RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 PZPP20742 1482 aa19.21■□□□□ 0.67
FDPS-220ENST00000611010 FAM135AQ9P2D6 1515 aa19.2■□□□□ 0.66
FDPS-220ENST00000611010 PKD2Q13563 968 aa19.2■□□□□ 0.66
FDPS-220ENST00000611010 CCDC141Q6ZP82 1450 aa19.2■□□□□ 0.66
FDPS-220ENST00000611010 VWDEQ8N2E2 1590 aa19.19■□□□□ 0.66
FDPS-220ENST00000611010 DHX29Q7Z478 1369 aaKnown RBP19.19■□□□□ 0.66
FDPS-220ENST00000611010 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
FDPS-220ENST00000611010 STRCP1A6NGW2 1772 aa19.18■□□□□ 0.66
FDPS-220ENST00000611010 ARHGEF5Q12774 1597 aa19.17■□□□□ 0.66
FDPS-220ENST00000611010 RNF17Q9BXT8 1623 aaKnown RBP19.17■□□□□ 0.66
FDPS-220ENST00000611010 MED1Q15648 1581 aaPredicted RBP19.16■□□□□ 0.66
FDPS-220ENST00000611010 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
FDPS-220ENST00000611010 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
FDPS-220ENST00000611010 TNRQ92752 1358 aa19.15■□□□□ 0.66
FDPS-220ENST00000611010 CPS1P31327 1500 aa19.15■□□□□ 0.66
FDPS-220ENST00000611010 DEPDC5O75140 1603 aa19.14■□□□□ 0.66
FDPS-220ENST00000611010 MROH1Q8NDA8 1641 aa19.14■□□□□ 0.66
FDPS-220ENST00000611010 FBXO31Q5XUX0 539 aaPredicted RBP19.14■□□□□ 0.65
FDPS-220ENST00000611010 IQGAP1P46940 1657 aa19.13■□□□□ 0.65
FDPS-220ENST00000611010 ZC3H13Q5T200 1668 aaKnown RBP19.13■□□□□ 0.65
FDPS-220ENST00000611010 SHANK2Q9UPX8 1470 aa19.12■□□□□ 0.65
FDPS-220ENST00000611010 CEP152O94986 1710 aa19.11■□□□□ 0.65
FDPS-220ENST00000611010 UGGT1Q9NYU2 1555 aa19.1■□□□□ 0.65
FDPS-220ENST00000611010 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
FDPS-220ENST00000611010 ABCC3O15438 1527 aa19.1■□□□□ 0.65
FDPS-220ENST00000611010 MED14O60244 1454 aa19.09■□□□□ 0.65
FDPS-220ENST00000611010 KIF3BO15066 747 aa19.09■□□□□ 0.65
FDPS-220ENST00000611010 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
FDPS-220ENST00000611010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.08■□□□□ 0.653e-6■□□□□ 10.4
FDPS-220ENST00000611010 EIF2AK4Q9P2K8 1649 aaKnown RBP19.08■□□□□ 0.65
FDPS-220ENST00000611010 UBR1Q8IWV7 1749 aa19.06■□□□□ 0.64
FDPS-220ENST00000611010 MIA2Q96PC5 1412 aa19.06■□□□□ 0.64
FDPS-220ENST00000611010 HSPA1LP34931 641 aa19.05■□□□□ 0.64
FDPS-220ENST00000611010 SYNMO15061 1565 aa19.05■□□□□ 0.64
FDPS-220ENST00000611010 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
FDPS-220ENST00000611010 XIRP1Q702N8 1843 aaKnown RBP19.04■□□□□ 0.64
FDPS-220ENST00000611010 CFAP65Q6ZU64 1925 aaKnown RBP19.03■□□□□ 0.64
FDPS-220ENST00000611010 ERVK-7P63135 1459 aa19.03■□□□□ 0.64
FDPS-220ENST00000611010 CROCC2H7BZ55 1655 aa19.01■□□□□ 0.63
FDPS-220ENST00000611010 LRRC9Q6ZRR7 1453 aa19.01■□□□□ 0.63
FDPS-220ENST00000611010 WASHC2CQ9Y4E1 1318 aa19■□□□□ 0.63
FDPS-220ENST00000611010 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
FDPS-220ENST00000611010 PIP4K2BP78356 416 aa18.99■□□□□ 0.63
FDPS-220ENST00000611010 PRDM15P57071 1507 aaPredicted RBP18.97■□□□□ 0.63
FDPS-220ENST00000611010 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
FDPS-220ENST00000611010 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
FDPS-220ENST00000611010 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
FDPS-220ENST00000611010 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
FDPS-220ENST00000611010 ARHGAP23Q9P227 1491 aa18.93■□□□□ 0.62
FDPS-220ENST00000611010 TOM1O60784 492 aa18.93■□□□□ 0.62
FDPS-220ENST00000611010 THEMISQ8N1K5 641 aaPredicted RBP18.93■□□□□ 0.62
FDPS-220ENST00000611010 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
FDPS-220ENST00000611010 SLIT1O75093 1534 aa18.92■□□□□ 0.62
FDPS-220ENST00000611010 DUOX2Q9NRD8 1548 aa18.91■□□□□ 0.62
FDPS-220ENST00000611010 MYOM3Q5VTT5 1437 aa18.91■□□□□ 0.62
FDPS-220ENST00000611010 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
FDPS-220ENST00000611010 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
FDPS-220ENST00000611010 KANK4Q5T7N3 995 aaPredicted RBP18.88■□□□□ 0.61
FDPS-220ENST00000611010 TSPY4P0CV99 314 aa18.87■□□□□ 0.61
FDPS-220ENST00000611010 TSPY10P0CW01 314 aa18.87■□□□□ 0.61
FDPS-220ENST00000611010 KDM5AP29375 1690 aaKnown RBP18.85■□□□□ 0.61
FDPS-220ENST00000611010 PTPN23Q9H3S7 1636 aa18.85■□□□□ 0.61
FDPS-220ENST00000611010 ARHGAP31Q2M1Z3 1444 aa18.85■□□□□ 0.61
FDPS-220ENST00000611010 LTKP29376 864 aa18.83■□□□□ 0.6
FDPS-220ENST00000611010 ABCC5O15440 1437 aa18.83■□□□□ 0.6
FDPS-220ENST00000611010 ERBINQ96RT1 1412 aa18.83■□□□□ 0.6
FDPS-220ENST00000611010 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
FDPS-220ENST00000611010 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
FDPS-220ENST00000611010 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
FDPS-220ENST00000611010 DAPK1P53355 1430 aa18.78■□□□□ 0.6
FDPS-220ENST00000611010 MYO5BQ9ULV0 1848 aa18.78■□□□□ 0.6
FDPS-220ENST00000611010 TET3O43151 1660 aa18.78■□□□□ 0.6
FDPS-220ENST00000611010 NWD1Q149M9 1564 aa18.77■□□□□ 0.6
FDPS-220ENST00000611010 ROBO1Q9Y6N7 1651 aa18.77■□□□□ 0.6
FDPS-220ENST00000611010 EFCAB6Q5THR3 1501 aa18.77■□□□□ 0.6
FDPS-220ENST00000611010 ADGRB3O60242 1522 aa18.75■□□□□ 0.59
FDPS-220ENST00000611010 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
FDPS-220ENST00000611010 RGS17Q9UGC6 210 aaPredicted RBP18.75■□□□□ 0.59
FDPS-220ENST00000611010 TMEM2Q9UHN6 1383 aa18.75■□□□□ 0.59
FDPS-220ENST00000611010 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
FDPS-220ENST00000611010 TXNDC2Q86VQ3 553 aa18.72■□□□□ 0.59
FDPS-220ENST00000611010 FGD6Q6ZV73 1430 aa18.72■□□□□ 0.59
FDPS-220ENST00000611010 GCC2Q8IWJ2 1684 aa18.71■□□□□ 0.59
FDPS-220ENST00000611010 NOS1P29475 1434 aa18.71■□□□□ 0.59
FDPS-220ENST00000611010 SETD1AO15047 1707 aaKnown RBP18.7■□□□□ 0.58
FDPS-220ENST00000611010 RRP7BPQ9NSQ0 103 aa18.7■□□□□ 0.58
FDPS-220ENST00000611010 FAM135BQ49AJ0 1406 aa18.69■□□□□ 0.58
FDPS-220ENST00000611010 TMEM94Q12767 1356 aa18.68■□□□□ 0.58
FDPS-220ENST00000611010 CHD2O14647 1828 aaKnown RBP18.67■□□□□ 0.58
FDPS-220ENST00000611010 NKTRP30414 1462 aaKnown RBP18.67■□□□□ 0.58
FDPS-220ENST00000611010 ADGRL2O95490 1459 aa18.66■□□□□ 0.58
FDPS-220ENST00000611010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.581e-9■□□□□ 9.8
FDPS-220ENST00000611010 IDI1Q13907 227 aa18.65■□□□□ 0.58
FDPS-220ENST00000611010 PHLPP1O60346 1717 aa18.65■□□□□ 0.58
FDPS-220ENST00000611010 ZFYVE9O95405 1425 aa18.64■□□□□ 0.57
FDPS-220ENST00000611010 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
FDPS-220ENST00000611010 RBM33Q96EV2 1170 aaKnown RBP18.63■□□□□ 0.57
FDPS-220ENST00000611010 EID1Q9Y6B2 187 aa18.63■□□□□ 0.57
FDPS-220ENST00000611010 KANK1Q14678 1352 aa18.62■□□□□ 0.57
FDPS-220ENST00000611010 COL16A1Q07092 1604 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms