RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 DDX27Q96GQ7 796 aaKnown RBP8.25□□□□□ -1.09
CCL16-206ENST00000613642 STAC3Q96MF2 364 aa8.25□□□□□ -1.09
CCL16-206ENST00000613642 BHMG1C9JSJ3 638 aaPredicted RBP8.24□□□□□ -1.09
CCL16-206ENST00000613642 EVI5O60447 810 aa8.24□□□□□ -1.09
CCL16-206ENST00000613642 ERICH6BQ5W0A0 696 aa8.24□□□□□ -1.09
CCL16-206ENST00000613642 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
CCL16-206ENST00000613642 PTPREP23469 700 aa8.23□□□□□ -1.09
CCL16-206ENST00000613642 TAF7LQ5H9L4 462 aa8.22□□□□□ -1.09
CCL16-206ENST00000613642 ZBED2Q9BTP6 218 aa8.22□□□□□ -1.09
CCL16-206ENST00000613642 ZDHHC16Q969W1 377 aa8.21□□□□□ -1.1
CCL16-206ENST00000613642 EMILIN3Q9NT22 766 aa8.21□□□□□ -1.1
CCL16-206ENST00000613642 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
CCL16-206ENST00000613642 MAP3K9P80192 1104 aa8.2□□□□□ -1.1
CCL16-206ENST00000613642 ADAM33Q9BZ11 813 aa8.2□□□□□ -1.1
CCL16-206ENST00000613642 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
CCL16-206ENST00000613642 CADPS2Q86UW7 1296 aa8.18□□□□□ -1.1
CCL16-206ENST00000613642 ACIN1Q9UKV3 1341 aaKnown RBP8.18□□□□□ -1.1
CCL16-206ENST00000613642 TPRNQ4KMQ1 711 aa8.17□□□□□ -1.1
CCL16-206ENST00000613642 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
CCL16-206ENST00000613642 PTPN5P54829 565 aa8.16□□□□□ -1.1
CCL16-206ENST00000613642 THSD4Q6ZMP0 1018 aa8.16□□□□□ -1.1
CCL16-206ENST00000613642 PCDHGA10Q9Y5H3 936 aa8.16□□□□□ -1.1
CCL16-206ENST00000613642 BRD2P25440 801 aaKnown RBP8.14□□□□□ -1.11
CCL16-206ENST00000613642 MRPL50Q8N5N7 158 aaKnown RBP8.14□□□□□ -1.11
CCL16-206ENST00000613642 PPP1R3GB7ZBB8 358 aa8.13□□□□□ -1.11
CCL16-206ENST00000613642 CAMK2BQ13554 666 aa8.13□□□□□ -1.11
CCL16-206ENST00000613642 IFFO2Q5TF58 517 aa8.13□□□□□ -1.11
CCL16-206ENST00000613642 GOLGA8CPA6NN73 597 aa8.12□□□□□ -1.11
CCL16-206ENST00000613642 PHF14O94880 888 aa8.12□□□□□ -1.11
CCL16-206ENST00000613642 ZNF326Q5BKZ1 582 aaKnown RBP8.12□□□□□ -1.11
CCL16-206ENST00000613642 WNT2BQ93097 391 aa8.12□□□□□ -1.11
CCL16-206ENST00000613642 NBPF3Q9H094 633 aa8.12□□□□□ -1.11
CCL16-206ENST00000613642 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
CCL16-206ENST00000613642 FBXW7Q969H0 707 aa8.11□□□□□ -1.11
CCL16-206ENST00000613642 RABGEF1Q9UJ41 708 aa8.11□□□□□ -1.11
CCL16-206ENST00000613642 COL9A1P20849 921 aa8.1□□□□□ -1.11
CCL16-206ENST00000613642 ZEB1P37275 1124 aaPredicted RBP8.09□□□□□ -1.11
CCL16-206ENST00000613642 FGD1P98174 961 aa8.09□□□□□ -1.11
CCL16-206ENST00000613642 PROX2Q3B8N5 592 aa8.09□□□□□ -1.11
CCL16-206ENST00000613642 CLSPNQ9HAW4 1339 aa8.06□□□□□ -1.12
CCL16-206ENST00000613642 DPYSL4O14531 572 aa8.06□□□□□ -1.12
CCL16-206ENST00000613642 ONECUT3O60422 494 aaPredicted RBP8.06□□□□□ -1.12
CCL16-206ENST00000613642 RGS20O76081 388 aa8.06□□□□□ -1.12
CCL16-206ENST00000613642 EPAS1Q99814 870 aa8.06□□□□□ -1.12
CCL16-206ENST00000613642 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
CCL16-206ENST00000613642 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
CCL16-206ENST00000613642 LAPTM4BQ86VI4 370 aa8.05□□□□□ -1.12
CCL16-206ENST00000613642 CDK11BP21127 795 aaKnown RBP8.04□□□□□ -1.12
CCL16-206ENST00000613642 BBXQ8WY36 941 aaPredicted RBP8.04□□□□□ -1.12
CCL16-206ENST00000613642 CHMP4AQ9BY43 222 aa8.04□□□□□ -1.12
CCL16-206ENST00000613642 A0A0G2JS52 829 aa8.03□□□□□ -1.12
CCL16-206ENST00000613642 HMGB1P09429 215 aaKnown RBP8.03□□□□□ -1.12
CCL16-206ENST00000613642 ANKK1Q8NFD2 765 aa8.03□□□□□ -1.12
CCL16-206ENST00000613642 KIAA1468Q9P260 1216 aa8.03□□□□□ -1.12
CCL16-206ENST00000613642 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.13
CCL16-206ENST00000613642 SOWAHBA6NEL2 793 aa8.01□□□□□ -1.13
CCL16-206ENST00000613642 ZFRQ96KR1 1074 aaKnown RBP8.01□□□□□ -1.13
CCL16-206ENST00000613642 TRIM6-TRIM34B2RNG4 842 aa8□□□□□ -1.13
CCL16-206ENST00000613642 ITGBL1O95965 494 aaPredicted RBP8□□□□□ -1.13
CCL16-206ENST00000613642 BCAMP50895 628 aa7.99□□□□□ -1.13
CCL16-206ENST00000613642 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
CCL16-206ENST00000613642 DDX12PQ92771 950 aa7.99□□□□□ -1.13
CCL16-206ENST00000613642 PDIA6Q15084 440 aa7.98□□□□□ -1.13
CCL16-206ENST00000613642 RSPH4AQ5TD94 716 aa7.98□□□□□ -1.13
CCL16-206ENST00000613642 NYAP1Q6ZVC0 841 aa7.98□□□□□ -1.13
CCL16-206ENST00000613642 RBM33Q96EV2 1170 aaKnown RBP7.98□□□□□ -1.13
CCL16-206ENST00000613642 LOC105371045A0A1W2PR82 267 aa7.97□□□□□ -1.13
CCL16-206ENST00000613642 EN1Q05925 392 aaPredicted RBP7.97□□□□□ -1.13
CCL16-206ENST00000613642 SEPT9Q9UHD8 586 aaPredicted RBP7.97□□□□□ -1.13
CCL16-206ENST00000613642 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
CCL16-206ENST00000613642 WBP1LQ9NX94 342 aa7.96□□□□□ -1.14
CCL16-206ENST00000613642 BCCIPQ9P287 314 aaKnown RBP eCLIP7.96□□□□□ -1.14
CCL16-206ENST00000613642 NISCHQ9Y2I1 1504 aa7.96□□□□□ -1.14
CCL16-206ENST00000613642 SPDYE16A6NNV3 312 aaPredicted RBP7.95□□□□□ -1.14
CCL16-206ENST00000613642 HAP1P54257 671 aaPredicted RBP7.95□□□□□ -1.14
CCL16-206ENST00000613642 SPRYD3Q8NCJ5 442 aa7.95□□□□□ -1.14
CCL16-206ENST00000613642 RSPH6AQ9H0K4 717 aa7.95□□□□□ -1.14
CCL16-206ENST00000613642 PLCB2Q00722 1185 aa7.94□□□□□ -1.14
CCL16-206ENST00000613642 AAMPQ13685 434 aa7.94□□□□□ -1.14
CCL16-206ENST00000613642 NBR1Q14596 966 aa7.94□□□□□ -1.14
CCL16-206ENST00000613642 TSR1Q2NL82 804 aaKnown RBP7.94□□□□□ -1.14
CCL16-206ENST00000613642 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
CCL16-206ENST00000613642 ARIH1Q9Y4X5 557 aaPredicted RBP7.94□□□□□ -1.14
CCL16-206ENST00000613642 MAP3K7O43318 606 aa7.92□□□□□ -1.14
CCL16-206ENST00000613642 TRIM26Q12899 539 aaPredicted RBP7.92□□□□□ -1.14
CCL16-206ENST00000613642 PPARGC1BQ86YN6 1023 aaKnown RBP7.92□□□□□ -1.14
CCL16-206ENST00000613642 IRX2Q9BZI1 471 aaPredicted RBP7.92□□□□□ -1.14
CCL16-206ENST00000613642 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
CCL16-206ENST00000613642 TSR3Q9UJK0 312 aaKnown RBP7.92□□□□□ -1.14
CCL16-206ENST00000613642 SHROOM4Q9ULL8 1493 aa7.92□□□□□ -1.14
CCL16-206ENST00000613642 E2F4Q16254 413 aa7.91□□□□□ -1.14
CCL16-206ENST00000613642 PACS2Q86VP3 889 aa7.91□□□□□ -1.14
CCL16-206ENST00000613642 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.91□□□□□ -1.14
CCL16-206ENST00000613642 PRIM1P49642 420 aaKnown RBP7.9□□□□□ -1.14
CCL16-206ENST00000613642 KCNC4Q03721 635 aa7.9□□□□□ -1.14
CCL16-206ENST00000613642 NEUROD1Q13562 356 aa7.9□□□□□ -1.14
CCL16-206ENST00000613642 LRCH3Q96II8 777 aa7.9□□□□□ -1.14
CCL16-206ENST00000613642 HPS5Q9UPZ3 1129 aa7.9□□□□□ -1.14
CCL16-206ENST00000613642 SALL2Q9Y467 1007 aaPredicted RBP7.9□□□□□ -1.14
CCL16-206ENST00000613642 CDCA7LQ96GN5 454 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms