RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 TSPY4P0CV99 314 aa13.44□□□□□ -0.26
CNTNAP3B-211ENST00000612828 TSPY10P0CW01 314 aa13.44□□□□□ -0.26
CNTNAP3B-211ENST00000612828 NOL8Q76FK4 1167 aaKnown RBP13.44□□□□□ -0.26
CNTNAP3B-211ENST00000612828 WDR78Q5VTH9 848 aa13.43□□□□□ -0.26
CNTNAP3B-211ENST00000612828 ABCC8Q09428 1581 aa13.43□□□□□ -0.26
CNTNAP3B-211ENST00000612828 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 FOXD1Q16676 465 aa13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 TMEM87AQ8NBN3 555 aa13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 MCCP23508 829 aa13.42□□□□□ -0.26
CNTNAP3B-211ENST00000612828 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
CNTNAP3B-211ENST00000612828 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
CNTNAP3B-211ENST00000612828 TEX35Q5T0J7 233 aa13.41□□□□□ -0.26
CNTNAP3B-211ENST00000612828 CCDC70Q6NSX1 233 aa13.41□□□□□ -0.26
CNTNAP3B-211ENST00000612828 ZNF771Q7L3S4 317 aaPredicted RBP13.41□□□□□ -0.26
CNTNAP3B-211ENST00000612828 TPM2P07951 284 aa13.41□□□□□ -0.26
CNTNAP3B-211ENST00000612828 CLASRPQ8N2M8 674 aaKnown RBP13.41□□□□□ -0.26
CNTNAP3B-211ENST00000612828 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
CNTNAP3B-211ENST00000612828 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
CNTNAP3B-211ENST00000612828 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
CNTNAP3B-211ENST00000612828 FLIIQ13045 1269 aa13.4□□□□□ -0.26
CNTNAP3B-211ENST00000612828 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
CNTNAP3B-211ENST00000612828 FOXD4L5Q5VV16 416 aaPredicted RBP13.4□□□□□ -0.26
CNTNAP3B-211ENST00000612828 FOXD4L4Q8WXT5 416 aaPredicted RBP13.4□□□□□ -0.26
CNTNAP3B-211ENST00000612828 GOLGA6L3A6NEY3 463 aa13.39□□□□□ -0.27
CNTNAP3B-211ENST00000612828 CCDC191Q8NCU4 936 aa13.39□□□□□ -0.27
CNTNAP3B-211ENST00000612828 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
CNTNAP3B-211ENST00000612828 ZNF592Q92610 1267 aa13.39□□□□□ -0.27
CNTNAP3B-211ENST00000612828 KAT6BQ8WYB5 2073 aa13.38□□□□□ -0.27
CNTNAP3B-211ENST00000612828 CA8P35219 290 aa13.38□□□□□ -0.27
CNTNAP3B-211ENST00000612828 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
CNTNAP3B-211ENST00000612828 GRIPAP1Q4V328 841 aa13.38□□□□□ -0.27
CNTNAP3B-211ENST00000612828 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
CNTNAP3B-211ENST00000612828 DEKP35659 375 aaKnown RBP13.38□□□□□ -0.27
CNTNAP3B-211ENST00000612828 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
CNTNAP3B-211ENST00000612828 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
CNTNAP3B-211ENST00000612828 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
CNTNAP3B-211ENST00000612828 ZRSR2Q15696 482 aaKnown RBP13.36□□□□□ -0.27
CNTNAP3B-211ENST00000612828 HSCBQ8IWL3 235 aa13.36□□□□□ -0.27
CNTNAP3B-211ENST00000612828 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
CNTNAP3B-211ENST00000612828 U2SURPO15042 1029 aaKnown RBP13.35□□□□□ -0.27
CNTNAP3B-211ENST00000612828 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
CNTNAP3B-211ENST00000612828 RUFY1Q96T51 708 aa13.35□□□□□ -0.27
CNTNAP3B-211ENST00000612828 CCDC34Q96HJ3 373 aa13.35□□□□□ -0.27
CNTNAP3B-211ENST00000612828 FOXD4L6Q3SYB3 417 aaPredicted RBP13.34□□□□□ -0.27
CNTNAP3B-211ENST00000612828 FOXD4L3Q6VB84 417 aaPredicted RBP13.34□□□□□ -0.27
CNTNAP3B-211ENST00000612828 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
CNTNAP3B-211ENST00000612828 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
CNTNAP3B-211ENST00000612828 NEBLO76041 1014 aa13.34□□□□□ -0.27
CNTNAP3B-211ENST00000612828 SF3A1Q15459 793 aaKnown RBP13.34□□□□□ -0.27
CNTNAP3B-211ENST00000612828 CC2D1BQ5T0F9 858 aaKnown RBP13.33□□□□□ -0.28
CNTNAP3B-211ENST00000612828 ZWINTO95229 277 aa13.33□□□□□ -0.28
CNTNAP3B-211ENST00000612828 SEPT7Q16181 437 aaKnown RBP13.33□□□□□ -0.28
CNTNAP3B-211ENST00000612828 ENOX2Q16206 610 aaKnown RBP13.33□□□□□ -0.28
CNTNAP3B-211ENST00000612828 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.28
CNTNAP3B-211ENST00000612828 UQCRHLA0A096LP55 91 aa13.32□□□□□ -0.28
CNTNAP3B-211ENST00000612828 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
CNTNAP3B-211ENST00000612828 EPS15P42566 896 aa13.32□□□□□ -0.28
CNTNAP3B-211ENST00000612828 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
CNTNAP3B-211ENST00000612828 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
CNTNAP3B-211ENST00000612828 SETD5Q9C0A6 1442 aa13.31□□□□□ -0.28
CNTNAP3B-211ENST00000612828 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
CNTNAP3B-211ENST00000612828 SEPT6Q14141 434 aa13.3□□□□□ -0.28
CNTNAP3B-211ENST00000612828 TTLL5Q6EMB2 1281 aa13.3□□□□□ -0.28
CNTNAP3B-211ENST00000612828 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
CNTNAP3B-211ENST00000612828 NEXNQ0ZGT2 675 aa13.29□□□□□ -0.28
CNTNAP3B-211ENST00000612828 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
CNTNAP3B-211ENST00000612828 MFAP1P55081 439 aaKnown RBP13.29□□□□□ -0.28
CNTNAP3B-211ENST00000612828 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 CCDC175P0C221 793 aa13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 AKAP17AQ02040 695 aaKnown RBP13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 HSP90AA2PQ14568 343 aaPredicted RBP13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 H0YHG0 523 aa13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 CLGNO14967 610 aa13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 IKQ13123 557 aaPredicted RBP13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 CFAP53Q96M91 514 aa13.28□□□□□ -0.28
CNTNAP3B-211ENST00000612828 RBM25P49756 843 aaKnown RBP13.27□□□□□ -0.28
CNTNAP3B-211ENST00000612828 CARMIL1Q5VZK9 1371 aa13.27□□□□□ -0.29
CNTNAP3B-211ENST00000612828 TPM1P09493 284 aa13.26□□□□□ -0.29
CNTNAP3B-211ENST00000612828 SERPINA10Q9UK55 444 aa13.26□□□□□ -0.29
CNTNAP3B-211ENST00000612828 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
CNTNAP3B-211ENST00000612828 MLECQ14165 292 aa13.26□□□□□ -0.29
CNTNAP3B-211ENST00000612828 SEPT10Q9P0V9 454 aa13.26□□□□□ -0.29
CNTNAP3B-211ENST00000612828 GPS2Q13227 327 aa13.25□□□□□ -0.29
CNTNAP3B-211ENST00000612828 KDM4AO75164 1064 aa13.25□□□□□ -0.29
CNTNAP3B-211ENST00000612828 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
CNTNAP3B-211ENST00000612828 NOL10Q9BSC4 688 aaKnown RBP13.25□□□□□ -0.29
CNTNAP3B-211ENST00000612828 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
CNTNAP3B-211ENST00000612828 BANK1Q8NDB2 785 aa13.25□□□□□ -0.29
CNTNAP3B-211ENST00000612828 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
CNTNAP3B-211ENST00000612828 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
CNTNAP3B-211ENST00000612828 POGKQ9P215 609 aa13.24□□□□□ -0.29
CNTNAP3B-211ENST00000612828 KNSTRNQ9Y448 316 aa13.24□□□□□ -0.29
CNTNAP3B-211ENST00000612828 UQCRHP07919 91 aa13.24□□□□□ -0.29
CNTNAP3B-211ENST00000612828 CEP63Q96MT8 703 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms