RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 L3MBTL2Q969R5 705 aa14.68□□□□□ -0.06
PCDHGC3-202ENST00000611950 TAOK2Q9UL54 1235 aa14.68□□□□□ -0.06
PCDHGC3-202ENST00000611950 ZNF326Q5BKZ1 582 aaKnown RBP14.68□□□□□ -0.06
PCDHGC3-202ENST00000611950 C11orf95C9JLR9 678 aaPredicted RBP14.67□□□□□ -0.06
PCDHGC3-202ENST00000611950 HOMEZQ8IX15 550 aa14.67□□□□□ -0.06
PCDHGC3-202ENST00000611950 RBM19Q9Y4C8 960 aaKnown RBP14.67□□□□□ -0.06
PCDHGC3-202ENST00000611950 TROQ12816 1431 aaPredicted RBP14.67□□□□□ -0.06
PCDHGC3-202ENST00000611950 ADAMTSL3P82987 1691 aa14.67□□□□□ -0.06
PCDHGC3-202ENST00000611950 FBXO41Q8TF61 875 aa14.66□□□□□ -0.06
PCDHGC3-202ENST00000611950 CDK11AQ9UQ88 783 aaPredicted RBP14.66□□□□□ -0.06
PCDHGC3-202ENST00000611950 ANKRD30BQ9BXX2 1392 aa14.65□□□□□ -0.06
PCDHGC3-202ENST00000611950 KIF14Q15058 1648 aa14.65□□□□□ -0.06
PCDHGC3-202ENST00000611950 EIF4G2P78344 907 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCDHGC3-202ENST00000611950 NEO1Q92859 1461 aa14.65□□□□□ -0.06
PCDHGC3-202ENST00000611950 ZMYND15Q9H091 742 aa14.64□□□□□ -0.07
PCDHGC3-202ENST00000611950 CAMSAP2Q08AD1 1489 aa14.64□□□□□ -0.07
PCDHGC3-202ENST00000611950 MADDQ8WXG6 1647 aa14.64□□□□□ -0.07
PCDHGC3-202ENST00000611950 BCORL1Q5H9F3 1711 aa14.63□□□□□ -0.07
PCDHGC3-202ENST00000611950 ZNF777Q9ULD5 760 aaPredicted RBP14.63□□□□□ -0.07
PCDHGC3-202ENST00000611950 RPRD2Q5VT52 1461 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-202ENST00000611950 GPATCH8Q9UKJ3 1502 aaKnown RBP14.63□□□□□ -0.07
PCDHGC3-202ENST00000611950 FRMPD1Q5SYB0 1578 aa14.62□□□□□ -0.07
PCDHGC3-202ENST00000611950 CFDP1Q9UEE9 299 aaPredicted RBP14.62□□□□□ -0.07
PCDHGC3-202ENST00000611950 PLEKHD1A6NEE1 506 aa14.61□□□□□ -0.07
PCDHGC3-202ENST00000611950 NBPF8Q3BBV2 869 aa14.61□□□□□ -0.07
PCDHGC3-202ENST00000611950 RIMS1Q86UR5 1692 aaKnown RBP14.6□□□□□ -0.07
PCDHGC3-202ENST00000611950 MRS2Q9HD23 443 aa14.6□□□□□ -0.07
PCDHGC3-202ENST00000611950 ITSN2Q9NZM3 1697 aa14.59□□□□□ -0.07
PCDHGC3-202ENST00000611950 PZPP20742 1482 aa14.59□□□□□ -0.07
PCDHGC3-202ENST00000611950 NCOA1Q15788 1441 aa14.59□□□□□ -0.07
PCDHGC3-202ENST00000611950 RBM10P98175 930 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-202ENST00000611950 TPRNQ4KMQ1 711 aa14.59□□□□□ -0.07
PCDHGC3-202ENST00000611950 ADRA2BP18089 450 aa14.58□□□□□ -0.08
PCDHGC3-202ENST00000611950 ARHGEF40Q8TER5 1519 aa14.57□□□□□ -0.08
PCDHGC3-202ENST00000611950 HSPA2P54652 639 aa14.56□□□□□ -0.08
PCDHGC3-202ENST00000611950 LMTK3Q96Q04 1460 aa14.56□□□□□ -0.08
PCDHGC3-202ENST00000611950 RICTORQ6R327 1708 aa14.56□□□□□ -0.08
PCDHGC3-202ENST00000611950 FANCAO15360 1455 aa14.56□□□□□ -0.08
PCDHGC3-202ENST00000611950 ADGBQ8N7X0 1667 aa14.56□□□□□ -0.08
PCDHGC3-202ENST00000611950 CROCC2H7BZ55 1655 aa14.55□□□□□ -0.08
PCDHGC3-202ENST00000611950 ADGRL2O95490 1459 aa14.55□□□□□ -0.08
PCDHGC3-202ENST00000611950 MLECQ14165 292 aa14.55□□□□□ -0.08
PCDHGC3-202ENST00000611950 CNTLNQ9NXG0 1405 aa14.54□□□□□ -0.08
PCDHGC3-202ENST00000611950 B4GALNT3Q6L9W6 998 aa14.53□□□□□ -0.08
PCDHGC3-202ENST00000611950 PRKRIP1Q9H875 184 aaPredicted RBP14.53□□□□□ -0.08
PCDHGC3-202ENST00000611950 CCDC7Q96M83 1385 aa14.53□□□□□ -0.08
PCDHGC3-202ENST00000611950 GLIPR1L2Q4G1C9 344 aa14.53□□□□□ -0.08
PCDHGC3-202ENST00000611950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.53□□□□□ -0.08
PCDHGC3-202ENST00000611950 CFAP74Q9C0B2 1584 aa14.53□□□□□ -0.08
PCDHGC3-202ENST00000611950 TTC37Q6PGP7 1564 aa14.52□□□□□ -0.09
PCDHGC3-202ENST00000611950 CDC42BPAQ5VT25 1732 aa14.52□□□□□ -0.09
PCDHGC3-202ENST00000611950 SPATA31E1Q6ZUB1 1445 aa14.52□□□□□ -0.09
PCDHGC3-202ENST00000611950 POGZQ7Z3K3 1410 aa14.52□□□□□ -0.09
PCDHGC3-202ENST00000611950 YEATS2Q9ULM3 1422 aa14.51□□□□□ -0.09
PCDHGC3-202ENST00000611950 MSH5O43196 834 aa14.5□□□□□ -0.09
PCDHGC3-202ENST00000611950 ANKRD30AQ9BXX3 1397 aa14.5□□□□□ -0.09
PCDHGC3-202ENST00000611950 CHMP4AQ9BY43 222 aa14.5□□□□□ -0.09
PCDHGC3-202ENST00000611950 KIAA1107Q9UPP5 1409 aa14.5□□□□□ -0.09
PCDHGC3-202ENST00000611950 ZFYVE16Q7Z3T8 1539 aa14.5□□□□□ -0.09
PCDHGC3-202ENST00000611950 KIF7Q2M1P5 1343 aa14.5□□□□□ -0.09
PCDHGC3-202ENST00000611950 ANKRD50Q9ULJ7 1429 aa14.49□□□□□ -0.09
PCDHGC3-202ENST00000611950 RSPH6AQ9H0K4 717 aa14.49□□□□□ -0.09
PCDHGC3-202ENST00000611950 MBD5Q9P267 1494 aa14.49□□□□□ -0.09
PCDHGC3-202ENST00000611950 SIGLEC1Q9BZZ2 1709 aa14.49□□□□□ -0.09
PCDHGC3-202ENST00000611950 PKD2Q13563 968 aa14.48□□□□□ -0.09
PCDHGC3-202ENST00000611950 DHX37Q8IY37 1157 aaKnown RBP14.48□□□□□ -0.09
PCDHGC3-202ENST00000611950 FER1L4A9Z1Z3 1794 aa14.47□□□□□ -0.09
PCDHGC3-202ENST00000611950 C9orf84Q5VXU9 1444 aa14.47□□□□□ -0.09
PCDHGC3-202ENST00000611950 ZMYM4Q5VZL5 1548 aa14.47□□□□□ -0.09
PCDHGC3-202ENST00000611950 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
PCDHGC3-202ENST00000611950 SCAPERQ9BY12 1400 aa14.46□□□□□ -0.09
PCDHGC3-202ENST00000611950 SHANK2Q9UPX8 1470 aa14.45□□□□□ -0.1
PCDHGC3-202ENST00000611950 ZBTB22O15209 634 aa14.45□□□□□ -0.1
PCDHGC3-202ENST00000611950 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
PCDHGC3-202ENST00000611950 IL27Q8NEV9 243 aa14.45□□□□□ -0.1
PCDHGC3-202ENST00000611950 MAGI2Q86UL8 1455 aa14.43□□□□□ -0.1
PCDHGC3-202ENST00000611950 POLR1AO95602 1720 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-202ENST00000611950 NUP155O75694 1391 aa14.43□□□□□ -0.1
PCDHGC3-202ENST00000611950 PLCH2O75038 1416 aa14.42□□□□□ -0.1
PCDHGC3-202ENST00000611950 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
PCDHGC3-202ENST00000611950 CERKQ8TCT0 537 aa14.42□□□□□ -0.1
PCDHGC3-202ENST00000611950 CEBPAP49715 358 aaPredicted RBP14.41□□□□□ -0.1
PCDHGC3-202ENST00000611950 EFCAB2Q5VUJ9 269 aa14.41□□□□□ -0.1
PCDHGC3-202ENST00000611950 NPM2Q86SE8 214 aaKnown RBP14.41□□□□□ -0.1
PCDHGC3-202ENST00000611950 MYO5CQ9NQX4 1742 aa14.4□□□□□ -0.1
PCDHGC3-202ENST00000611950 BRD2P25440 801 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-202ENST00000611950 USP47Q96K76 1375 aa14.4□□□□□ -0.1
PCDHGC3-202ENST00000611950 KIF15Q9NS87 1388 aa14.4□□□□□ -0.1
PCDHGC3-202ENST00000611950 TSPY4P0CV99 314 aa14.39□□□□□ -0.11
PCDHGC3-202ENST00000611950 TSPY10P0CW01 314 aa14.39□□□□□ -0.11
PCDHGC3-202ENST00000611950 ATP10AO60312 1499 aa14.39□□□□□ -0.11
PCDHGC3-202ENST00000611950 KDM5DQ9BY66 1539 aa14.39□□□□□ -0.11
PCDHGC3-202ENST00000611950 ARHGEF5Q12774 1597 aa14.38□□□□□ -0.11
PCDHGC3-202ENST00000611950 SAMD9LQ8IVG5 1584 aa14.38□□□□□ -0.11
PCDHGC3-202ENST00000611950 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
PCDHGC3-202ENST00000611950 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
PCDHGC3-202ENST00000611950 KDM5CP41229 1560 aa14.37□□□□□ -0.11
PCDHGC3-202ENST00000611950 CDC42BPBQ9Y5S2 1711 aa14.37□□□□□ -0.11
PCDHGC3-202ENST00000611950 PREX1Q8TCU6 1659 aa14.37□□□□□ -0.11
PCDHGC3-202ENST00000611950 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms