RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 AFAP1Q8N556 730 aa17.86■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 NUP155O75694 1391 aa17.86■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 DHX29Q7Z478 1369 aaKnown RBP17.86■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 RPRD2Q5VT52 1461 aaKnown RBP17.86■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 REREQ9P2R6 1566 aa17.86■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 MROH1Q8NDA8 1641 aa17.84■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 DIP2CQ9Y2E4 1556 aa17.84■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 FAM69CQ0P6D2 419 aa17.84■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 A2MP01023 1474 aa17.83■□□□□ 0.45
NEDD8-MDP1-203ENST00000604306 ATP10AO60312 1499 aa17.82■□□□□ 0.44
NEDD8-MDP1-203ENST00000604306 ZC3H13Q5T200 1668 aaKnown RBP17.81■□□□□ 0.44
NEDD8-MDP1-203ENST00000604306 LMTK2Q8IWU2 1503 aa17.81■□□□□ 0.44
NEDD8-MDP1-203ENST00000604306 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
NEDD8-MDP1-203ENST00000604306 E9PCH4 1651 aa17.79■□□□□ 0.44
NEDD8-MDP1-203ENST00000604306 SPHKAPQ2M3C7 1700 aa17.78■□□□□ 0.44
NEDD8-MDP1-203ENST00000604306 SIN3AQ96ST3 1273 aa17.76■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 KANK1Q14678 1352 aa17.76■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 PKD2Q13563 968 aa17.75■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 NEURL4Q96JN8 1562 aa17.74■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 EFCAB6Q5THR3 1501 aa17.74■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 ARHGEF40Q8TER5 1519 aa17.74■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 CEP152O94986 1710 aa17.74■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 AGLP35573 1532 aa17.73■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 TRPM2O94759 1503 aa17.72■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 NEUROD1Q13562 356 aa17.71■□□□□ 0.43
NEDD8-MDP1-203ENST00000604306 PTPRTO14522 1441 aa17.68■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 CAMSAP1Q5T5Y3 1602 aa17.68■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 RAPGEF3O95398 923 aa17.67■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 MYT1LQ9UL68 1186 aa17.67■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 PLA2R1Q13018 1463 aa17.66■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 ABCC3O15438 1527 aa17.66■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 ZNF316A6NFI3 1004 aaPredicted RBP17.65■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 KIF3BO15066 747 aa17.65■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 KIF1BO60333 1816 aa17.65■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 YEATS2Q9ULM3 1422 aa17.64■□□□□ 0.42
NEDD8-MDP1-203ENST00000604306 FOXD1Q16676 465 aa17.64■□□□□ 0.41
NEDD8-MDP1-203ENST00000604306 UHRF1BP1Q6BDS2 1440 aa17.63■□□□□ 0.41
NEDD8-MDP1-203ENST00000604306 ARHGAP31Q2M1Z3 1444 aa17.62■□□□□ 0.41
NEDD8-MDP1-203ENST00000604306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.419e-8■■■□□ 14.9
NEDD8-MDP1-203ENST00000604306 CLTCL1P53675 1640 aa17.61■□□□□ 0.41
NEDD8-MDP1-203ENST00000604306 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
NEDD8-MDP1-203ENST00000604306 COL17A1Q9UMD9 1497 aaPredicted RBP17.6■□□□□ 0.41
NEDD8-MDP1-203ENST00000604306 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 CNTLNQ9NXG0 1405 aa17.57■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 POLR1AO95602 1720 aaPredicted RBP17.57■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 PIK3C2BO00750 1634 aa17.57■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 LAMC1P11047 1609 aa17.57■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 IFT172Q9UG01 1749 aa17.56■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 SIGLEC1Q9BZZ2 1709 aa17.55■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 PREX1Q8TCU6 1659 aa17.55■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 NPATQ14207 1427 aa17.54■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 KIAA1210Q9ULL0 1709 aa17.53■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 MROH2AA6NES4 1674 aa17.53■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 NOS1P29475 1434 aa17.52■□□□□ 0.4
NEDD8-MDP1-203ENST00000604306 CLTCQ00610 1675 aaKnown RBP17.5■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 CFAP65Q6ZU64 1925 aaKnown RBP17.5■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 ADGRB3O60242 1522 aa17.5■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 WASHC2CQ9Y4E1 1318 aa17.48■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 MADDQ8WXG6 1647 aa17.48■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 SYNMO15061 1565 aa17.48■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 PPLO60437 1756 aa17.48■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 MYOM2P54296 1465 aa17.47■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 GGT6Q6P531 493 aa17.46■□□□□ 0.39
NEDD8-MDP1-203ENST00000604306 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 KDM5AP29375 1690 aaKnown RBP17.44■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 GPRASP1Q5JY77 1395 aa17.41■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 DIEXFQ68CQ4 756 aaKnown RBP17.41■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 ERVK-7P63135 1459 aa17.41■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 NRXN1Q9ULB1 1477 aa17.4■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
NEDD8-MDP1-203ENST00000604306 MYO5BQ9ULV0 1848 aa17.38■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 TMEM131LA2VDJ0 1609 aa17.38■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 IQGAP1P46940 1657 aa17.38■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 FER1L4A9Z1Z3 1794 aa17.38■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 SLC52A1Q9NWF4 448 aa17.37■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 SETBP1Q9Y6X0 1596 aa17.35■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 NEXMIFQ5QGS0 1516 aa17.33■□□□□ 0.37
NEDD8-MDP1-203ENST00000604306 ZFYVE9O95405 1425 aa17.33■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 USP47Q96K76 1375 aa17.32■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 ARID4BQ4LE39 1312 aaPredicted RBP17.31■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 HSPA5P11021 654 aaKnown RBP17.31■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 C3P01024 1663 aa17.3■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 RGL3Q3MIN7 710 aa17.3■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 MYO3AQ8NEV4 1616 aa17.29■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 KDM2AQ9Y2K7 1162 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms