RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 POGKQ9P215 609 aa16.24■□□□□ 0.19
CDCA3-212ENST00000604599 PARD3Q8TEW0 1356 aa16.22■□□□□ 0.19
CDCA3-212ENST00000604599 E9PCH4 1651 aa16.22■□□□□ 0.19
CDCA3-212ENST00000604599 RRAGDQ9NQL2 400 aaPredicted RBP16.21■□□□□ 0.19
CDCA3-212ENST00000604599 CC2D1BQ5T0F9 858 aaKnown RBP16.21■□□□□ 0.18
CDCA3-212ENST00000604599 PKNOX2Q96KN3 472 aa16.19■□□□□ 0.18
CDCA3-212ENST00000604599 ARXQ96QS3 562 aa16.19■□□□□ 0.18
CDCA3-212ENST00000604599 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
CDCA3-212ENST00000604599 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
CDCA3-212ENST00000604599 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
CDCA3-212ENST00000604599 BLMP54132 1417 aaPredicted RBP16.17■□□□□ 0.18
CDCA3-212ENST00000604599 WDR62O43379 1518 aa16.16■□□□□ 0.18
CDCA3-212ENST00000604599 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
CDCA3-212ENST00000604599 KIAA0586Q9BVV6 1533 aa16.14■□□□□ 0.17
CDCA3-212ENST00000604599 PER1O15534 1290 aaPredicted RBP16.14■□□□□ 0.17
CDCA3-212ENST00000604599 ZNF777Q9ULD5 760 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-212ENST00000604599 ZMYM4Q5VZL5 1548 aa16.13■□□□□ 0.17
CDCA3-212ENST00000604599 NAP1L5Q96NT1 182 aaPredicted RBP16.1■□□□□ 0.17
CDCA3-212ENST00000604599 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
CDCA3-212ENST00000604599 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
CDCA3-212ENST00000604599 GLIPR1L2Q4G1C9 344 aa16.1■□□□□ 0.17
CDCA3-212ENST00000604599 DUSP27Q5VZP5 1158 aa16.1■□□□□ 0.17
CDCA3-212ENST00000604599 ARHGEF12Q9NZN5 1544 aa16.1■□□□□ 0.17
CDCA3-212ENST00000604599 USP19O94966 1318 aa16.09■□□□□ 0.17
CDCA3-212ENST00000604599 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
CDCA3-212ENST00000604599 CAMSAP2Q08AD1 1489 aa16.09■□□□□ 0.17
CDCA3-212ENST00000604599 L1TD1Q5T7N2 865 aaKnown RBP16.09■□□□□ 0.17
CDCA3-212ENST00000604599 CFDP1Q9UEE9 299 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-212ENST00000604599 NUP155O75694 1391 aa16.09■□□□□ 0.17
CDCA3-212ENST00000604599 PLEKHH1Q9ULM0 1364 aa16.09■□□□□ 0.17
CDCA3-212ENST00000604599 IQGAP2Q13576 1575 aa16.08■□□□□ 0.17
CDCA3-212ENST00000604599 ZNF608Q9ULD9 1512 aaPredicted RBP16.08■□□□□ 0.17
CDCA3-212ENST00000604599 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.17
CDCA3-212ENST00000604599 SEC24BO95487 1268 aa16.08■□□□□ 0.16
CDCA3-212ENST00000604599 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
CDCA3-212ENST00000604599 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.16
CDCA3-212ENST00000604599 ANKRD50Q9ULJ7 1429 aa16.07■□□□□ 0.16
CDCA3-212ENST00000604599 PANK3Q9H999 370 aa16.07■□□□□ 0.16
CDCA3-212ENST00000604599 BECN1Q14457 450 aa16.05■□□□□ 0.16
CDCA3-212ENST00000604599 INSRP06213 1382 aa16.05■□□□□ 0.16
CDCA3-212ENST00000604599 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
CDCA3-212ENST00000604599 NBPF1Q3BBV0 1214 aa16.05■□□□□ 0.16
CDCA3-212ENST00000604599 PNNQ9H307 717 aaKnown RBP16.05■□□□□ 0.16
CDCA3-212ENST00000604599 ANKRD30AQ9BXX3 1397 aa16.04■□□□□ 0.16
CDCA3-212ENST00000604599 DISP3Q9P2K9 1392 aa16.04■□□□□ 0.16
CDCA3-212ENST00000604599 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
CDCA3-212ENST00000604599 PANK2Q9BZ23 570 aa16.04■□□□□ 0.16
CDCA3-212ENST00000604599 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
CDCA3-212ENST00000604599 IGHDP01880 384 aa16.03■□□□□ 0.16
CDCA3-212ENST00000604599 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDCA3-212ENST00000604599 GZF1Q9H116 711 aaPredicted RBP16.03■□□□□ 0.16
CDCA3-212ENST00000604599 WDR43Q15061 677 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDCA3-212ENST00000604599 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
CDCA3-212ENST00000604599 ADGRL2O95490 1459 aa16.01■□□□□ 0.15
CDCA3-212ENST00000604599 NUP153P49790 1475 aaKnown RBP16.01■□□□□ 0.15
CDCA3-212ENST00000604599 HSP90AA2PQ14568 343 aaPredicted RBP16.01■□□□□ 0.15
CDCA3-212ENST00000604599 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
CDCA3-212ENST00000604599 GOLGA6L3A6NEY3 463 aa16.01■□□□□ 0.15
CDCA3-212ENST00000604599 BCAR3O75815 825 aa16.01■□□□□ 0.15
CDCA3-212ENST00000604599 COL17A1Q9UMD9 1497 aaPredicted RBP16■□□□□ 0.15
CDCA3-212ENST00000604599 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
CDCA3-212ENST00000604599 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
CDCA3-212ENST00000604599 CROCC2H7BZ55 1655 aa15.99■□□□□ 0.15
CDCA3-212ENST00000604599 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
CDCA3-212ENST00000604599 ZNF521Q96K83 1311 aa15.99■□□□□ 0.15
CDCA3-212ENST00000604599 HSP90AA1P07900 732 aaKnown RBP15.99■□□□□ 0.15
CDCA3-212ENST00000604599 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
CDCA3-212ENST00000604599 TRPM1Q7Z4N2 1603 aa15.98■□□□□ 0.15
CDCA3-212ENST00000604599 CLCN1P35523 988 aa15.98■□□□□ 0.15
CDCA3-212ENST00000604599 CCDC146Q8IYE0 955 aa15.98■□□□□ 0.15
CDCA3-212ENST00000604599 TESK2Q96S53 571 aa15.98■□□□□ 0.15
CDCA3-212ENST00000604599 PRAG1Q86YV5 1406 aa15.98■□□□□ 0.15
CDCA3-212ENST00000604599 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
CDCA3-212ENST00000604599 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
CDCA3-212ENST00000604599 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
CDCA3-212ENST00000604599 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
CDCA3-212ENST00000604599 GPATCH8Q9UKJ3 1502 aaKnown RBP15.96■□□□□ 0.15
CDCA3-212ENST00000604599 ITSN2Q9NZM3 1697 aa15.96■□□□□ 0.15
CDCA3-212ENST00000604599 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
CDCA3-212ENST00000604599 TBC1D2Q9BYX2 928 aa15.95■□□□□ 0.14
CDCA3-212ENST00000604599 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
CDCA3-212ENST00000604599 MAPK8IP3Q9UPT6 1336 aa15.94■□□□□ 0.14
CDCA3-212ENST00000604599 RRP9O43818 475 aaKnown RBP15.94■□□□□ 0.14
CDCA3-212ENST00000604599 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
CDCA3-212ENST00000604599 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
CDCA3-212ENST00000604599 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
CDCA3-212ENST00000604599 TMF1P82094 1093 aa15.93■□□□□ 0.14
CDCA3-212ENST00000604599 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
CDCA3-212ENST00000604599 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
CDCA3-212ENST00000604599 COG6Q9Y2V7 657 aa15.92■□□□□ 0.14
CDCA3-212ENST00000604599 MCM4P33991 863 aa15.92■□□□□ 0.14
CDCA3-212ENST00000604599 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
CDCA3-212ENST00000604599 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
CDCA3-212ENST00000604599 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
CDCA3-212ENST00000604599 CANXP27824 592 aaKnown RBP15.91■□□□□ 0.14
CDCA3-212ENST00000604599 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
CDCA3-212ENST00000604599 PBRM1Q86U86 1689 aa15.91■□□□□ 0.14
CDCA3-212ENST00000604599 APAF1O14727 1248 aa15.91■□□□□ 0.14
CDCA3-212ENST00000604599 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
CDCA3-212ENST00000604599 TBC1D32Q96NH3 1257 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms