RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 TTC5Q8N0Z6 440 aa18.01■□□□□ 0.47
SYNRG-217ENST00000612223 NOL10Q9BSC4 688 aaKnown RBP18.01■□□□□ 0.47
SYNRG-217ENST00000612223 PSME1Q06323 249 aa18.01■□□□□ 0.47
SYNRG-217ENST00000612223 TCEAL9Q9UHQ7 104 aa18■□□□□ 0.47
SYNRG-217ENST00000612223 OSCARQ8IYS5 282 aa18■□□□□ 0.47
SYNRG-217ENST00000612223 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
SYNRG-217ENST00000612223 CLUAP1Q96AJ1 413 aa17.99■□□□□ 0.47
SYNRG-217ENST00000612223 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
SYNRG-217ENST00000612223 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
SYNRG-217ENST00000612223 COG3Q96JB2 828 aa17.98■□□□□ 0.47
SYNRG-217ENST00000612223 JPH4Q96JJ6 628 aa17.98■□□□□ 0.47
SYNRG-217ENST00000612223 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
SYNRG-217ENST00000612223 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
SYNRG-217ENST00000612223 CCDC34Q96HJ3 373 aa17.97■□□□□ 0.47
SYNRG-217ENST00000612223 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
SYNRG-217ENST00000612223 TPM4P67936 248 aa17.96■□□□□ 0.47
SYNRG-217ENST00000612223 EIF2S2P20042 333 aaKnown RBP17.96■□□□□ 0.47
SYNRG-217ENST00000612223 FAM69CQ0P6D2 419 aa17.96■□□□□ 0.47
SYNRG-217ENST00000612223 TEFQ10587 303 aa17.96■□□□□ 0.47
SYNRG-217ENST00000612223 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
SYNRG-217ENST00000612223 MSNP26038 577 aaKnown RBP17.96■□□□□ 0.46
SYNRG-217ENST00000612223 ELL2O00472 640 aaPredicted RBP17.95■□□□□ 0.46
SYNRG-217ENST00000612223 ATF3P18847 181 aa17.95■□□□□ 0.46
SYNRG-217ENST00000612223 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
SYNRG-217ENST00000612223 AMOTL1Q8IY63 956 aa17.95■□□□□ 0.46
SYNRG-217ENST00000612223 NOP58Q9Y2X3 529 aaKnown RBP17.95■□□□□ 0.46
SYNRG-217ENST00000612223 VPS37DQ86XT2 251 aa17.94■□□□□ 0.46
SYNRG-217ENST00000612223 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
SYNRG-217ENST00000612223 MINK1Q8N4C8 1332 aaPredicted RBP17.94■□□□□ 0.46
SYNRG-217ENST00000612223 PPP1R1BQ9UD71 204 aaPredicted RBP17.93■□□□□ 0.46
SYNRG-217ENST00000612223 RALBP1Q15311 655 aa17.93■□□□□ 0.46
SYNRG-217ENST00000612223 KANK4Q5T7N3 995 aaPredicted RBP17.93■□□□□ 0.46
SYNRG-217ENST00000612223 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
SYNRG-217ENST00000612223 NECTIN2Q92692 538 aa17.92■□□□□ 0.46
SYNRG-217ENST00000612223 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
SYNRG-217ENST00000612223 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
SYNRG-217ENST00000612223 PES1O00541 588 aaKnown RBP17.91■□□□□ 0.46
SYNRG-217ENST00000612223 AKAP17AQ02040 695 aaKnown RBP17.91■□□□□ 0.46
SYNRG-217ENST00000612223 DHX16O60231 1041 aaKnown RBP17.9■□□□□ 0.46
SYNRG-217ENST00000612223 PMFBP1Q8TBY8 1022 aa17.9■□□□□ 0.46
SYNRG-217ENST00000612223 RILPL2Q969X0 211 aa17.89■□□□□ 0.45
SYNRG-217ENST00000612223 SF3A1Q15459 793 aaKnown RBP17.88■□□□□ 0.45
SYNRG-217ENST00000612223 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
SYNRG-217ENST00000612223 FMN1Q68DA7 1419 aa17.88■□□□□ 0.45
SYNRG-217ENST00000612223 NEXNQ0ZGT2 675 aa17.87■□□□□ 0.45
SYNRG-217ENST00000612223 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
SYNRG-217ENST00000612223 RBM33Q96EV2 1170 aaKnown RBP17.87■□□□□ 0.45
SYNRG-217ENST00000612223 GBP4Q96PP9 640 aa17.87■□□□□ 0.45
SYNRG-217ENST00000612223 MYO15BQ96JP2 1530 aa17.87■□□□□ 0.45
SYNRG-217ENST00000612223 GZF1Q9H116 711 aaPredicted RBP17.87■□□□□ 0.45
SYNRG-217ENST00000612223 FOXD4L5Q5VV16 416 aaPredicted RBP17.86■□□□□ 0.45
SYNRG-217ENST00000612223 FOXD4L4Q8WXT5 416 aaPredicted RBP17.86■□□□□ 0.45
SYNRG-217ENST00000612223 SF3B2Q13435 895 aaKnown RBP17.86■□□□□ 0.45
SYNRG-217ENST00000612223 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
SYNRG-217ENST00000612223 SYNE3Q6ZMZ3 975 aa17.85■□□□□ 0.45
SYNRG-217ENST00000612223 APPP05067 770 aa17.85■□□□□ 0.45
SYNRG-217ENST00000612223 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
SYNRG-217ENST00000612223 KIF16BQ96L93 1317 aa17.84■□□□□ 0.45
SYNRG-217ENST00000612223 TPD52L1Q16890 204 aaPredicted RBP17.84■□□□□ 0.45
SYNRG-217ENST00000612223 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
SYNRG-217ENST00000612223 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
SYNRG-217ENST00000612223 NUTM2GQ5VZR2 741 aa17.83■□□□□ 0.45
SYNRG-217ENST00000612223 H3BQV1 296 aa17.83■□□□□ 0.44
SYNRG-217ENST00000612223 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
SYNRG-217ENST00000612223 USP35Q9P2H5 1018 aa17.83■□□□□ 0.44
SYNRG-217ENST00000612223 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
SYNRG-217ENST00000612223 SYAP1Q96A49 352 aaPredicted RBP17.82■□□□□ 0.44
SYNRG-217ENST00000612223 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
SYNRG-217ENST00000612223 NUTM2BA6NNL0 878 aaPredicted RBP17.8■□□□□ 0.44
SYNRG-217ENST00000612223 NUTM2EB1AL46 878 aaPredicted RBP17.8■□□□□ 0.44
SYNRG-217ENST00000612223 NUTM2AQ8IVF1 878 aaPredicted RBP17.8■□□□□ 0.44
SYNRG-217ENST00000612223 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
SYNRG-217ENST00000612223 FAM184AQ8NB25 1140 aa17.8■□□□□ 0.44
SYNRG-217ENST00000612223 CSPP1Q1MSJ5 1256 aa17.8■□□□□ 0.44
SYNRG-217ENST00000612223 PTPRGP23470 1445 aa17.79■□□□□ 0.44
SYNRG-217ENST00000612223 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
SYNRG-217ENST00000612223 RAPGEF4Q8WZA2 1011 aa17.79■□□□□ 0.44
SYNRG-217ENST00000612223 KIF3AQ9Y496 699 aa17.79■□□□□ 0.44
SYNRG-217ENST00000612223 CCDC18Q5T9S5 1454 aa17.79■□□□□ 0.44
SYNRG-217ENST00000612223 L3MBTL2Q969R5 705 aa17.78■□□□□ 0.44
SYNRG-217ENST00000612223 FYB1O15117 783 aa17.78■□□□□ 0.44
SYNRG-217ENST00000612223 BCL2L13Q9BXK5 485 aa17.78■□□□□ 0.44
SYNRG-217ENST00000612223 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
SYNRG-217ENST00000612223 PANK3Q9H999 370 aa17.77■□□□□ 0.44
SYNRG-217ENST00000612223 SMARCA2P51531 1590 aa17.77■□□□□ 0.43
SYNRG-217ENST00000612223 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
SYNRG-217ENST00000612223 TPM3P06753 285 aa17.76■□□□□ 0.43
SYNRG-217ENST00000612223 CCDC43Q96MW1 224 aaKnown RBP17.76■□□□□ 0.43
SYNRG-217ENST00000612223 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
SYNRG-217ENST00000612223 CGNL1Q0VF96 1302 aa17.76■□□□□ 0.43
SYNRG-217ENST00000612223 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
SYNRG-217ENST00000612223 PTMSP20962 102 aa17.76■□□□□ 0.43
SYNRG-217ENST00000612223 RAB3GAP2Q9H2M9 1393 aa17.76■□□□□ 0.43
SYNRG-217ENST00000612223 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.76■□□□□ 0.43
SYNRG-217ENST00000612223 LRRFIP1Q32MZ4 808 aaKnown RBP17.75■□□□□ 0.43
SYNRG-217ENST00000612223 MCTP1Q6DN14 999 aa17.75■□□□□ 0.43
SYNRG-217ENST00000612223 UACAQ9BZF9 1416 aa17.75■□□□□ 0.43
SYNRG-217ENST00000612223 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
SYNRG-217ENST00000612223 CCDC144AA2RUR9 1427 aa17.75■□□□□ 0.43
SYNRG-217ENST00000612223 PIP4K2BP78356 416 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms