9Y2H9 1570 aa27.24■■□□□ 1.95
SMARCD2-212ENST00000613943 NEFLP07196 543 aa27.24■■□□□ 1.95
SMARCD2-212ENST00000613943 EFCAB2Q5VUJ9 269 aa27.24■■□□□ 1.95
SMARCD2-212ENST00000613943 PLA2R1Q13018 1463 aa27.24■■□□□ 1.95
SMARCD2-212ENST00000613943 POLR1AO95602 1720 aaPredicted RBP27.24■■□□□ 1.95
SMARCD2-212ENST00000613943 DHX29Q7Z478 1369 aaKnown RBP27.23■■□□□ 1.95
SMARCD2-212ENST00000613943 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
SMARCD2-212ENST00000613943 ROCK2O75116 1388 aaKnown RBP27.21■■□□□ 1.95
SMARCD2-212ENST00000613943 UHRF1BP1LA0JNW5 1464 aa27.2■■□□□ 1.95
SMARCD2-212ENST00000613943 UNC13BO14795 1591 aa27.19■■□□□ 1.94
SMARCD2-212ENST00000613943 IRX6P78412 446 aaPredicted RBP27.18■■□□□ 1.94
SMARCD2-212ENST00000613943 PLXNC1O60486 1568 aa27.18■■□□□ 1.94
SMARCD2-212ENST00000613943 NBPF1Q3BBV0 1214 aa27.17■■□□□ 1.94
SMARCD2-212ENST00000613943 ABCC1P33527 1531 aa27.15■■□□□ 1.94
SMARCD2-212ENST00000613943 DUOX2Q9NRD8 1548 aa27.15■■□□□ 1.94
SMARCD2-212ENST00000613943 SENP3-EIF4A1A0A087X0R7 540 aa27.14■■□□□ 1.94
SMARCD2-212ENST00000613943 PRAG1Q86YV5 1406 aa27.12■■□□□ 1.93
SMARCD2-212ENST00000613943 A2MP01023 1474 aa27.11■■□□□ 1.93
SMARCD2-212ENST00000613943 SPAG9O60271 1321 aaKnown RBP27.11■■□□□ 1.93
SMARCD2-212ENST00000613943 TSHZ2Q9NRE2 1034 aa27.11■■□□□ 1.93
SMARCD2-212ENST00000613943 IQGAP3Q86VI3 1631 aa27.1■■□□□ 1.93
SMARCD2-212ENST00000613943 ERBINQ96RT1 1412 aa27.09■■□□□ 1.93
SMARCD2-212ENST00000613943 ARID4BQ4LE39 1312 aaPredicted RBP27.06■■□□□ 1.92
SMARCD2-212ENST00000613943 MAGI2Q86UL8 1455 aa27.04■■□□□ 1.92
SMARCD2-212ENST00000613943 WDR7Q9Y4E6 1490 aa27.04■■□□□ 1.92
SMARCD2-212ENST00000613943 MYT1LQ9UL68 1186 aa27.04■■□□□ 1.92
SMARCD2-212ENST00000613943 TRPM1Q7Z4N2 1603 aa27.03■■□□□ 1.92
SMARCD2-212ENST00000613943 ZBED9Q6R2W3 1325 aa27■■□□□ 1.91
SMARCD2-212ENST00000613943 ZFYVE16Q7Z3T8 1539 aa27■■□□□ 1.91
SMARCD2-212ENST00000613943 FANCAO15360 1455 aa26.99■■□□□ 1.91
SMARCD2-212ENST00000613943 SCAPERQ9BY12 1400 aa26.94■■□□□ 1.9
SMARCD2-212ENST00000613943 ASXL2Q76L83 1435 aa26.93■■□□□ 1.9
SMARCD2-212ENST00000613943 TMC1Q8TDI8 760 aa26.93■■□□□ 1.9
SMARCD2-212ENST00000613943 ATP10AO60312 1499 aa26.93■■□□□ 1.9
SMARCD2-212ENST00000613943 KIF3BO15066 747 aa26.92■■□□□ 1.9
SMARCD2-212ENST00000613943 DISP3Q9P2K9 1392 aa26.92■■□□□ 1.9
SMARCD2-212ENST00000613943 GPRASP1Q5JY77 1395 aa26.92■■□□□ 1.9
SMARCD2-212ENST00000613943 RTEL1-TNFRSF6BF6WH68 1400 aa26.91■■□□□ 1.9
SMARCD2-212ENST00000613943 TESK2Q96S53 571 aa26.91■■□□□ 1.9
SMARCD2-212ENST00000613943 E9PCH4 1651 aa26.9■■□□□ 1.9
SMARCD2-212ENST00000613943 ADGRL1O94910 1474 aa26.9■■□□□ 1.9
SMARCD2-212ENST00000613943 PNISRQ8TF01 805 aaKnown RBP26.89■■□□□ 1.9
SMARCD2-212ENST00000613943 ARAP3Q8WWN8 1544 aa26.89■■□□□ 1.9
SMARCD2-212ENST00000613943 ABCA9Q8IUA7 1624 aa26.88■■□□□ 1.89
SMARCD2-212ENST00000613943 ATP7AQ04656 1500 aa26.88■■□□□ 1.89
SMARCD2-212ENST00000613943 PRDM15P57071 1507 aaPredicted RBP26.86■■□□□ 1.89
SMARCD2-212ENST00000613943 MYBBP1AQ9BQG0 1328 aaKnown RBP26.83■■□□□ 1.89
SMARCD2-212ENST00000613943 COL17A1Q9UMD9 1497 aaPredicted RBP26.82■■□□□ 1.88
SMARCD2-212ENST00000613943 INO80Q9ULG1 1556 aaPredicted RBP26.82■■□□□ 1.88
SMARCD2-212ENST00000613943 CC2D1BQ5T0F9 858 aaKnown RBP26.81■■□□□ 1.88
SMARCD2-212ENST00000613943 OSCARQ8IYS5 282 aa26.81■■□□□ 1.88
SMARCD2-212ENST00000613943 PER1O15534 1290 aaPredicted RBP26.8■■□□□ 1.88
SMARCD2-212ENST00000613943 EIF2AK4Q9P2K8 1649 aaKnown RBP26.79■■□□□ 1.88
SMARCD2-212ENST00000613943 TRPM2O94759 1503 aa26.79■■□□□ 1.88
SMARCD2-212ENST00000613943 RALBP1Q15311 655 aa26.79■■□□□ 1.88
SMARCD2-212ENST00000613943 CLTCL1P53675 1640 aa26.78■■□□□ 1.88
SMARCD2-212ENST00000613943 PANK3Q9H999 370 aa26.78■■□□□ 1.88
SMARCD2-212ENST00000613943 KANK1Q14678 1352 aa26.77■■□□□ 1.88
SMARCD2-212ENST00000613943 DEPDC5O75140 1603 aa26.77■■□□□ 1.88
SMARCD2-212ENST00000613943 PTPRTO14522 1441 aa26.77■■□□□ 1.88
SMARCD2-212ENST00000613943 NPM1P06748 294 aaKnown RBP eCLIP26.76■■□□□ 1.87
SMARCD2-212ENST00000613943 TMF1P82094 1093 aa26.76■■□□□ 1.87
SMARCD2-212ENST00000613943 UGGT1Q9NYU2 1555 aa26.76■■□□□ 1.87
SMARCD2-212ENST00000613943 KTN1Q86UP2 1357 aaKnown RBP26.76■■□□□ 1.87
SMARCD2-212ENST00000613943 SALL2Q9Y467 1007 aaPredicted RBP26.75■■□□□ 1.87
SMARCD2-212ENST00000613943 SPHKAPQ2M3C7 1700 aa26.75■■□□□ 1.87
SMARCD2-212ENST00000613943 LAMC1P11047 1609 aa26.75■■□□□ 1.87
SMARCD2-212ENST00000613943 BRD4O60885 1362 aaPredicted RBP26.74■■□□□ 1.87
SMARCD2-212ENST00000613943 MADDQ8WXG6 1647 aa26.74■■□□□ 1.87
SMARCD2-212ENST00000613943 PARD3Q8TEW0 1356 aa26.73■■□□□ 1.87
SMARCD2-212ENST00000613943 RNF17Q9BXT8 1623 aaKnown RBP26.71■■□□□ 1.87
SMARCD2-212ENST00000613943 TET3O43151 1660 aa26.71■■□□□ 1.87
SMARCD2-212ENST00000613943 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
SMARCD2-212ENST00000613943 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
SMARCD2-212ENST00000613943 MROH1Q8NDA8 1641 aa26.7■■□□□ 1.87
SMARCD2-212ENST00000613943 SMG6Q86US8 1419 aaKnown RBP26.7■■□□□ 1.87
SMARCD2-212ENST00000613943 B4GALNT3Q6L9W6 998 aa26.7■■□□□ 1.86
SMARCD2-212ENST00000613943 VWDEQ8N2E2 1590 aa26.69■■□□□ 1.86
SMARCD2-212ENST00000613943 NLRP13Q86W25 1043 aa26.69■■□□□ 1.86
SMARCD2-212ENST00000613943 CEP152O94986 1710 aa26.68■■□□□ 1.86
SMARCD2-212ENST00000613943 KIDINS220Q9ULH0 1771 aa26.67■■□□□ 1.86
SMARCD2-212ENST00000613943 PPP4R2Q9NY27 417 aa26.66■■□□□ 1.86
SMARCD2-212ENST00000613943 CD109Q6YHK3 1445 aa26.66■■□□□ 1.86
SMARCD2-212ENST00000613943 RBM19Q9Y4C8 960 aaKnown RBP26.65■■□□□ 1.86
SMARCD2-212ENST00000613943 CFAP70Q5T0N1 1121 aa26.64■■□□□ 1.86
SMARCD2-212ENST00000613943 GGT6Q6P531 493 aa26.64■■□□□ 1.86
SMARCD2-212ENST00000613943 ZNF518AQ6AHZ1 1483 aa26.64■■□□□ 1.85
SMARCD2-212ENST00000613943 ADGRF5Q8IZF2 1346 aa26.63■■□□□ 1.85
SMARCD2-212ENST00000613943 CHGAP10645 457 aaKnown RBP26.61■■□□□ 1.85
SMARCD2-212ENST00000613943 SCAF11Q99590 1463 aaKnown RBP26.6■■□□□ 1.85
SMARCD2-212ENST00000613943 RAPGEF3O95398 923 aa26.59■■□□□ 1.85
SMARCD2-212ENST00000613943 IQGAP1P46940 1657 aa26.59■■□□□ 1.85
SMARCD2-212ENST00000613943 ERICH6BQ5W0A0 696 aa26.59■■□□□ 1.85
SMARCD2-212ENST00000613943 EFCAB6Q5THR3 1501 aa26.57■■□□□ 1.84
SMARCD2-212ENST00000613943 PPRC1Q5VV67 1664 aaKnown RBP26.57■■□□□ 1.84
SMARCD2-212ENST00000613943 POGZQ7Z3K3 1410 aa26.56■■□□□ 1.84
SMARCD2-212ENST00000613943 WASHC2CQ9Y4E1 1318 aa26.53■■□□□ 1.84
SMARCD2-212ENST00000613943 KNSTRNQ9Y448 316 aa26.53■■□□□ 1.84
SMARCD2-212ENST00000613943 FRMPD1Q5SYB0 1578 aa26.52■■□□□ 1.84
SMARCD2-212ENST00000613943 CFAP65Q6ZU64 1925 aaKnown RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms