RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 KIAA1107Q9UPP5 1409 aa7.07□□□□□ -1.28
SCARNA15-201ENST00000607520 UHRF1BP1Q6BDS2 1440 aa7.07□□□□□ -1.28
SCARNA15-201ENST00000607520 TSPOAP1O95153 1857 aa7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 A2MP01023 1474 aa7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 GPATCH8Q9UKJ3 1502 aaKnown RBP7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 STAC3Q96MF2 364 aa7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 SLC26A8Q96RN1 970 aa7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 TIAM1Q13009 1591 aa7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 ZNF316A6NFI3 1004 aaPredicted RBP7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 FBXO31Q5XUX0 539 aaPredicted RBP7.06□□□□□ -1.28
SCARNA15-201ENST00000607520 NPM2Q86SE8 214 aaKnown RBP7.05□□□□□ -1.28
SCARNA15-201ENST00000607520 NUTM2FA1L443 756 aa7.05□□□□□ -1.28
SCARNA15-201ENST00000607520 CAMSAP2Q08AD1 1489 aa7.05□□□□□ -1.28
SCARNA15-201ENST00000607520 EIF4G2P78344 907 aaKnown RBP eCLIP7.05□□□□□ -1.28
SCARNA15-201ENST00000607520 ABCA8O94911 1581 aa7.04□□□□□ -1.28
SCARNA15-201ENST00000607520 TRAPPC8Q9Y2L5 1435 aa7.04□□□□□ -1.28
SCARNA15-201ENST00000607520 HDGFL2Q7Z4V5 671 aaPredicted RBP7.04□□□□□ -1.28
SCARNA15-201ENST00000607520 FAM135AQ9P2D6 1515 aa7.04□□□□□ -1.28
SCARNA15-201ENST00000607520 ZMYM3Q14202 1370 aa7.04□□□□□ -1.28
SCARNA15-201ENST00000607520 DAPK1P53355 1430 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 MAGI3Q5TCQ9 1506 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 CNKSR2Q8WXI2 1034 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 RAB3GAP2Q9H2M9 1393 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 MAGI2Q86UL8 1455 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 TRAK1Q9UPV9 953 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 CFAP74Q9C0B2 1584 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 CSB-PGBD3P0DP91 1061 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 MAPKBP1O60336 1514 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 ZFYVE16Q7Z3T8 1539 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 DHX57Q6P158 1386 aaKnown RBP7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 NPM3O75607 178 aaKnown RBP7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 PSME1Q06323 249 aa7.03□□□□□ -1.28
SCARNA15-201ENST00000607520 EIF3AQ14152 1382 aaKnown RBP7.02□□□□□ -1.29
SCARNA15-201ENST00000607520 TMF1P82094 1093 aa7.02□□□□□ -1.29
SCARNA15-201ENST00000607520 SIN3AQ96ST3 1273 aa7.02□□□□□ -1.29
SCARNA15-201ENST00000607520 MAP3K1Q13233 1512 aa7.01□□□□□ -1.29
SCARNA15-201ENST00000607520 RPGRIP1LQ68CZ1 1315 aa7.01□□□□□ -1.29
SCARNA15-201ENST00000607520 ZCCHC11Q5TAX3 1644 aaKnown RBP7.01□□□□□ -1.29
SCARNA15-201ENST00000607520 IDI1Q13907 227 aa7.01□□□□□ -1.29
SCARNA15-201ENST00000607520 SOX12O15370 315 aa7.01□□□□□ -1.29
SCARNA15-201ENST00000607520 RTEL1-TNFRSF6BF6WH68 1400 aa7.01□□□□□ -1.29
SCARNA15-201ENST00000607520 SYCP2Q9BX26 1530 aa7□□□□□ -1.29
SCARNA15-201ENST00000607520 SAMD9Q5K651 1589 aa7□□□□□ -1.29
SCARNA15-201ENST00000607520 PPM1GO15355 546 aaPredicted RBP7□□□□□ -1.29
SCARNA15-201ENST00000607520 NCKAP5LQ9HCH0 1330 aa7□□□□□ -1.29
SCARNA15-201ENST00000607520 EVA1CP58658 441 aa7□□□□□ -1.29
SCARNA15-201ENST00000607520 TERF2IPQ9NYB0 399 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 TIMELESSQ9UNS1 1208 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 ROCK1Q13464 1354 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 HFM1A2PYH4 1435 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 KNSTRNQ9Y448 316 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 LMTK3Q96Q04 1460 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 ABCC5O15440 1437 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 ESCO1Q5FWF5 840 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 CADPS2Q86UW7 1296 aa6.99□□□□□ -1.29
SCARNA15-201ENST00000607520 ROCK2O75116 1388 aaKnown RBP6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 MINK1Q8N4C8 1332 aaPredicted RBP6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 NUTM2BA6NNL0 878 aaPredicted RBP6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 NUTM2EB1AL46 878 aaPredicted RBP6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 NUTM2AQ8IVF1 878 aaPredicted RBP6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 ADCY10Q96PN6 1610 aa6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 RRBP1Q9P2E9 1410 aaKnown RBP6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 YEATS2Q9ULM3 1422 aa6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 ITSN2Q9NZM3 1697 aa6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 CLSPNQ9HAW4 1339 aa6.98□□□□□ -1.29
SCARNA15-201ENST00000607520 ANP32CO43423 234 aa6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 CFAP53Q96M91 514 aa6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 GTF3C3Q9Y5Q9 886 aa6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 MSH6P52701 1360 aa6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 GPRASP1Q5JY77 1395 aa6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 SHROOM2Q13796 1616 aa6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 NCOA1Q15788 1441 aa6.97□□□□□ -1.29
SCARNA15-201ENST00000607520 EVC2Q86UK5 1308 aa6.96□□□□□ -1.29
SCARNA15-201ENST00000607520 AMOTL2Q9Y2J4 779 aa6.96□□□□□ -1.29
SCARNA15-201ENST00000607520 ANKRD30BQ9BXX2 1392 aa6.96□□□□□ -1.29
SCARNA15-201ENST00000607520 NEFLP07196 543 aa6.96□□□□□ -1.3
SCARNA15-201ENST00000607520 DUOX2Q9NRD8 1548 aa6.96□□□□□ -1.3
SCARNA15-201ENST00000607520 SF3B2Q13435 895 aaKnown RBP6.96□□□□□ -1.3
SCARNA15-201ENST00000607520 HIRIP3Q9BW71 556 aaPredicted RBP6.96□□□□□ -1.3
SCARNA15-201ENST00000607520 MAPK8IP2Q13387 824 aaPredicted RBP6.95□□□□□ -1.3
SCARNA15-201ENST00000607520 L3MBTL2Q969R5 705 aa6.95□□□□□ -1.3
SCARNA15-201ENST00000607520 TMEM132EQ6IEE7 984 aa6.95□□□□□ -1.3
SCARNA15-201ENST00000607520 PTPN23Q9H3S7 1636 aa6.95□□□□□ -1.3
SCARNA15-201ENST00000607520 ATP7AQ04656 1500 aa6.95□□□□□ -1.3
SCARNA15-201ENST00000607520 ERBINQ96RT1 1412 aa6.95□□□□□ -1.3
SCARNA15-201ENST00000607520 MLH3Q9UHC1 1453 aa6.94□□□□□ -1.3
SCARNA15-201ENST00000607520 NUDCQ9Y266 331 aa6.94□□□□□ -1.3
SCARNA15-201ENST00000607520 CFAP70Q5T0N1 1121 aa6.93□□□□□ -1.3
SCARNA15-201ENST00000607520 CFAP43Q8NDM7 1665 aa6.93□□□□□ -1.3
SCARNA15-201ENST00000607520 ARAP3Q8WWN8 1544 aa6.93□□□□□ -1.3
SCARNA15-201ENST00000607520 AMPHP49418 695 aa6.93□□□□□ -1.3
SCARNA15-201ENST00000607520 CENPJQ9HC77 1338 aaPredicted RBP6.93□□□□□ -1.3
SCARNA15-201ENST00000607520 MYO5CQ9NQX4 1742 aa6.93□□□□□ -1.3
SCARNA15-201ENST00000607520 DIP2BQ9P265 1576 aa6.92□□□□□ -1.3
SCARNA15-201ENST00000607520 GLI2P10070 1586 aa6.92□□□□□ -1.3
SCARNA15-201ENST00000607520 PRAM1Q96QH2 718 aa6.92□□□□□ -1.3
SCARNA15-201ENST00000607520 WDR43Q15061 677 aaKnown RBP eCLIP6.92□□□□□ -1.3
SCARNA15-201ENST00000607520 NGLY1Q96IV0 654 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms