RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
RPF2-204ENST00000607388 NUP160Q12769 1436 aa8.47□□□□□ -1.05
RPF2-204ENST00000607388 PPM1GO15355 546 aaPredicted RBP8.47□□□□□ -1.05
RPF2-204ENST00000607388 CUL7Q14999 1698 aa8.47□□□□□ -1.05
RPF2-204ENST00000607388 HOMEZQ8IX15 550 aa8.46□□□□□ -1.05
RPF2-204ENST00000607388 APAF1O14727 1248 aa8.46□□□□□ -1.06
RPF2-204ENST00000607388 PODXL2Q9NZ53 605 aa8.46□□□□□ -1.06
RPF2-204ENST00000607388 PLB1Q6P1J6 1458 aa8.46□□□□□ -1.06
RPF2-204ENST00000607388 IQGAP2Q13576 1575 aa8.45□□□□□ -1.06
RPF2-204ENST00000607388 NLRP13Q86W25 1043 aa8.45□□□□□ -1.06
RPF2-204ENST00000607388 COG6Q9Y2V7 657 aa8.45□□□□□ -1.06
RPF2-204ENST00000607388 BCAR3O75815 825 aa8.44□□□□□ -1.06
RPF2-204ENST00000607388 MYBBP1AQ9BQG0 1328 aaKnown RBP8.44□□□□□ -1.06
RPF2-204ENST00000607388 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
RPF2-204ENST00000607388 ZBTB7CA1YPR0 619 aa8.44□□□□□ -1.06
RPF2-204ENST00000607388 FRAT2O75474 233 aaPredicted RBP8.44□□□□□ -1.06
RPF2-204ENST00000607388 FOXD4L1Q9NU39 408 aa8.43□□□□□ -1.06
RPF2-204ENST00000607388 ARHGEF11O15085 1522 aa8.43□□□□□ -1.06
RPF2-204ENST00000607388 PANK1Q8TE04 598 aa8.43□□□□□ -1.06
RPF2-204ENST00000607388 FYCO1Q9BQS8 1478 aa8.43□□□□□ -1.06
RPF2-204ENST00000607388 ERICH6BQ5W0A0 696 aa8.43□□□□□ -1.06
RPF2-204ENST00000607388 TCERG1O14776 1098 aaKnown RBP8.42□□□□□ -1.06
RPF2-204ENST00000607388 ANKRD30BQ9BXX2 1392 aa8.42□□□□□ -1.06
RPF2-204ENST00000607388 PTPN23Q9H3S7 1636 aa8.42□□□□□ -1.06
RPF2-204ENST00000607388 TMF1P82094 1093 aa8.42□□□□□ -1.06
RPF2-204ENST00000607388 NFKBIBQ15653 356 aa8.42□□□□□ -1.06
RPF2-204ENST00000607388 FAM69CQ0P6D2 419 aa8.41□□□□□ -1.06
RPF2-204ENST00000607388 U2SURPO15042 1029 aaKnown RBP8.41□□□□□ -1.06
RPF2-204ENST00000607388 DISP1Q96F81 1524 aa8.41□□□□□ -1.06
RPF2-204ENST00000607388 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
RPF2-204ENST00000607388 KDM6BO15054 1643 aa8.4□□□□□ -1.06
RPF2-204ENST00000607388 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.4□□□□□ -1.06
RPF2-204ENST00000607388 STK26Q9P289 416 aa8.4□□□□□ -1.06
RPF2-204ENST00000607388 NCOA1Q15788 1441 aa8.4□□□□□ -1.06
RPF2-204ENST00000607388 KIF15Q9NS87 1388 aa8.4□□□□□ -1.06
RPF2-204ENST00000607388 RALBP1Q15311 655 aa8.4□□□□□ -1.06
RPF2-204ENST00000607388 TRAK1Q9UPV9 953 aa8.39□□□□□ -1.07
RPF2-204ENST00000607388 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
RPF2-204ENST00000607388 ANKRD30AQ9BXX3 1397 aa8.39□□□□□ -1.07
RPF2-204ENST00000607388 APBB1O00213 710 aa8.39□□□□□ -1.07
RPF2-204ENST00000607388 HSP90AA1P07900 732 aaKnown RBP8.39□□□□□ -1.07
RPF2-204ENST00000607388 ARID3AQ99856 593 aa8.39□□□□□ -1.07
RPF2-204ENST00000607388 ELL2O00472 640 aaPredicted RBP8.38□□□□□ -1.07
RPF2-204ENST00000607388 SOX12O15370 315 aa8.38□□□□□ -1.07
RPF2-204ENST00000607388 TNNQ9UQP3 1299 aa8.37□□□□□ -1.07
RPF2-204ENST00000607388 GGT6Q6P531 493 aa8.37□□□□□ -1.07
RPF2-204ENST00000607388 ABCC5O15440 1437 aa8.37□□□□□ -1.07
RPF2-204ENST00000607388 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
RPF2-204ENST00000607388 MFAP1P55081 439 aaKnown RBP8.37□□□□□ -1.07
RPF2-204ENST00000607388 GSE1Q14687 1217 aa8.37□□□□□ -1.07
RPF2-204ENST00000607388 TMEM132EQ6IEE7 984 aa8.37□□□□□ -1.07
RPF2-204ENST00000607388 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
RPF2-204ENST00000607388 DAPK1P53355 1430 aa8.36□□□□□ -1.07
RPF2-204ENST00000607388 SMG6Q86US8 1419 aaKnown RBP8.36□□□□□ -1.07
RPF2-204ENST00000607388 SPINK5Q9NQ38 1064 aaPredicted RBP8.36□□□□□ -1.07
RPF2-204ENST00000607388 CLASP1Q7Z460 1538 aa8.36□□□□□ -1.07
RPF2-204ENST00000607388 AFAP1Q8N556 730 aa8.36□□□□□ -1.07
RPF2-204ENST00000607388 EPRSP07814 1512 aaKnown RBP8.35□□□□□ -1.07
RPF2-204ENST00000607388 UPF2Q9HAU5 1272 aaKnown RBP8.35□□□□□ -1.07
RPF2-204ENST00000607388 MAGI3Q5TCQ9 1506 aa8.35□□□□□ -1.07
RPF2-204ENST00000607388 KIF3BO15066 747 aa8.35□□□□□ -1.07
RPF2-204ENST00000607388 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
RPF2-204ENST00000607388 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
RPF2-204ENST00000607388 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
RPF2-204ENST00000607388 FTSJ3Q8IY81 847 aaKnown RBP8.35□□□□□ -1.07
RPF2-204ENST00000607388 RIMBP3CA6NJZ7 1639 aa8.35□□□□□ -1.07
RPF2-204ENST00000607388 RIMBP3BA6NNM3 1639 aa8.35□□□□□ -1.07
RPF2-204ENST00000607388 RIMBP3Q9UFD9 1639 aa8.35□□□□□ -1.07
RPF2-204ENST00000607388 DHX29Q7Z478 1369 aaKnown RBP8.34□□□□□ -1.07
RPF2-204ENST00000607388 KIAA0556O60303 1618 aa8.34□□□□□ -1.07
RPF2-204ENST00000607388 MORC1Q86VD1 984 aa8.34□□□□□ -1.07
RPF2-204ENST00000607388 DMRT2Q9Y5R5 561 aa8.34□□□□□ -1.07
RPF2-204ENST00000607388 POGKQ9P215 609 aa8.34□□□□□ -1.08
RPF2-204ENST00000607388 CTTNBP2Q8WZ74 1663 aa8.33□□□□□ -1.08
RPF2-204ENST00000607388 UGGT2Q9NYU1 1516 aa8.33□□□□□ -1.08
RPF2-204ENST00000607388 CCDC144AA2RUR9 1427 aa8.33□□□□□ -1.08
RPF2-204ENST00000607388 SEC24BO95487 1268 aa8.33□□□□□ -1.08
RPF2-204ENST00000607388 PPP2R1AP30153 589 aa8.33□□□□□ -1.08
RPF2-204ENST00000607388 FAM161AQ3B820 660 aa8.33□□□□□ -1.08
RPF2-204ENST00000607388 NAP1L5Q96NT1 182 aaPredicted RBP8.33□□□□□ -1.08
RPF2-204ENST00000607388 NCLP19338 710 aaKnown RBP8.33□□□□□ -1.08
RPF2-204ENST00000607388 RPRD2Q5VT52 1461 aaKnown RBP8.32□□□□□ -1.08
RPF2-204ENST00000607388 DISP3Q9P2K9 1392 aa8.32□□□□□ -1.08
RPF2-204ENST00000607388 IGHDP01880 384 aa8.32□□□□□ -1.08
RPF2-204ENST00000607388 KCNA4P22459 653 aa8.32□□□□□ -1.08
RPF2-204ENST00000607388 FBLN1P23142 703 aa8.32□□□□□ -1.08
RPF2-204ENST00000607388 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
RPF2-204ENST00000607388 TSR2Q969E8 191 aaKnown RBP8.31□□□□□ -1.08
RPF2-204ENST00000607388 SUPT6HQ7KZ85 1726 aaKnown RBP8.31□□□□□ -1.08
RPF2-204ENST00000607388 SLC12A5Q9H2X9 1139 aa8.31□□□□□ -1.08
RPF2-204ENST00000607388 KIAA1107Q9UPP5 1409 aa8.31□□□□□ -1.08
RPF2-204ENST00000607388 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
RPF2-204ENST00000607388 ITPRIPQ8IWB1 547 aa8.31□□□□□ -1.08
RPF2-204ENST00000607388 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
RPF2-204ENST00000607388 DENND4BO75064 1496 aaPredicted RBP8.31□□□□□ -1.08
RPF2-204ENST00000607388 MAP3K1Q13233 1512 aa8.3□□□□□ -1.08
RPF2-204ENST00000607388 ATP10BO94823 1461 aa8.3□□□□□ -1.08
RPF2-204ENST00000607388 NUP153P49790 1475 aaKnown RBP8.3□□□□□ -1.08
RPF2-204ENST00000607388 EFCAB5A4FU69 1503 aa8.3□□□□□ -1.08
RPF2-204ENST00000607388 TAOK2Q9UL54 1235 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms