RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 RBM25P49756 843 aaKnown RBP6.59□□□□□ -1.35
LINC01109-201ENST00000603837 ZBTB7CA1YPR0 619 aa6.58□□□□□ -1.36
LINC01109-201ENST00000603837 CERS3Q8IU89 383 aa6.58□□□□□ -1.36
LINC01109-201ENST00000603837 POTEB2H3BUK9 544 aa6.57□□□□□ -1.36
LINC01109-201ENST00000603837 CCER1Q8TC90 406 aaPredicted RBP6.57□□□□□ -1.36
LINC01109-201ENST00000603837 TMEM121BQ9BXQ6 578 aaPredicted RBP6.57□□□□□ -1.36
LINC01109-201ENST00000603837 RAD21O60216 631 aa6.57□□□□□ -1.36
LINC01109-201ENST00000603837 ZNF326Q5BKZ1 582 aaKnown RBP6.57□□□□□ -1.36
LINC01109-201ENST00000603837 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
LINC01109-201ENST00000603837 ZNF316A6NFI3 1004 aaPredicted RBP6.56□□□□□ -1.36
LINC01109-201ENST00000603837 GLIPR1L2Q4G1C9 344 aa6.56□□□□□ -1.36
LINC01109-201ENST00000603837 C3orf67Q6ZVT6 689 aa6.56□□□□□ -1.36
LINC01109-201ENST00000603837 IL27Q8NEV9 243 aa6.56□□□□□ -1.36
LINC01109-201ENST00000603837 USP35Q9P2H5 1018 aa6.56□□□□□ -1.36
LINC01109-201ENST00000603837 CADPS2Q86UW7 1296 aa6.55□□□□□ -1.36
LINC01109-201ENST00000603837 TICAM2Q86XR7 235 aa6.55□□□□□ -1.36
LINC01109-201ENST00000603837 KCTD17Q8N5Z5 321 aa6.54□□□□□ -1.36
LINC01109-201ENST00000603837 FANCIQ9NVI1 1328 aa6.54□□□□□ -1.36
LINC01109-201ENST00000603837 POTEJP0CG39 1038 aa6.54□□□□□ -1.36
LINC01109-201ENST00000603837 LAMC3Q9Y6N6 1575 aa6.54□□□□□ -1.36
LINC01109-201ENST00000603837 PRDM16Q9HAZ2 1276 aa6.53□□□□□ -1.36
LINC01109-201ENST00000603837 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
LINC01109-201ENST00000603837 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.53□□□□□ -1.36
LINC01109-201ENST00000603837 PPM1GO15355 546 aaPredicted RBP6.52□□□□□ -1.37
LINC01109-201ENST00000603837 BRPF1P55201 1214 aaPredicted RBP6.51□□□□□ -1.37
LINC01109-201ENST00000603837 LHX8Q68G74 356 aa6.51□□□□□ -1.37
LINC01109-201ENST00000603837 MAMSTRQ6ZN01 415 aa6.51□□□□□ -1.37
LINC01109-201ENST00000603837 FAM177A1Q8N128 213 aaPredicted RBP6.51□□□□□ -1.37
LINC01109-201ENST00000603837 SCUBE2Q9NQ36 999 aa6.51□□□□□ -1.37
LINC01109-201ENST00000603837 NAP1L2Q9ULW6 460 aaPredicted RBP6.51□□□□□ -1.37
LINC01109-201ENST00000603837 PDE4AP27815 886 aa6.51□□□□□ -1.37
LINC01109-201ENST00000603837 PSMD1Q99460 953 aa6.51□□□□□ -1.37
LINC01109-201ENST00000603837 ARID4BQ4LE39 1312 aaPredicted RBP6.51□□□□□ -1.37
LINC01109-201ENST00000603837 NCLP19338 710 aaKnown RBP6.51□□□□□ -1.37
LINC01109-201ENST00000603837 TMC2Q8TDI7 906 aa6.51□□□□□ -1.37
LINC01109-201ENST00000603837 NCKAP5LQ9HCH0 1330 aa6.5□□□□□ -1.37
LINC01109-201ENST00000603837 LARP6Q9BRS8 491 aaKnown RBP6.5□□□□□ -1.37
LINC01109-201ENST00000603837 CRISPLD2Q9H0B8 497 aa6.5□□□□□ -1.37
LINC01109-201ENST00000603837 CHMP4BQ9H444 224 aaKnown RBP6.5□□□□□ -1.37
LINC01109-201ENST00000603837 TMEM92Q6UXU6 159 aa6.49□□□□□ -1.37
LINC01109-201ENST00000603837 WWC1Q8IX03 1113 aa6.49□□□□□ -1.37
LINC01109-201ENST00000603837 GPHNQ9NQX3 736 aaPredicted RBP6.49□□□□□ -1.37
LINC01109-201ENST00000603837 PRDM2Q13029 1718 aa6.49□□□□□ -1.37
LINC01109-201ENST00000603837 C2orf72A6NCS6 295 aa6.48□□□□□ -1.37
LINC01109-201ENST00000603837 KDM4AO75164 1064 aa6.48□□□□□ -1.37
LINC01109-201ENST00000603837 RSF1Q96T23 1441 aaPredicted RBP6.48□□□□□ -1.37
LINC01109-201ENST00000603837 WDR70Q9NW82 654 aa6.48□□□□□ -1.37
LINC01109-201ENST00000603837 SECISBP2LQ93073 1101 aaKnown RBP6.48□□□□□ -1.37
LINC01109-201ENST00000603837 FAM43BQ6ZT52 329 aaPredicted RBP6.48□□□□□ -1.37
LINC01109-201ENST00000603837 THOC2Q8NI27 1593 aaKnown RBP6.47□□□□□ -1.37
LINC01109-201ENST00000603837 BAZ1AQ9NRL2 1556 aaPredicted RBP6.47□□□□□ -1.37
LINC01109-201ENST00000603837 SMARCA4P51532 1647 aa6.47□□□□□ -1.37
LINC01109-201ENST00000603837 SLAIN1Q8ND83 568 aa6.47□□□□□ -1.37
LINC01109-201ENST00000603837 DDX27Q96GQ7 796 aaKnown RBP6.47□□□□□ -1.37
LINC01109-201ENST00000603837 KCNG1Q9UIX4 513 aa6.47□□□□□ -1.37
LINC01109-201ENST00000603837 KIF3CO14782 793 aa6.46□□□□□ -1.37
LINC01109-201ENST00000603837 OTUD5Q96G74 571 aa6.46□□□□□ -1.38
LINC01109-201ENST00000603837 FOXK1P85037 733 aa6.45□□□□□ -1.38
LINC01109-201ENST00000603837 DSG2Q14126 1118 aa6.45□□□□□ -1.38
LINC01109-201ENST00000603837 CLSTN1O94985 981 aa6.45□□□□□ -1.38
LINC01109-201ENST00000603837 PPP1R15BQ5SWA1 713 aa6.45□□□□□ -1.38
LINC01109-201ENST00000603837 AEBP1Q8IUX7 1158 aa6.45□□□□□ -1.38
LINC01109-201ENST00000603837 WDR97A6NE52 1622 aa6.44□□□□□ -1.38
LINC01109-201ENST00000603837 MFSD10Q14728 455 aa6.44□□□□□ -1.38
LINC01109-201ENST00000603837 RGS22Q8NE09 1264 aa6.44□□□□□ -1.38
LINC01109-201ENST00000603837 RTL5Q5HYW3 569 aaPredicted RBP6.44□□□□□ -1.38
LINC01109-201ENST00000603837 PLPP6Q8IY26 295 aa6.43□□□□□ -1.38
LINC01109-201ENST00000603837 MROH2BQ7Z745 1585 aa6.42□□□□□ -1.38
LINC01109-201ENST00000603837 APBB1O00213 710 aa6.42□□□□□ -1.38
LINC01109-201ENST00000603837 ATAD2BQ9ULI0 1458 aa6.41□□□□□ -1.38
LINC01109-201ENST00000603837 E2F4Q16254 413 aa6.41□□□□□ -1.38
LINC01109-201ENST00000603837 PLCD4Q9BRC7 762 aa6.4□□□□□ -1.38
LINC01109-201ENST00000603837 ITGAEP38570 1179 aa6.4□□□□□ -1.39
LINC01109-201ENST00000603837 CCDC27Q2M243 656 aa6.4□□□□□ -1.39
LINC01109-201ENST00000603837 WDR62O43379 1518 aa6.4□□□□□ -1.39
LINC01109-201ENST00000603837 TEX2Q8IWB9 1127 aa6.39□□□□□ -1.39
LINC01109-201ENST00000603837 NEUROD2Q15784 382 aa6.39□□□□□ -1.39
LINC01109-201ENST00000603837 NOP58Q9Y2X3 529 aaKnown RBP6.39□□□□□ -1.39
LINC01109-201ENST00000603837 OS9Q13438 667 aaPredicted RBP6.38□□□□□ -1.39
LINC01109-201ENST00000603837 FAM50AQ14320 339 aaKnown RBP6.38□□□□□ -1.39
LINC01109-201ENST00000603837 P3H3Q8IVL6 736 aa6.38□□□□□ -1.39
LINC01109-201ENST00000603837 FAM9BQ8IZU0 186 aa6.38□□□□□ -1.39
LINC01109-201ENST00000603837 CAMK2BQ13554 666 aa6.37□□□□□ -1.39
LINC01109-201ENST00000603837 KCNV2Q8TDN2 545 aa6.37□□□□□ -1.39
LINC01109-201ENST00000603837 WIZO95785 1651 aa6.37□□□□□ -1.39
LINC01109-201ENST00000603837 C11orf95C9JLR9 678 aaPredicted RBP6.37□□□□□ -1.39
LINC01109-201ENST00000603837 SNPHO15079 494 aa6.36□□□□□ -1.39
LINC01109-201ENST00000603837 DOK7Q18PE1 504 aa6.36□□□□□ -1.39
LINC01109-201ENST00000603837 UPF1Q92900 1129 aaKnown RBP eCLIP6.36□□□□□ -1.39
LINC01109-201ENST00000603837 EMILIN3Q9NT22 766 aa6.36□□□□□ -1.39
LINC01109-201ENST00000603837 BAZ1BQ9UIG0 1483 aaKnown RBP6.36□□□□□ -1.39
LINC01109-201ENST00000603837 SLC34A2O95436 690 aa6.35□□□□□ -1.39
LINC01109-201ENST00000603837 HOXB3P14651 431 aaPredicted RBP6.35□□□□□ -1.39
LINC01109-201ENST00000603837 PATL2C9JE40 543 aaKnown RBP6.34□□□□□ -1.39
LINC01109-201ENST00000603837 RIMBP2O15034 1052 aa6.34□□□□□ -1.39
LINC01109-201ENST00000603837 ZNF710Q8N1W2 664 aa6.34□□□□□ -1.39
LINC01109-201ENST00000603837 PDS5BQ9NTI5 1447 aa6.34□□□□□ -1.4
LINC01109-201ENST00000603837 MFAP1P55081 439 aaKnown RBP6.34□□□□□ -1.4
LINC01109-201ENST00000603837 ARHGEF1Q92888 912 aaKnown RBP6.34□□□□□ -1.4
LINC01109-201ENST00000603837 MAP3K9P80192 1104 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms