RNA–Protein interactions for RNA: ENST00000610874.4

TNIP1-221, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-221ENST00000610874 PRKRIP1Q9H875 184 aaPredicted RBP24.31■■□□□ 1.48
TNIP1-221ENST00000610874 MRS2Q9HD23 443 aa24.3■■□□□ 1.48
TNIP1-221ENST00000610874 FANCAO15360 1455 aa24.3■■□□□ 1.48
TNIP1-221ENST00000610874 CCDC7Q96M83 1385 aa24.29■■□□□ 1.48
TNIP1-221ENST00000610874 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
TNIP1-221ENST00000610874 RGL3Q3MIN7 710 aa24.28■■□□□ 1.48
TNIP1-221ENST00000610874 KDM5DQ9BY66 1539 aa24.28■■□□□ 1.48
TNIP1-221ENST00000610874 FANCIQ9NVI1 1328 aa24.27■■□□□ 1.48
TNIP1-221ENST00000610874 DCAF11Q8TEB1 546 aa24.27■■□□□ 1.48
TNIP1-221ENST00000610874 PPP4R2Q9NY27 417 aa24.27■■□□□ 1.48
TNIP1-221ENST00000610874 ERICH6Q7L0X2 663 aa24.24■■□□□ 1.47
TNIP1-221ENST00000610874 PLXNC1O60486 1568 aa24.24■■□□□ 1.47
TNIP1-221ENST00000610874 SCAPERQ9BY12 1400 aa24.23■■□□□ 1.47
TNIP1-221ENST00000610874 ERICH6BQ5W0A0 696 aa24.23■■□□□ 1.47
TNIP1-221ENST00000610874 DUOX2Q9NRD8 1548 aa24.23■■□□□ 1.47
TNIP1-221ENST00000610874 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
TNIP1-221ENST00000610874 ADGRL1O94910 1474 aa24.21■■□□□ 1.47
TNIP1-221ENST00000610874 B4GALNT3Q6L9W6 998 aa24.21■■□□□ 1.47
TNIP1-221ENST00000610874 ABCA9Q8IUA7 1624 aa24.2■■□□□ 1.46
TNIP1-221ENST00000610874 POLR3GLQ9BT43 218 aa24.2■■□□□ 1.46
TNIP1-221ENST00000610874 ZBED9Q6R2W3 1325 aa24.19■■□□□ 1.46
TNIP1-221ENST00000610874 CCDC144AA2RUR9 1427 aa24.18■■□□□ 1.46
TNIP1-221ENST00000610874 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
TNIP1-221ENST00000610874 KIF7Q2M1P5 1343 aa24.18■■□□□ 1.46
TNIP1-221ENST00000610874 PLA2R1Q13018 1463 aa24.17■■□□□ 1.46
TNIP1-221ENST00000610874 ERBINQ96RT1 1412 aa24.17■■□□□ 1.46
TNIP1-221ENST00000610874 UNC13BO14795 1591 aa24.17■■□□□ 1.46
TNIP1-221ENST00000610874 ZFYVE16Q7Z3T8 1539 aa24.15■■□□□ 1.46
TNIP1-221ENST00000610874 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
TNIP1-221ENST00000610874 KIF3BO15066 747 aa24.15■■□□□ 1.46
TNIP1-221ENST00000610874 SPATA31E1Q6ZUB1 1445 aa24.14■■□□□ 1.45
TNIP1-221ENST00000610874 CARD11Q9BXL7 1154 aa24.14■■□□□ 1.45
TNIP1-221ENST00000610874 USP47Q96K76 1375 aa24.13■■□□□ 1.45
TNIP1-221ENST00000610874 CD109Q6YHK3 1445 aa24.12■■□□□ 1.45
TNIP1-221ENST00000610874 RTEL1-TNFRSF6BF6WH68 1400 aa24.1■■□□□ 1.45
TNIP1-221ENST00000610874 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
TNIP1-221ENST00000610874 ATP7AQ04656 1500 aa24.09■■□□□ 1.45
TNIP1-221ENST00000610874 MAGI2Q86UL8 1455 aa24.05■■□□□ 1.44
TNIP1-221ENST00000610874 NBPF1Q3BBV0 1214 aa24.05■■□□□ 1.44
TNIP1-221ENST00000610874 RAPGEF3O95398 923 aa24.04■■□□□ 1.44
TNIP1-221ENST00000610874 UHRF1BP1Q6BDS2 1440 aa24.04■■□□□ 1.44
TNIP1-221ENST00000610874 POLR1AO95602 1720 aaPredicted RBP24.04■■□□□ 1.44
TNIP1-221ENST00000610874 ST20-MTHFSA0A0A6YYL1 179 aa24.03■■□□□ 1.44
TNIP1-221ENST00000610874 INO80Q9ULG1 1556 aaPredicted RBP24.02■■□□□ 1.44
TNIP1-221ENST00000610874 ROCK2O75116 1388 aaKnown RBP24.02■■□□□ 1.44
TNIP1-221ENST00000610874 SENP3-EIF4A1A0A087X0R7 540 aa24.01■■□□□ 1.43
TNIP1-221ENST00000610874 RALGAPBQ86X10 1494 aa24.01■■□□□ 1.43
TNIP1-221ENST00000610874 DHX29Q7Z478 1369 aaKnown RBP24■■□□□ 1.43
TNIP1-221ENST00000610874 A2MP01023 1474 aa23.99■■□□□ 1.43
TNIP1-221ENST00000610874 BCORL1Q5H9F3 1711 aa23.99■■□□□ 1.43
TNIP1-221ENST00000610874 KDM5CP41229 1560 aa23.97■■□□□ 1.43
TNIP1-221ENST00000610874 ZNF518AQ6AHZ1 1483 aa23.97■■□□□ 1.43
TNIP1-221ENST00000610874 GGT6Q6P531 493 aa23.97■■□□□ 1.43
TNIP1-221ENST00000610874 PRAG1Q86YV5 1406 aa23.96■■□□□ 1.43
TNIP1-221ENST00000610874 E9PCH4 1651 aa23.96■■□□□ 1.43
TNIP1-221ENST00000610874 KIDINS220Q9ULH0 1771 aa23.95■■□□□ 1.42
TNIP1-221ENST00000610874 KANK1Q14678 1352 aa23.95■■□□□ 1.42
TNIP1-221ENST00000610874 SMG6Q86US8 1419 aaKnown RBP23.94■■□□□ 1.42
TNIP1-221ENST00000610874 ATP10AO60312 1499 aa23.93■■□□□ 1.42
TNIP1-221ENST00000610874 NUDCQ9Y266 331 aa23.93■■□□□ 1.42
TNIP1-221ENST00000610874 POGZQ7Z3K3 1410 aa23.92■■□□□ 1.42
TNIP1-221ENST00000610874 CCDC136Q96JN2 1154 aa23.89■■□□□ 1.41
TNIP1-221ENST00000610874 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
TNIP1-221ENST00000610874 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
TNIP1-221ENST00000610874 DEPDC5O75140 1603 aa23.88■■□□□ 1.41
TNIP1-221ENST00000610874 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
TNIP1-221ENST00000610874 FAM69CQ0P6D2 419 aa23.88■■□□□ 1.41
TNIP1-221ENST00000610874 UGGT1Q9NYU2 1555 aa23.86■■□□□ 1.41
TNIP1-221ENST00000610874 MROH1Q8NDA8 1641 aa23.85■■□□□ 1.41
TNIP1-221ENST00000610874 NOP58Q9Y2X3 529 aaKnown RBP23.85■■□□□ 1.41
TNIP1-221ENST00000610874 TRPM1Q7Z4N2 1603 aa23.85■■□□□ 1.41
TNIP1-221ENST00000610874 TMC1Q8TDI8 760 aa23.84■■□□□ 1.41
TNIP1-221ENST00000610874 TET3O43151 1660 aa23.82■■□□□ 1.4
TNIP1-221ENST00000610874 CLTCL1P53675 1640 aa23.82■■□□□ 1.4
TNIP1-221ENST00000610874 CFAP65Q6ZU64 1925 aaKnown RBP23.82■■□□□ 1.4
TNIP1-221ENST00000610874 PTPRTO14522 1441 aa23.82■■□□□ 1.4
TNIP1-221ENST00000610874 CHGAP10645 457 aaKnown RBP23.82■■□□□ 1.4
TNIP1-221ENST00000610874 TRPM2O94759 1503 aa23.82■■□□□ 1.4
TNIP1-221ENST00000610874 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
TNIP1-221ENST00000610874 VWDEQ8N2E2 1590 aa23.81■■□□□ 1.4
TNIP1-221ENST00000610874 PNISRQ8TF01 805 aaKnown RBP23.81■■□□□ 1.4
TNIP1-221ENST00000610874 PRDM15P57071 1507 aaPredicted RBP23.81■■□□□ 1.4
TNIP1-221ENST00000610874 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
TNIP1-221ENST00000610874 PAK3O75914 559 aaPredicted RBP23.8■■□□□ 1.4
TNIP1-221ENST00000610874 CFAP74Q9C0B2 1584 aa23.8■■□□□ 1.4
TNIP1-221ENST00000610874 MLH3Q9UHC1 1453 aa23.8■■□□□ 1.4
TNIP1-221ENST00000610874 NBR1Q14596 966 aa23.79■■□□□ 1.4
TNIP1-221ENST00000610874 WASHC2CQ9Y4E1 1318 aa23.79■■□□□ 1.4
TNIP1-221ENST00000610874 FRMPD1Q5SYB0 1578 aa23.79■■□□□ 1.4
TNIP1-221ENST00000610874 HECW2Q9P2P5 1572 aa23.78■■□□□ 1.4
TNIP1-221ENST00000610874 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
TNIP1-221ENST00000610874 ABCA6Q8N139 1617 aa23.77■■□□□ 1.4
TNIP1-221ENST00000610874 NEO1Q92859 1461 aa23.77■■□□□ 1.4
TNIP1-221ENST00000610874 ARID4BQ4LE39 1312 aaPredicted RBP23.77■■□□□ 1.4
TNIP1-221ENST00000610874 DEKP35659 375 aaKnown RBP23.77■■□□□ 1.4
TNIP1-221ENST00000610874 CEP152O94986 1710 aa23.76■■□□□ 1.39
TNIP1-221ENST00000610874 GPRASP1Q5JY77 1395 aa23.74■■□□□ 1.39
TNIP1-221ENST00000610874 PPRC1Q5VV67 1664 aaKnown RBP23.74■■□□□ 1.39
TNIP1-221ENST00000610874 YEATS2Q9ULM3 1422 aa23.74■■□□□ 1.39
TNIP1-221ENST00000610874 TESK2Q96S53 571 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms