RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 MAST1Q9Y2H9 1570 aa19.06■□□□□ 0.64
FAM228B-207ENST00000611917 PTPRKQ15262 1439 aa19.04■□□□□ 0.64
FAM228B-207ENST00000611917 C3P01024 1663 aa19.03■□□□□ 0.64
FAM228B-207ENST00000611917 DUOX2Q9NRD8 1548 aa19.03■□□□□ 0.64
FAM228B-207ENST00000611917 KANK1Q14678 1352 aa19.03■□□□□ 0.64
FAM228B-207ENST00000611917 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
FAM228B-207ENST00000611917 PKD2Q13563 968 aa19.01■□□□□ 0.63
FAM228B-207ENST00000611917 THEMISQ8N1K5 641 aaPredicted RBP19.01■□□□□ 0.63
FAM228B-207ENST00000611917 MROH2AA6NES4 1674 aa19.01■□□□□ 0.63
FAM228B-207ENST00000611917 PREX1Q8TCU6 1659 aa19.01■□□□□ 0.63
FAM228B-207ENST00000611917 NCOA1Q15788 1441 aa19■□□□□ 0.63
FAM228B-207ENST00000611917 ITGAEP38570 1179 aa19■□□□□ 0.63
FAM228B-207ENST00000611917 TNRQ92752 1358 aa19■□□□□ 0.63
FAM228B-207ENST00000611917 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
FAM228B-207ENST00000611917 CLTCQ00610 1675 aaKnown RBP18.99■□□□□ 0.63
FAM228B-207ENST00000611917 ILDR1Q86SU0 546 aaPredicted RBP18.98■□□□□ 0.63
FAM228B-207ENST00000611917 ERBINQ96RT1 1412 aa18.98■□□□□ 0.63
FAM228B-207ENST00000611917 KDM5DQ9BY66 1539 aa18.97■□□□□ 0.63
FAM228B-207ENST00000611917 NCKAP5LQ9HCH0 1330 aa18.97■□□□□ 0.63
FAM228B-207ENST00000611917 DNMT1P26358 1616 aaKnown RBP18.95■□□□□ 0.62
FAM228B-207ENST00000611917 PZPP20742 1482 aa18.95■□□□□ 0.62
FAM228B-207ENST00000611917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
FAM228B-207ENST00000611917 ANKLE2Q86XL3 938 aa18.94■□□□□ 0.62
FAM228B-207ENST00000611917 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
FAM228B-207ENST00000611917 FBXO41Q8TF61 875 aa18.94■□□□□ 0.62
FAM228B-207ENST00000611917 PTPRTO14522 1441 aa18.93■□□□□ 0.62
FAM228B-207ENST00000611917 EIF2AK4Q9P2K8 1649 aaKnown RBP18.91■□□□□ 0.62
FAM228B-207ENST00000611917 ANKRD50Q9ULJ7 1429 aa18.91■□□□□ 0.62
FAM228B-207ENST00000611917 A2ML1A8K2U0 1454 aa18.9■□□□□ 0.62
FAM228B-207ENST00000611917 STAG3Q9UJ98 1225 aa18.9■□□□□ 0.62
FAM228B-207ENST00000611917 ADGRL2O95490 1459 aa18.9■□□□□ 0.62
FAM228B-207ENST00000611917 ROCK1Q13464 1354 aa18.89■□□□□ 0.61
FAM228B-207ENST00000611917 ABCC3O15438 1527 aa18.88■□□□□ 0.61
FAM228B-207ENST00000611917 ARHGAP31Q2M1Z3 1444 aa18.87■□□□□ 0.61
FAM228B-207ENST00000611917 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
FAM228B-207ENST00000611917 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
FAM228B-207ENST00000611917 NLRP1Q9C000 1473 aa18.87■□□□□ 0.61
FAM228B-207ENST00000611917 PLA2R1Q13018 1463 aa18.84■□□□□ 0.61
FAM228B-207ENST00000611917 SLC52A1Q9NWF4 448 aa18.84■□□□□ 0.61
FAM228B-207ENST00000611917 CROCC2H7BZ55 1655 aa18.84■□□□□ 0.61
FAM228B-207ENST00000611917 EID1Q9Y6B2 187 aa18.83■□□□□ 0.6
FAM228B-207ENST00000611917 CEP170BQ9Y4F5 1589 aaPredicted RBP18.83■□□□□ 0.6
FAM228B-207ENST00000611917 STRCQ7RTU9 1775 aa18.81■□□□□ 0.6
FAM228B-207ENST00000611917 IDI1Q13907 227 aa18.81■□□□□ 0.6
FAM228B-207ENST00000611917 TXNDC2Q86VQ3 553 aa18.81■□□□□ 0.6
FAM228B-207ENST00000611917 ZC3H13Q5T200 1668 aaKnown RBP18.8■□□□□ 0.6
FAM228B-207ENST00000611917 ERVK-7P63135 1459 aa18.8■□□□□ 0.6
FAM228B-207ENST00000611917 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
FAM228B-207ENST00000611917 UGGT1Q9NYU2 1555 aa18.79■□□□□ 0.6
FAM228B-207ENST00000611917 NUP155O75694 1391 aa18.79■□□□□ 0.6
FAM228B-207ENST00000611917 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
FAM228B-207ENST00000611917 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
FAM228B-207ENST00000611917 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
FAM228B-207ENST00000611917 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
FAM228B-207ENST00000611917 SPATA31D1Q6ZQQ2 1576 aa18.76■□□□□ 0.59
FAM228B-207ENST00000611917 LMTK2Q8IWU2 1503 aa18.76■□□□□ 0.59
FAM228B-207ENST00000611917 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
FAM228B-207ENST00000611917 ZNF142P52746 1687 aaPredicted RBP18.74■□□□□ 0.59
FAM228B-207ENST00000611917 DEPDC5O75140 1603 aa18.72■□□□□ 0.59
FAM228B-207ENST00000611917 TRIM52Q96A61 297 aa18.72■□□□□ 0.59
FAM228B-207ENST00000611917 CFAP65Q6ZU64 1925 aaKnown RBP18.71■□□□□ 0.59
FAM228B-207ENST00000611917 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
FAM228B-207ENST00000611917 LTKP29376 864 aa18.71■□□□□ 0.59
FAM228B-207ENST00000611917 VWDEQ8N2E2 1590 aa18.71■□□□□ 0.59
FAM228B-207ENST00000611917 CEP152O94986 1710 aa18.71■□□□□ 0.59
FAM228B-207ENST00000611917 NPHP4O75161 1426 aaPredicted RBP18.7■□□□□ 0.58
FAM228B-207ENST00000611917 BCANQ96GW7 911 aa18.7■□□□□ 0.58
FAM228B-207ENST00000611917 RPRD2Q5VT52 1461 aaKnown RBP18.7■□□□□ 0.58
FAM228B-207ENST00000611917 NOS1P29475 1434 aa18.69■□□□□ 0.58
FAM228B-207ENST00000611917 TMEM2Q9UHN6 1383 aa18.68■□□□□ 0.58
FAM228B-207ENST00000611917 MED14O60244 1454 aa18.67■□□□□ 0.58
FAM228B-207ENST00000611917 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.67■□□□□ 0.58
FAM228B-207ENST00000611917 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
FAM228B-207ENST00000611917 UBAP1LF5GYI3 381 aa18.65■□□□□ 0.58
FAM228B-207ENST00000611917 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
FAM228B-207ENST00000611917 EFCAB6Q5THR3 1501 aa18.64■□□□□ 0.57
FAM228B-207ENST00000611917 TOM1O60784 492 aa18.63■□□□□ 0.57
FAM228B-207ENST00000611917 NAIPQ13075 1403 aa18.63■□□□□ 0.57
FAM228B-207ENST00000611917 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
FAM228B-207ENST00000611917 IQSEC2Q5JU85 1478 aa18.62■□□□□ 0.57
FAM228B-207ENST00000611917 SCAF11Q99590 1463 aaKnown RBP18.62■□□□□ 0.57
FAM228B-207ENST00000611917 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
FAM228B-207ENST00000611917 ARHGAP23Q9P227 1491 aa18.6■□□□□ 0.57
FAM228B-207ENST00000611917 SLIT1O75093 1534 aa18.59■□□□□ 0.57
FAM228B-207ENST00000611917 SLC26A8Q96RN1 970 aa18.59■□□□□ 0.57
FAM228B-207ENST00000611917 UNC13BO14795 1591 aa18.59■□□□□ 0.57
FAM228B-207ENST00000611917 HFM1A2PYH4 1435 aa18.58■□□□□ 0.57
FAM228B-207ENST00000611917 TET3O43151 1660 aa18.58■□□□□ 0.57
FAM228B-207ENST00000611917 KCNA6P17658 529 aa18.57■□□□□ 0.56
FAM228B-207ENST00000611917 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
FAM228B-207ENST00000611917 UBR1Q8IWV7 1749 aa18.57■□□□□ 0.56
FAM228B-207ENST00000611917 NEURL4Q96JN8 1562 aa18.55■□□□□ 0.56
FAM228B-207ENST00000611917 CPS1P31327 1500 aa18.55■□□□□ 0.56
FAM228B-207ENST00000611917 TBX22Q9Y458 520 aa18.55■□□□□ 0.56
FAM228B-207ENST00000611917 PIK3C2BO00750 1634 aa18.55■□□□□ 0.56
FAM228B-207ENST00000611917 PROSER2Q86WR7 435 aaPredicted RBP18.54■□□□□ 0.56
FAM228B-207ENST00000611917 SYNMO15061 1565 aa18.54■□□□□ 0.56
FAM228B-207ENST00000611917 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
FAM228B-207ENST00000611917 IQGAP3Q86VI3 1631 aa18.53■□□□□ 0.56
FAM228B-207ENST00000611917 RIMS2Q9UQ26 1411 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms