RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 CDK13Q14004 1512 aaKnown RBP11.34□□□□□ -0.59
LMBR1-221ENST00000609774 ABCA6Q8N139 1617 aa11.33□□□□□ -0.6
LMBR1-221ENST00000609774 PLA2R1Q13018 1463 aa11.32□□□□□ -0.6
LMBR1-221ENST00000609774 DIEXFQ68CQ4 756 aaKnown RBP11.32□□□□□ -0.6
LMBR1-221ENST00000609774 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
LMBR1-221ENST00000609774 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
LMBR1-221ENST00000609774 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
LMBR1-221ENST00000609774 CDC42BPBQ9Y5S2 1711 aa11.3□□□□□ -0.6
LMBR1-221ENST00000609774 TROQ12816 1431 aaPredicted RBP11.3□□□□□ -0.6
LMBR1-221ENST00000609774 CDK11AQ9UQ88 783 aaPredicted RBP11.3□□□□□ -0.6
LMBR1-221ENST00000609774 KIF14Q15058 1648 aa11.3□□□□□ -0.6
LMBR1-221ENST00000609774 CAMSAP1Q5T5Y3 1602 aa11.3□□□□□ -0.6
LMBR1-221ENST00000609774 TCOF1Q13428 1488 aaKnown RBP11.3□□□□□ -0.6
LMBR1-221ENST00000609774 FMN1Q68DA7 1419 aa11.29□□□□□ -0.6
LMBR1-221ENST00000609774 KIDINS220Q9ULH0 1771 aa11.28□□□□□ -0.6
LMBR1-221ENST00000609774 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
LMBR1-221ENST00000609774 ABCC1P33527 1531 aa11.28□□□□□ -0.6
LMBR1-221ENST00000609774 ARHGAP5Q13017 1502 aa11.27□□□□□ -0.61
LMBR1-221ENST00000609774 PKD2Q13563 968 aa11.27□□□□□ -0.61
LMBR1-221ENST00000609774 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
LMBR1-221ENST00000609774 EHMT2Q96KQ7 1210 aa11.26□□□□□ -0.61
LMBR1-221ENST00000609774 PREX2Q70Z35 1606 aa11.26□□□□□ -0.61
LMBR1-221ENST00000609774 ITSN2Q9NZM3 1697 aa11.26□□□□□ -0.61
LMBR1-221ENST00000609774 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
LMBR1-221ENST00000609774 CLIP1P30622 1438 aa11.25□□□□□ -0.61
LMBR1-221ENST00000609774 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
LMBR1-221ENST00000609774 ESF1Q9H501 851 aaKnown RBP11.24□□□□□ -0.61
LMBR1-221ENST00000609774 ZNF335Q9H4Z2 1342 aaPredicted RBP11.24□□□□□ -0.61
LMBR1-221ENST00000609774 MED1Q15648 1581 aaPredicted RBP11.24□□□□□ -0.61
LMBR1-221ENST00000609774 UBAP1LF5GYI3 381 aa11.23□□□□□ -0.61
LMBR1-221ENST00000609774 PLXNC1O60486 1568 aa11.23□□□□□ -0.61
LMBR1-221ENST00000609774 MYO3AQ8NEV4 1616 aa11.23□□□□□ -0.61
LMBR1-221ENST00000609774 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
LMBR1-221ENST00000609774 NEUROD1Q13562 356 aa11.22□□□□□ -0.61
LMBR1-221ENST00000609774 PTPRKQ15262 1439 aa11.22□□□□□ -0.61
LMBR1-221ENST00000609774 LRRIQ1Q96JM4 1722 aa11.22□□□□□ -0.61
LMBR1-221ENST00000609774 CEP170BQ9Y4F5 1589 aaPredicted RBP11.22□□□□□ -0.61
LMBR1-221ENST00000609774 CPS1P31327 1500 aa11.21□□□□□ -0.61
LMBR1-221ENST00000609774 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.61
LMBR1-221ENST00000609774 SAMD9LQ8IVG5 1584 aa11.2□□□□□ -0.62
LMBR1-221ENST00000609774 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
LMBR1-221ENST00000609774 CDC42BPAQ5VT25 1732 aa11.19□□□□□ -0.62
LMBR1-221ENST00000609774 SUPT6HQ7KZ85 1726 aaKnown RBP11.19□□□□□ -0.62
LMBR1-221ENST00000609774 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
LMBR1-221ENST00000609774 KIAA1107Q9UPP5 1409 aa11.18□□□□□ -0.62
LMBR1-221ENST00000609774 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
LMBR1-221ENST00000609774 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
LMBR1-221ENST00000609774 CCDC18Q5T9S5 1454 aa11.17□□□□□ -0.62
LMBR1-221ENST00000609774 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
LMBR1-221ENST00000609774 DNMT1P26358 1616 aaKnown RBP11.17□□□□□ -0.62
LMBR1-221ENST00000609774 INO80Q9ULG1 1556 aaPredicted RBP11.16□□□□□ -0.62
LMBR1-221ENST00000609774 TOM1O60784 492 aa11.16□□□□□ -0.62
LMBR1-221ENST00000609774 HSPA1LP34931 641 aa11.16□□□□□ -0.62
LMBR1-221ENST00000609774 RANGAP1P46060 587 aaPredicted RBP11.16□□□□□ -0.62
LMBR1-221ENST00000609774 ALKQ9UM73 1620 aa11.16□□□□□ -0.62
LMBR1-221ENST00000609774 NEURL4Q96JN8 1562 aa11.16□□□□□ -0.62
LMBR1-221ENST00000609774 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.62
LMBR1-221ENST00000609774 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.62
LMBR1-221ENST00000609774 CLSPNQ9HAW4 1339 aa11.15□□□□□ -0.62
LMBR1-221ENST00000609774 SHANK2Q9UPX8 1470 aa11.15□□□□□ -0.62
LMBR1-221ENST00000609774 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.62
LMBR1-221ENST00000609774 ATP7AQ04656 1500 aa11.14□□□□□ -0.63
LMBR1-221ENST00000609774 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
LMBR1-221ENST00000609774 CASKIN1Q8WXD9 1431 aa11.14□□□□□ -0.63
LMBR1-221ENST00000609774 MED14O60244 1454 aa11.13□□□□□ -0.63
LMBR1-221ENST00000609774 A2MP01023 1474 aa11.13□□□□□ -0.63
LMBR1-221ENST00000609774 PLEKHH2Q8IVE3 1493 aa11.13□□□□□ -0.63
LMBR1-221ENST00000609774 VWDEQ8N2E2 1590 aa11.12□□□□□ -0.63
LMBR1-221ENST00000609774 ADGBQ8N7X0 1667 aa11.12□□□□□ -0.63
LMBR1-221ENST00000609774 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
LMBR1-221ENST00000609774 DEPDC5O75140 1603 aa11.12□□□□□ -0.63
LMBR1-221ENST00000609774 SPAG9O60271 1321 aaKnown RBP11.11□□□□□ -0.63
LMBR1-221ENST00000609774 SYCP2Q9BX26 1530 aa11.11□□□□□ -0.63
LMBR1-221ENST00000609774 PRR29P0C7W0 189 aa11.09□□□□□ -0.63
LMBR1-221ENST00000609774 RTEL1-TNFRSF6BF6WH68 1400 aa11.09□□□□□ -0.63
LMBR1-221ENST00000609774 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
LMBR1-221ENST00000609774 PZPP20742 1482 aa11.07□□□□□ -0.64
LMBR1-221ENST00000609774 SYNMO15061 1565 aa11.07□□□□□ -0.64
LMBR1-221ENST00000609774 FYCO1Q9BQS8 1478 aa11.06□□□□□ -0.64
LMBR1-221ENST00000609774 NLRP1Q9C000 1473 aa11.06□□□□□ -0.64
LMBR1-221ENST00000609774 TNRQ92752 1358 aa11.05□□□□□ -0.64
LMBR1-221ENST00000609774 GABBR2O75899 941 aa11.05□□□□□ -0.64
LMBR1-221ENST00000609774 ANKLE2Q86XL3 938 aa11.05□□□□□ -0.64
LMBR1-221ENST00000609774 RNF17Q9BXT8 1623 aaKnown RBP11.05□□□□□ -0.64
LMBR1-221ENST00000609774 MBD5Q9P267 1494 aa11.05□□□□□ -0.64
LMBR1-221ENST00000609774 DHX29Q7Z478 1369 aaKnown RBP11.04□□□□□ -0.64
LMBR1-221ENST00000609774 VPS8Q8N3P4 1428 aa11.04□□□□□ -0.64
LMBR1-221ENST00000609774 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
LMBR1-221ENST00000609774 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
LMBR1-221ENST00000609774 GGT6Q6P531 493 aa11.04□□□□□ -0.64
LMBR1-221ENST00000609774 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
LMBR1-221ENST00000609774 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
LMBR1-221ENST00000609774 STRCP1A6NGW2 1772 aa11.03□□□□□ -0.64
LMBR1-221ENST00000609774 NPHP4O75161 1426 aaPredicted RBP11.03□□□□□ -0.64
LMBR1-221ENST00000609774 RGS17Q9UGC6 210 aaPredicted RBP11.03□□□□□ -0.64
LMBR1-221ENST00000609774 IQGAP1P46940 1657 aa11.03□□□□□ -0.64
LMBR1-221ENST00000609774 KDM5DQ9BY66 1539 aa11.03□□□□□ -0.64
LMBR1-221ENST00000609774 MIA2Q96PC5 1412 aa11.02□□□□□ -0.64
LMBR1-221ENST00000609774 CFDP1Q9UEE9 299 aaPredicted RBP11.01□□□□□ -0.65
LMBR1-221ENST00000609774 UGGT1Q9NYU2 1555 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms