RNA–Protein interactions for RNA: ENST00000609004.1

LINC01125-238, human

TSL 4

Gene LINC01125, Length 1,031 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01125-238	ENST00000609004	CDK13	Q14004	1512 aa	Known RBP	12.32	□□□□□ -0.44
LINC01125-238	ENST00000609004	MED1	Q15648	1581 aa	Predicted RBP	12.32	□□□□□ -0.44
LINC01125-238	ENST00000609004	PKD2	Q13563	968 aa		12.32	□□□□□ -0.44
LINC01125-238	ENST00000609004	PLA2R1	Q13018	1463 aa		12.31	□□□□□ -0.44
LINC01125-238	ENST00000609004	TCOF1	Q13428	1488 aa	Known RBP	12.31	□□□□□ -0.44
LINC01125-238	ENST00000609004	ZMYM3	Q14202	1370 aa		12.3	□□□□□ -0.44
LINC01125-238	ENST00000609004	GABBR2	O75899	941 aa		12.29	□□□□□ -0.44
LINC01125-238	ENST00000609004	ESF1	Q9H501	851 aa	Known RBP	12.29	□□□□□ -0.44
LINC01125-238	ENST00000609004	ABCA6	Q8N139	1617 aa		12.29	□□□□□ -0.44
LINC01125-238	ENST00000609004	RTN4	Q9NQC3	1192 aa	Known RBP	12.28	□□□□□ -0.44
LINC01125-238	ENST00000609004	RANGAP1	P46060	587 aa	Predicted RBP	12.27	□□□□□ -0.45
LINC01125-238	ENST00000609004	CDK11A	Q9UQ88	783 aa	Predicted RBP	12.26	□□□□□ -0.45
LINC01125-238	ENST00000609004	TRO	Q12816	1431 aa	Predicted RBP	12.26	□□□□□ -0.45
LINC01125-238	ENST00000609004	MYO5C	Q9NQX4	1742 aa		12.25	□□□□□ -0.45
LINC01125-238	ENST00000609004	TOM1	O60784	492 aa		12.25	□□□□□ -0.45
LINC01125-238	ENST00000609004	ARHGAP5	Q13017	1502 aa		12.25	□□□□□ -0.45
LINC01125-238	ENST00000609004	KIF14	Q15058	1648 aa		12.24	□□□□□ -0.45
LINC01125-238	ENST00000609004	PTPRK	Q15262	1439 aa		12.24	□□□□□ -0.45
LINC01125-238	ENST00000609004	MYT1L	Q9UL68	1186 aa		12.23	□□□□□ -0.45
LINC01125-238	ENST00000609004	MROH2A	A6NES4	1674 aa		12.22	□□□□□ -0.45
LINC01125-238	ENST00000609004	PIP4K2B	P78356	416 aa		12.22	□□□□□ -0.45
LINC01125-238	ENST00000609004	CD44	P16070	742 aa	Known RBP	12.21	□□□□□ -0.45
LINC01125-238	ENST00000609004	ABCC1	P33527	1531 aa		12.21	□□□□□ -0.46
LINC01125-238	ENST00000609004	KIDINS220	Q9ULH0	1771 aa		12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	ZNF142	P52746	1687 aa	Predicted RBP	12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	ALK	Q9UM73	1620 aa		12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	RGS17	Q9UGC6	210 aa	Predicted RBP	12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	CPS1	P31327	1500 aa		12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	EEA1	Q15075	1411 aa		12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	FMN1	Q68DA7	1419 aa		12.2	□□□□□ -0.46
LINC01125-238	ENST00000609004	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.19	□□□□□ -0.46
LINC01125-238	ENST00000609004	SHANK2	Q9UPX8	1470 aa		12.19	□□□□□ -0.46
LINC01125-238	ENST00000609004	CLIP1	P30622	1438 aa		12.18	□□□□□ -0.46
LINC01125-238	ENST00000609004	MYO3A	Q8NEV4	1616 aa		12.18	□□□□□ -0.46
LINC01125-238	ENST00000609004	CDC42BPB	Q9Y5S2	1711 aa		12.17	□□□□□ -0.46
LINC01125-238	ENST00000609004	A2ML1	A8K2U0	1454 aa		12.16	□□□□□ -0.46
LINC01125-238	ENST00000609004	SAMD9L	Q8IVG5	1584 aa		12.15	□□□□□ -0.46
LINC01125-238	ENST00000609004	PLXNC1	O60486	1568 aa		12.14	□□□□□ -0.47
LINC01125-238	ENST00000609004	ATP1B4	Q9UN42	357 aa	Predicted RBP	12.14	□□□□□ -0.47
LINC01125-238	ENST00000609004	ARHGAP35	Q9NRY4	1499 aa		12.14	□□□□□ -0.47
LINC01125-238	ENST00000609004	NEURL4	Q96JN8	1562 aa		12.13	□□□□□ -0.47
LINC01125-238	ENST00000609004	SPAG9	O60271	1321 aa	Known RBP	12.13	□□□□□ -0.47
LINC01125-238	ENST00000609004	ITSN2	Q9NZM3	1697 aa		12.13	□□□□□ -0.47
LINC01125-238	ENST00000609004	DNMT1	P26358	1616 aa	Known RBP	12.13	□□□□□ -0.47
LINC01125-238	ENST00000609004	PREX2	Q70Z35	1606 aa		12.13	□□□□□ -0.47
LINC01125-238	ENST00000609004	VWDE	Q8N2E2	1590 aa		12.13	□□□□□ -0.47
LINC01125-238	ENST00000609004	A2M	P01023	1474 aa		12.11	□□□□□ -0.47
LINC01125-238	ENST00000609004	KIAA1107	Q9UPP5	1409 aa		12.11	□□□□□ -0.47
LINC01125-238	ENST00000609004	MED14	O60244	1454 aa		12.1	□□□□□ -0.47
LINC01125-238	ENST00000609004	CLTC	Q00610	1675 aa	Known RBP	12.1	□□□□□ -0.47
LINC01125-238	ENST00000609004	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
LINC01125-238	ENST00000609004	LHX8	Q68G74	356 aa		12.09	□□□□□ -0.47
LINC01125-238	ENST00000609004	GGT6	Q6P531	493 aa		12.09	□□□□□ -0.47
LINC01125-238	ENST00000609004	ANKLE2	Q86XL3	938 aa		12.08	□□□□□ -0.48
LINC01125-238	ENST00000609004	STAG3	Q9UJ98	1225 aa		12.08	□□□□□ -0.48
LINC01125-238	ENST00000609004	ATP7A	Q04656	1500 aa		12.07	□□□□□ -0.48
LINC01125-238	ENST00000609004	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.07	□□□□□ -0.48
LINC01125-238	ENST00000609004	SPDYE4	A6NLX3	237 aa		12.07	□□□□□ -0.48
LINC01125-238	ENST00000609004	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.07	□□□□□ -0.48
LINC01125-238	ENST00000609004	LRRC7	Q96NW7	1537 aa		12.06	□□□□□ -0.48
LINC01125-238	ENST00000609004	TNR	Q92752	1358 aa		12.06	□□□□□ -0.48
LINC01125-238	ENST00000609004	POTEA	Q6S8J7	498 aa		12.06	□□□□□ -0.48
LINC01125-238	ENST00000609004	SYCP2	Q9BX26	1530 aa		12.06	□□□□□ -0.48
LINC01125-238	ENST00000609004	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.06	□□□□□ -0.48
LINC01125-238	ENST00000609004	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
LINC01125-238	ENST00000609004	INO80	Q9ULG1	1556 aa	Predicted RBP	12.05	□□□□□ -0.48
LINC01125-238	ENST00000609004	NPHP4	O75161	1426 aa	Predicted RBP	12.05	□□□□□ -0.48
LINC01125-238	ENST00000609004	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.05	□□□□□ -0.48
LINC01125-238	ENST00000609004	LRRIQ1	Q96JM4	1722 aa		12.05	□□□□□ -0.48
LINC01125-238	ENST00000609004	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.04	□□□□□ -0.48
LINC01125-238	ENST00000609004	DEPDC5	O75140	1603 aa		12.04	□□□□□ -0.48
LINC01125-238	ENST00000609004	CASKIN1	Q8WXD9	1431 aa		12.03	□□□□□ -0.48
LINC01125-238	ENST00000609004	CDC42BPA	Q5VT25	1732 aa		12.03	□□□□□ -0.48
LINC01125-238	ENST00000609004	PZP	P20742	1482 aa		12.03	□□□□□ -0.48
LINC01125-238	ENST00000609004	PLEKHH2	Q8IVE3	1493 aa		12.03	□□□□□ -0.48
LINC01125-238	ENST00000609004	POLR1A	O95602	1720 aa	Predicted RBP	12.03	□□□□□ -0.48
LINC01125-238	ENST00000609004	MIA2	Q96PC5	1412 aa		12.03	□□□□□ -0.48
LINC01125-238	ENST00000609004	CCDC18	Q5T9S5	1454 aa		12.02	□□□□□ -0.48
LINC01125-238	ENST00000609004	CREBZF	Q9NS37	354 aa		12.02	□□□□□ -0.49
LINC01125-238	ENST00000609004	ZRANB1	Q9UGI0	708 aa		12.02	□□□□□ -0.49
LINC01125-238	ENST00000609004	DHX29	Q7Z478	1369 aa	Known RBP	12.02	□□□□□ -0.49
LINC01125-238	ENST00000609004	NLRP1	Q9C000	1473 aa		12.02	□□□□□ -0.49
LINC01125-238	ENST00000609004	SLC24A1	O60721	1099 aa		12.01	□□□□□ -0.49
LINC01125-238	ENST00000609004	SRCAP	Q6ZRS2	3230 aa		12	□□□□□ -0.49
LINC01125-238	ENST00000609004	UBTF	P17480	764 aa	Known RBP	12	□□□□□ -0.49
LINC01125-238	ENST00000609004	DCBLD2	Q96PD2	775 aa		12	□□□□□ -0.49
LINC01125-238	ENST00000609004	FBXO3	Q9UK99	471 aa		12	□□□□□ -0.49
LINC01125-238	ENST00000609004	FAM135A	Q9P2D6	1515 aa		12	□□□□□ -0.49
LINC01125-238	ENST00000609004	CLCN6	P51797	869 aa		11.99	□□□□□ -0.49
LINC01125-238	ENST00000609004	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.99	□□□□□ -0.49
LINC01125-238	ENST00000609004	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.99	□□□□□ -0.49
LINC01125-238	ENST00000609004	FAM135B	Q49AJ0	1406 aa		11.99	□□□□□ -0.49
LINC01125-238	ENST00000609004	MBD5	Q9P267	1494 aa		11.99	□□□□□ -0.49
LINC01125-238	ENST00000609004	RNF17	Q9BXT8	1623 aa	Known RBP	11.99	□□□□□ -0.49
LINC01125-238	ENST00000609004	STRCP1	A6NGW2	1772 aa		11.99	□□□□□ -0.49
LINC01125-238	ENST00000609004	POTEI	P0CG38	1075 aa		11.98	□□□□□ -0.49
LINC01125-238	ENST00000609004	UGGT1	Q9NYU2	1555 aa		11.97	□□□□□ -0.49
LINC01125-238	ENST00000609004	SYNM	O15061	1565 aa		11.96	□□□□□ -0.49
LINC01125-238	ENST00000609004	ADGB	Q8N7X0	1667 aa		11.96	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms