RNA–Protein interactions for RNA: ENST00000610546.4

PAN2-221, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PAN2, Length 5,301 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-221ENST00000610546 CARMIL1Q5VZK9 1371 aa11.99□□□□□ -0.49
PAN2-221ENST00000610546 AXDND1Q5T1B0 1012 aaPredicted RBP11.99□□□□□ -0.49
PAN2-221ENST00000610546 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
PAN2-221ENST00000610546 DYDC1Q8WWB3 177 aa11.99□□□□□ -0.49
PAN2-221ENST00000610546 CCDC9Q9Y3X0 531 aaKnown RBP11.99□□□□□ -0.49
PAN2-221ENST00000610546 FGD1P98174 961 aa11.99□□□□□ -0.49
PAN2-221ENST00000610546 UQCRHLA0A096LP55 91 aa11.98□□□□□ -0.49
PAN2-221ENST00000610546 UQCRHP07919 91 aa11.98□□□□□ -0.49
PAN2-221ENST00000610546 CGNQ9P2M7 1197 aaKnown RBP11.98□□□□□ -0.49
PAN2-221ENST00000610546 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
PAN2-221ENST00000610546 BRD2P25440 801 aaKnown RBP11.97□□□□□ -0.49
PAN2-221ENST00000610546 MNS1Q8NEH6 495 aa11.97□□□□□ -0.49
PAN2-221ENST00000610546 ERCC4Q92889 916 aaPredicted RBP11.97□□□□□ -0.49
PAN2-221ENST00000610546 NASPP49321 788 aaPredicted RBP11.97□□□□□ -0.49
PAN2-221ENST00000610546 CLGNO14967 610 aa11.96□□□□□ -0.49
PAN2-221ENST00000610546 GPATCH11Q8N954 259 aa11.96□□□□□ -0.49
PAN2-221ENST00000610546 ZNF526Q8TF50 670 aaPredicted RBP11.96□□□□□ -0.49
PAN2-221ENST00000610546 TDRD9Q8NDG6 1382 aaKnown RBP11.96□□□□□ -0.49
PAN2-221ENST00000610546 RCAN3Q9UKA8 241 aa11.96□□□□□ -0.49
PAN2-221ENST00000610546 EFCAB2Q5VUJ9 269 aa11.96□□□□□ -0.5
PAN2-221ENST00000610546 FOXD1Q16676 465 aa11.96□□□□□ -0.5
PAN2-221ENST00000610546 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.5
PAN2-221ENST00000610546 ZHX1Q9UKY1 873 aaPredicted RBP11.95□□□□□ -0.5
PAN2-221ENST00000610546 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
PAN2-221ENST00000610546 KCNJ4P48050 445 aa11.95□□□□□ -0.5
PAN2-221ENST00000610546 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
PAN2-221ENST00000610546 LAMC3Q9Y6N6 1575 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 ESPNB1AK53 854 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 JPH4Q96JJ6 628 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 NUDCQ9Y266 331 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 KANK1Q14678 1352 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 PES1O00541 588 aaKnown RBP11.94□□□□□ -0.5
PAN2-221ENST00000610546 MFAP1P55081 439 aaKnown RBP11.94□□□□□ -0.5
PAN2-221ENST00000610546 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 RUFY1Q96T51 708 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 INCENPQ9NQS7 918 aa11.94□□□□□ -0.5
PAN2-221ENST00000610546 GTF2A1P52655 376 aaPredicted RBP11.93□□□□□ -0.5
PAN2-221ENST00000610546 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
PAN2-221ENST00000610546 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
PAN2-221ENST00000610546 PLCD4Q9BRC7 762 aa11.93□□□□□ -0.5
PAN2-221ENST00000610546 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
PAN2-221ENST00000610546 CCDC34Q96HJ3 373 aa11.93□□□□□ -0.5
PAN2-221ENST00000610546 KIAA0754O94854 1291 aa11.93□□□□□ -0.5
PAN2-221ENST00000610546 LETM1O95202 739 aaPredicted RBP11.93□□□□□ -0.5
PAN2-221ENST00000610546 PAIP2Q9BPZ3 127 aaKnown RBP11.92□□□□□ -0.5
PAN2-221ENST00000610546 E9PSI1 815 aa11.92□□□□□ -0.5
PAN2-221ENST00000610546 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
PAN2-221ENST00000610546 PRDM10Q9NQV6 1147 aa11.92□□□□□ -0.5
PAN2-221ENST00000610546 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
PAN2-221ENST00000610546 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
PAN2-221ENST00000610546 CFDP1Q9UEE9 299 aaPredicted RBP11.91□□□□□ -0.5
PAN2-221ENST00000610546 TIGD1Q96MW7 591 aa11.91□□□□□ -0.5
PAN2-221ENST00000610546 FHAD1B1AJZ9 1412 aa11.91□□□□□ -0.5
PAN2-221ENST00000610546 CFAP53Q96M91 514 aa11.9□□□□□ -0.5
PAN2-221ENST00000610546 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
PAN2-221ENST00000610546 ST18O60284 1047 aa11.9□□□□□ -0.5
PAN2-221ENST00000610546 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
PAN2-221ENST00000610546 PTPRGP23470 1445 aa11.9□□□□□ -0.5
PAN2-221ENST00000610546 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.51
PAN2-221ENST00000610546 ZRSR2Q15696 482 aaKnown RBP11.89□□□□□ -0.51
PAN2-221ENST00000610546 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
PAN2-221ENST00000610546 RBM28Q9NW13 759 aaKnown RBP11.89□□□□□ -0.51
PAN2-221ENST00000610546 ERICH4A6NGS2 130 aa11.89□□□□□ -0.51
PAN2-221ENST00000610546 BECN2A8MW95 431 aa11.89□□□□□ -0.51
PAN2-221ENST00000610546 U2SURPO15042 1029 aaKnown RBP11.89□□□□□ -0.51
PAN2-221ENST00000610546 CENPQQ7L2Z9 268 aaPredicted RBP11.89□□□□□ -0.51
PAN2-221ENST00000610546 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
PAN2-221ENST00000610546 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
PAN2-221ENST00000610546 GRIN2BQ13224 1484 aa11.88□□□□□ -0.51
PAN2-221ENST00000610546 GOLGA6L7A0A1B0GV03 622 aa11.88□□□□□ -0.51
PAN2-221ENST00000610546 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
PAN2-221ENST00000610546 SENP3-EIF4A1A0A087X0R7 540 aa11.87□□□□□ -0.51
PAN2-221ENST00000610546 FAM69CQ0P6D2 419 aa11.87□□□□□ -0.51
PAN2-221ENST00000610546 TDO2P48775 406 aa11.87□□□□□ -0.51
PAN2-221ENST00000610546 GTPBP4Q9BZE4 634 aaKnown RBP11.87□□□□□ -0.51
PAN2-221ENST00000610546 TULP1O00294 542 aaPredicted RBP11.87□□□□□ -0.51
PAN2-221ENST00000610546 FAM107BQ9H098 131 aa11.86□□□□□ -0.51
PAN2-221ENST00000610546 LMOD3Q0VAK6 560 aa11.86□□□□□ -0.51
PAN2-221ENST00000610546 TPM1P09493 284 aa11.86□□□□□ -0.51
PAN2-221ENST00000610546 CBX1P83916 185 aa11.86□□□□□ -0.51
PAN2-221ENST00000610546 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
PAN2-221ENST00000610546 TRAK2O60296 914 aa11.85□□□□□ -0.51
PAN2-221ENST00000610546 TNNT1P13805 278 aa11.85□□□□□ -0.51
PAN2-221ENST00000610546 IPO4Q8TEX9 1081 aaKnown RBP11.85□□□□□ -0.51
PAN2-221ENST00000610546 FOXD4L1Q9NU39 408 aa11.85□□□□□ -0.51
PAN2-221ENST00000610546 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
PAN2-221ENST00000610546 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
PAN2-221ENST00000610546 RNF20Q5VTR2 975 aa11.84□□□□□ -0.51
PAN2-221ENST00000610546 ZSCAN30Q86W11 494 aa11.84□□□□□ -0.51
PAN2-221ENST00000610546 EIF3JO75822 258 aaKnown RBP11.84□□□□□ -0.51
PAN2-221ENST00000610546 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
PAN2-221ENST00000610546 KNSTRNQ9Y448 316 aa11.84□□□□□ -0.51
PAN2-221ENST00000610546 TPD52L1Q16890 204 aaPredicted RBP11.84□□□□□ -0.51
PAN2-221ENST00000610546 CDCA8Q53HL2 280 aa11.83□□□□□ -0.52
PAN2-221ENST00000610546 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
PAN2-221ENST00000610546 PDE3BQ13370 1112 aa11.83□□□□□ -0.52
PAN2-221ENST00000610546 GOLGA6L10A6NI86 522 aa11.83□□□□□ -0.52
PAN2-221ENST00000610546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.528e-7■■■■□ 20.2
PAN2-221ENST00000610546 GRPEL1Q9HAV7 217 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms