RNA–Protein interactions for RNA: ENST00000607772.5

CNKSR3-205, Transcript of CNKSR family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR3, Length 21,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-205ENST00000607772 MRE11P49959 708 aa8.73□□□□□ -1.01
CNKSR3-205ENST00000607772 ARGLU1Q9NWB6 273 aaPredicted RBP8.73□□□□□ -1.01
CNKSR3-205ENST00000607772 ABCC8Q09428 1581 aa8.73□□□□□ -1.01
CNKSR3-205ENST00000607772 NEFHP12036 1026 aa8.72□□□□□ -1.01
CNKSR3-205ENST00000607772 CCDC39Q9UFE4 941 aa8.72□□□□□ -1.01
CNKSR3-205ENST00000607772 NPHP1O15259 732 aa8.72□□□□□ -1.01
CNKSR3-205ENST00000607772 RB1CC1Q8TDY2 1594 aa8.72□□□□□ -1.01
CNKSR3-205ENST00000607772 MLECQ14165 292 aa8.72□□□□□ -1.01
CNKSR3-205ENST00000607772 IRX3P78415 501 aaPredicted RBP8.71□□□□□ -1.01
CNKSR3-205ENST00000607772 CCDC146Q8IYE0 955 aa8.71□□□□□ -1.01
CNKSR3-205ENST00000607772 SETD5Q9C0A6 1442 aa8.71□□□□□ -1.02
CNKSR3-205ENST00000607772 CEP164Q9UPV0 1460 aa8.71□□□□□ -1.02
CNKSR3-205ENST00000607772 NASPP49321 788 aaPredicted RBP8.71□□□□□ -1.02
CNKSR3-205ENST00000607772 TPM3P06753 285 aa8.71□□□□□ -1.02
CNKSR3-205ENST00000607772 BBXQ8WY36 941 aaPredicted RBP8.71□□□□□ -1.02
CNKSR3-205ENST00000607772 SOGA1O94964 1423 aa8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 HEATR1Q9H583 2144 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 CFAP65Q6ZU64 1925 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 TMF1P82094 1093 aa8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 BAZ1BQ9UIG0 1483 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 SPAG17Q6Q759 2223 aa8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 AK7Q96M32 723 aa8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 USP8P40818 1118 aa8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 CCDC70Q6NSX1 233 aa8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 CCDC191Q8NCU4 936 aa8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 HMGB1P09429 215 aaKnown RBP8.7□□□□□ -1.02
CNKSR3-205ENST00000607772 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 RRP12Q5JTH9 1297 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 CCAR2Q8N163 923 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 PKD2Q13563 968 aa8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 HSP90B2PQ58FF3 399 aa8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 KIAA0100Q14667 2235 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 MFAP1P55081 439 aaKnown RBP8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 MAPK8IP2Q13387 824 aaPredicted RBP8.69□□□□□ -1.02
CNKSR3-205ENST00000607772 SETD1BQ9UPS6 1966 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-205ENST00000607772 ITPRIPQ8IWB1 547 aa8.68□□□□□ -1.02
CNKSR3-205ENST00000607772 H0YHG0 523 aa8.68□□□□□ -1.02
CNKSR3-205ENST00000607772 ISY1Q9ULR0 285 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-205ENST00000607772 NCBP3Q53F19 620 aaKnown RBP8.68□□□□□ -1.02
CNKSR3-205ENST00000607772 KIAA1211Q6ZU35 1233 aa8.68□□□□□ -1.02
CNKSR3-205ENST00000607772 U2AF1L5P0DN76 240 aaPredicted RBP8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 U2AF1Q01081 240 aaKnown RBP eCLIP8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 NFKBIBQ15653 356 aa8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 SEC16AO15027 2179 aa8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 UQCRHLA0A096LP55 91 aa8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 UQCRHP07919 91 aa8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 NOL8Q76FK4 1167 aaKnown RBP8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 PDE4AP27815 886 aa8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 GOLGA2Q08379 1002 aa8.67□□□□□ -1.02
CNKSR3-205ENST00000607772 GNL2Q13823 731 aaKnown RBP8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 ST18O60284 1047 aa8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 HMMRO75330 724 aa8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 RAB3GAP2Q9H2M9 1393 aa8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 TPRP12270 2363 aaKnown RBP8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 ASXL3Q9C0F0 2248 aa8.66□□□□□ -1.02
CNKSR3-205ENST00000607772 NUTM2DQ5VT03 806 aaPredicted RBP8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 LEKR1Q6ZMV7 388 aa8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 DDX49Q9Y6V7 483 aaKnown RBP8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 CCDC34Q96HJ3 373 aa8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 RRP7AQ9Y3A4 280 aaKnown RBP8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 HSP90AB3PQ58FF7 597 aa8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 CCDC173Q0VFZ6 552 aa8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 CITO14578 2027 aa8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 CLUAP1Q96AJ1 413 aa8.65□□□□□ -1.02
CNKSR3-205ENST00000607772 KTN1Q86UP2 1357 aaKnown RBP8.65□□□□□ -1.03
CNKSR3-205ENST00000607772 DCTN1Q14203 1278 aa8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 INCENPQ9NQS7 918 aa8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 HSP90B1P14625 803 aaKnown RBP8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 RWDD1Q9H446 243 aaPredicted RBP8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 RBM10P98175 930 aaKnown RBP8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 PLIN1O60240 522 aa8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 CLSTN1O94985 981 aa8.64□□□□□ -1.03
CNKSR3-205ENST00000607772 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 DYDC1Q8WWB3 177 aa8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 ROCK2O75116 1388 aaKnown RBP8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 CALCOCO1Q9P1Z2 691 aa8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 CARMIL1Q5VZK9 1371 aa8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 CDR1P51861 262 aa8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 KIF3AQ9Y496 699 aa8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 FOXD4L6Q3SYB3 417 aaPredicted RBP8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 FOXD4L3Q6VB84 417 aaPredicted RBP8.63□□□□□ -1.03
CNKSR3-205ENST00000607772 RTF1Q92541 710 aaKnown RBP8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 CECR2Q9BXF3 1484 aa8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 WIZO95785 1651 aa8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 MYO7AQ13402 2215 aa8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 GOLGA6L19H0YKK7 550 aa8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 ARHGAP35Q9NRY4 1499 aa8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 GIMAP7Q8NHV1 300 aa8.62□□□□□ -1.03
CNKSR3-205ENST00000607772 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
CNKSR3-205ENST00000607772 ESPNB1AK53 854 aa8.61□□□□□ -1.03
CNKSR3-205ENST00000607772 PES1O00541 588 aaKnown RBP8.61□□□□□ -1.03
CNKSR3-205ENST00000607772 MPHOSPH9Q99550 1183 aa8.61□□□□□ -1.03
CNKSR3-205ENST00000607772 CUX2O14529 1486 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms