RNA–Protein interactions for RNA: ENST00000605467.1

PBX1-220, Transcript of PBX homeobox 1, humanhuman

Gene PBX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-220ENST00000605467 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
PBX1-220ENST00000605467 DOK7Q18PE1 504 aa10.21□□□□□ -0.77
PBX1-220ENST00000605467 FAM117AQ9C073 453 aa10.21□□□□□ -0.77
PBX1-220ENST00000605467 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
PBX1-220ENST00000605467 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
PBX1-220ENST00000605467 NUDT7P0C024 238 aa10.18□□□□□ -0.78
PBX1-220ENST00000605467 ARSIQ5FYB1 569 aa10.18□□□□□ -0.78
PBX1-220ENST00000605467 C6orf132Q5T0Z8 1188 aa10.18□□□□□ -0.78
PBX1-220ENST00000605467 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
PBX1-220ENST00000605467 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
PBX1-220ENST00000605467 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
PBX1-220ENST00000605467 ZDHHC16Q969W1 377 aa10.17□□□□□ -0.78
PBX1-220ENST00000605467 TMUB1Q9BVT8 246 aa10.17□□□□□ -0.78
PBX1-220ENST00000605467 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
PBX1-220ENST00000605467 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
PBX1-220ENST00000605467 RIMBP2O15034 1052 aa10.15□□□□□ -0.78
PBX1-220ENST00000605467 ZNF454Q8N9F8 522 aa10.15□□□□□ -0.78
PBX1-220ENST00000605467 TTC13Q8NBP0 860 aa10.15□□□□□ -0.78
PBX1-220ENST00000605467 REPIN1Q9BWE0 567 aaKnown RBP10.15□□□□□ -0.78
PBX1-220ENST00000605467 C14orf37Q86TY3 774 aa10.14□□□□□ -0.79
PBX1-220ENST00000605467 PHOX2BQ99453 314 aa10.14□□□□□ -0.79
PBX1-220ENST00000605467 SCUBE2Q9NQ36 999 aa10.14□□□□□ -0.79
PBX1-220ENST00000605467 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
PBX1-220ENST00000605467 TTLL12Q14166 644 aaPredicted RBP10.12□□□□□ -0.79
PBX1-220ENST00000605467 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
PBX1-220ENST00000605467 RBM27Q9P2N5 1060 aaKnown RBP10.12□□□□□ -0.79
PBX1-220ENST00000605467 MS4A1P11836 297 aa10.11□□□□□ -0.79
PBX1-220ENST00000605467 PADI6Q6TGC4 694 aa10.1□□□□□ -0.79
PBX1-220ENST00000605467 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
PBX1-220ENST00000605467 LHX6Q9UPM6 363 aa10.1□□□□□ -0.79
PBX1-220ENST00000605467 OATP04181 439 aa10.09□□□□□ -0.79
PBX1-220ENST00000605467 CLCN1P35523 988 aa10.09□□□□□ -0.79
PBX1-220ENST00000605467 METTL3Q86U44 580 aaKnown RBP10.09□□□□□ -0.79
PBX1-220ENST00000605467 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
PBX1-220ENST00000605467 ADGRG1Q9Y653 693 aa10.09□□□□□ -0.79
PBX1-220ENST00000605467 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
PBX1-220ENST00000605467 PSDA5PKW4 1024 aaPredicted RBP10.07□□□□□ -0.8
PBX1-220ENST00000605467 PRSS12P56730 875 aa10.07□□□□□ -0.8
PBX1-220ENST00000605467 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
PBX1-220ENST00000605467 PXYLP1Q8TE99 480 aa10.07□□□□□ -0.8
PBX1-220ENST00000605467 MDM2Q00987 491 aaPredicted RBP10.06□□□□□ -0.8
PBX1-220ENST00000605467 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
PBX1-220ENST00000605467 CDCA7LQ96GN5 454 aa10.05□□□□□ -0.8
PBX1-220ENST00000605467 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
PBX1-220ENST00000605467 SNPHO15079 494 aa10.04□□□□□ -0.8
PBX1-220ENST00000605467 SSTR3P32745 418 aaPredicted RBP10.04□□□□□ -0.8
PBX1-220ENST00000605467 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
PBX1-220ENST00000605467 COL9A1P20849 921 aa10.03□□□□□ -0.8
PBX1-220ENST00000605467 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
PBX1-220ENST00000605467 FAM198AQ9UFP1 575 aa10.02□□□□□ -0.81
PBX1-220ENST00000605467 EYA1Q99502 592 aa10□□□□□ -0.81
PBX1-220ENST00000605467 PPP1R3GB7ZBB8 358 aa9.99□□□□□ -0.81
PBX1-220ENST00000605467 PTPREP23469 700 aa9.99□□□□□ -0.81
PBX1-220ENST00000605467 SH3D19Q5HYK7 790 aa9.99□□□□□ -0.81
PBX1-220ENST00000605467 RBM46Q8TBY0 533 aaKnown RBP9.99□□□□□ -0.81
PBX1-220ENST00000605467 NLRP7Q8WX94 980 aa9.99□□□□□ -0.81
PBX1-220ENST00000605467 OTUD5Q96G74 571 aa9.98□□□□□ -0.81
PBX1-220ENST00000605467 TSKSQ9UJT2 592 aa9.98□□□□□ -0.81
PBX1-220ENST00000605467 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
PBX1-220ENST00000605467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.82
PBX1-220ENST00000605467 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
PBX1-220ENST00000605467 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
PBX1-220ENST00000605467 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
PBX1-220ENST00000605467 PCMTD1Q96MG8 357 aaPredicted RBP9.95□□□□□ -0.82
PBX1-220ENST00000605467 RCCD1A6NED2 376 aa9.94□□□□□ -0.82
PBX1-220ENST00000605467 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
PBX1-220ENST00000605467 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
PBX1-220ENST00000605467 ZMYND15Q9H091 742 aa9.93□□□□□ -0.82
PBX1-220ENST00000605467 NUDT18Q6ZVK8 323 aa9.92□□□□□ -0.82
PBX1-220ENST00000605467 TATDN2Q93075 761 aa9.91□□□□□ -0.82
PBX1-220ENST00000605467 FLIIQ13045 1269 aa9.9□□□□□ -0.82
PBX1-220ENST00000605467 PACS2Q86VP3 889 aa9.9□□□□□ -0.82
PBX1-220ENST00000605467 NBPF26B4DH59 902 aa9.89□□□□□ -0.83
PBX1-220ENST00000605467 MYSM1Q5VVJ2 828 aa9.89□□□□□ -0.83
PBX1-220ENST00000605467 PNMA3Q9UL41 463 aa9.89□□□□□ -0.83
PBX1-220ENST00000605467 CD46P15529 392 aa9.88□□□□□ -0.83
PBX1-220ENST00000605467 DNAJB2P25686 324 aa9.88□□□□□ -0.83
PBX1-220ENST00000605467 PROCA1Q8NCQ7 364 aaPredicted RBP9.88□□□□□ -0.83
PBX1-220ENST00000605467 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.88□□□□□ -0.83
PBX1-220ENST00000605467 DIXDC1Q155Q3 683 aa9.87□□□□□ -0.83
PBX1-220ENST00000605467 PROX2Q3B8N5 592 aa9.87□□□□□ -0.83
PBX1-220ENST00000605467 KCNK17Q96T54 332 aa9.87□□□□□ -0.83
PBX1-220ENST00000605467 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
PBX1-220ENST00000605467 TBC1D2Q9BYX2 928 aa9.87□□□□□ -0.83
PBX1-220ENST00000605467 TMEM134Q9H6X4 195 aa9.87□□□□□ -0.83
PBX1-220ENST00000605467 SUPT5HO00267 1087 aaKnown RBP9.86□□□□□ -0.83
PBX1-220ENST00000605467 POLR3EQ9NVU0 708 aa9.86□□□□□ -0.83
PBX1-220ENST00000605467 LHX8Q68G74 356 aa9.85□□□□□ -0.83
PBX1-220ENST00000605467 POTEEQ6S8J3 1075 aa9.85□□□□□ -0.83
PBX1-220ENST00000605467 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
PBX1-220ENST00000605467 SLC4A5Q9BY07 1137 aa9.85□□□□□ -0.83
PBX1-220ENST00000605467 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
PBX1-220ENST00000605467 KIAA1468Q9P260 1216 aa9.84□□□□□ -0.83
PBX1-220ENST00000605467 SMAPO00193 183 aa9.83□□□□□ -0.84
PBX1-220ENST00000605467 ARHGAP33O14559 1287 aa9.83□□□□□ -0.84
PBX1-220ENST00000605467 CLK2P49760 499 aaKnown RBP9.83□□□□□ -0.84
PBX1-220ENST00000605467 PSEN2P49810 448 aa9.83□□□□□ -0.84
PBX1-220ENST00000605467 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
PBX1-220ENST00000605467 KCNH8Q96L42 1107 aa9.82□□□□□ -0.84
PBX1-220ENST00000605467 DDX11L8A8MPP1 907 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms