RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 PLEKHH2Q8IVE3 1493 aa5.2□□□□□ -1.58
VCAM1-205ENST00000603679 CDK12Q9NYV4 1490 aaPredicted RBP5.2□□□□□ -1.58
VCAM1-205ENST00000603679 SCAF1Q9H7N4 1312 aaKnown RBP5.2□□□□□ -1.58
VCAM1-205ENST00000603679 NHSL1Q5SYE7 1610 aa5.19□□□□□ -1.58
VCAM1-205ENST00000603679 PRDM15P57071 1507 aaPredicted RBP5.19□□□□□ -1.58
VCAM1-205ENST00000603679 CHD2O14647 1828 aaKnown RBP5.19□□□□□ -1.58
VCAM1-205ENST00000603679 COL24A1Q17RW2 1714 aa5.19□□□□□ -1.58
VCAM1-205ENST00000603679 TAOK2Q9UL54 1235 aa5.19□□□□□ -1.58
VCAM1-205ENST00000603679 ATP7AQ04656 1500 aa5.19□□□□□ -1.58
VCAM1-205ENST00000603679 EFCAB6Q5THR3 1501 aa5.19□□□□□ -1.58
VCAM1-205ENST00000603679 CAMSAP1Q5T5Y3 1602 aa5.18□□□□□ -1.58
VCAM1-205ENST00000603679 A2ML1A8K2U0 1454 aa5.18□□□□□ -1.58
VCAM1-205ENST00000603679 TRHP20396 242 aaPredicted RBP5.18□□□□□ -1.58
VCAM1-205ENST00000603679 AHDC1Q5TGY3 1603 aaPredicted RBP5.18□□□□□ -1.58
VCAM1-205ENST00000603679 RGPD3A6NKT7 1758 aaPredicted RBP5.18□□□□□ -1.58
VCAM1-205ENST00000603679 RGPD4Q7Z3J3 1758 aa5.18□□□□□ -1.58
VCAM1-205ENST00000603679 TET3O43151 1660 aa5.18□□□□□ -1.58
VCAM1-205ENST00000603679 VSIG10Q8N0Z9 540 aa5.18□□□□□ -1.58
VCAM1-205ENST00000603679 GCC2Q8IWJ2 1684 aa5.17□□□□□ -1.58
VCAM1-205ENST00000603679 ERICH6Q7L0X2 663 aa5.17□□□□□ -1.58
VCAM1-205ENST00000603679 GPATCH8Q9UKJ3 1502 aaKnown RBP5.17□□□□□ -1.58
VCAM1-205ENST00000603679 FYCO1Q9BQS8 1478 aa5.17□□□□□ -1.58
VCAM1-205ENST00000603679 TRAPPC8Q9Y2L5 1435 aa5.16□□□□□ -1.58
VCAM1-205ENST00000603679 NLRP1Q9C000 1473 aa5.16□□□□□ -1.58
VCAM1-205ENST00000603679 ARXQ96QS3 562 aa5.16□□□□□ -1.58
VCAM1-205ENST00000603679 PTPRKQ15262 1439 aa5.16□□□□□ -1.58
VCAM1-205ENST00000603679 PZPP20742 1482 aa5.16□□□□□ -1.58
VCAM1-205ENST00000603679 SOCS7O14512 581 aa5.16□□□□□ -1.58
VCAM1-205ENST00000603679 NCOA3Q9Y6Q9 1424 aa5.15□□□□□ -1.58
VCAM1-205ENST00000603679 LRRC9Q6ZRR7 1453 aa5.15□□□□□ -1.58
VCAM1-205ENST00000603679 ARHGAP31Q2M1Z3 1444 aa5.15□□□□□ -1.59
VCAM1-205ENST00000603679 TIAM1Q13009 1591 aa5.14□□□□□ -1.59
VCAM1-205ENST00000603679 XRN1Q8IZH2 1706 aaKnown RBP5.14□□□□□ -1.59
VCAM1-205ENST00000603679 COL16A1Q07092 1604 aaPredicted RBP5.13□□□□□ -1.59
VCAM1-205ENST00000603679 SHANK2Q9UPX8 1470 aa5.13□□□□□ -1.59
VCAM1-205ENST00000603679 PRKCSHP14314 528 aaPredicted RBP5.13□□□□□ -1.59
VCAM1-205ENST00000603679 TROQ12816 1431 aaPredicted RBP5.13□□□□□ -1.59
VCAM1-205ENST00000603679 CEP152O94986 1710 aa5.13□□□□□ -1.59
VCAM1-205ENST00000603679 HAP1P54257 671 aaPredicted RBP5.13□□□□□ -1.59
VCAM1-205ENST00000603679 CASKIN1Q8WXD9 1431 aa5.12□□□□□ -1.59
VCAM1-205ENST00000603679 KNDC1Q76NI1 1749 aa5.12□□□□□ -1.59
VCAM1-205ENST00000603679 UNC13BO14795 1591 aa5.12□□□□□ -1.59
VCAM1-205ENST00000603679 FGD6Q6ZV73 1430 aa5.12□□□□□ -1.59
VCAM1-205ENST00000603679 NPM1P06748 294 aaKnown RBP eCLIP5.12□□□□□ -1.59
VCAM1-205ENST00000603679 UHRF1BP1Q6BDS2 1440 aa5.11□□□□□ -1.59
VCAM1-205ENST00000603679 NKTRP30414 1462 aaKnown RBP5.11□□□□□ -1.59
VCAM1-205ENST00000603679 EHBP1L1Q8N3D4 1523 aa5.11□□□□□ -1.59
VCAM1-205ENST00000603679 FMN1Q68DA7 1419 aa5.1□□□□□ -1.59
VCAM1-205ENST00000603679 CRYBG1Q9Y4K1 1723 aa5.1□□□□□ -1.59
VCAM1-205ENST00000603679 MBD5Q9P267 1494 aa5.1□□□□□ -1.59
VCAM1-205ENST00000603679 DMRT2Q9Y5R5 561 aa5.09□□□□□ -1.6
VCAM1-205ENST00000603679 IFT172Q9UG01 1749 aa5.08□□□□□ -1.6
VCAM1-205ENST00000603679 CERKQ8TCT0 537 aa5.08□□□□□ -1.6
VCAM1-205ENST00000603679 ARHGAP35Q9NRY4 1499 aa5.08□□□□□ -1.6
VCAM1-205ENST00000603679 QSER1Q2KHR3 1735 aa5.08□□□□□ -1.6
VCAM1-205ENST00000603679 ABCA3Q99758 1704 aa5.07□□□□□ -1.6
VCAM1-205ENST00000603679 RNF216Q9NWF9 866 aaPredicted RBP5.07□□□□□ -1.6
VCAM1-205ENST00000603679 NALCNQ8IZF0 1738 aa5.07□□□□□ -1.6
VCAM1-205ENST00000603679 NRXN3Q9Y4C0 1643 aa5.06□□□□□ -1.6
VCAM1-205ENST00000603679 TPRNQ4KMQ1 711 aa5.06□□□□□ -1.6
VCAM1-205ENST00000603679 NWD2Q9ULI1 1742 aa5.06□□□□□ -1.6
VCAM1-205ENST00000603679 LRRC7Q96NW7 1537 aa5.06□□□□□ -1.6
VCAM1-205ENST00000603679 CEP162Q5TB80 1403 aa5.05□□□□□ -1.6
VCAM1-205ENST00000603679 RREB1Q92766 1687 aa5.05□□□□□ -1.6
VCAM1-205ENST00000603679 ADGRB3O60242 1522 aa5.05□□□□□ -1.6
VCAM1-205ENST00000603679 SYCP2Q9BX26 1530 aa5.05□□□□□ -1.6
VCAM1-205ENST00000603679 MYCNP04198 464 aaPredicted RBP5.05□□□□□ -1.6
VCAM1-205ENST00000603679 SETBP1Q9Y6X0 1596 aa5.05□□□□□ -1.6
VCAM1-205ENST00000603679 RPRD2Q5VT52 1461 aaKnown RBP5.05□□□□□ -1.6
VCAM1-205ENST00000603679 TMEM131LA2VDJ0 1609 aa5.05□□□□□ -1.6
VCAM1-205ENST00000603679 ROBO1Q9Y6N7 1651 aa5.04□□□□□ -1.6
VCAM1-205ENST00000603679 USP54Q70EL1 1684 aa5.04□□□□□ -1.6
VCAM1-205ENST00000603679 PKD2Q13563 968 aa5.04□□□□□ -1.6
VCAM1-205ENST00000603679 WNK3Q9BYP7 1800 aa5.04□□□□□ -1.6
VCAM1-205ENST00000603679 PHLPP1O60346 1717 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 ADGRL2O95490 1459 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 FBLN2P98095 1184 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 FBXO3Q9UK99 471 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 FAM135BQ49AJ0 1406 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 NEXMIFQ5QGS0 1516 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 A2MP01023 1474 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 DCCP43146 1447 aa5.03□□□□□ -1.6
VCAM1-205ENST00000603679 DUOX2Q9NRD8 1548 aa5.01□□□□□ -1.61
VCAM1-205ENST00000603679 MYO5BQ9ULV0 1848 aa5.01□□□□□ -1.61
VCAM1-205ENST00000603679 NRAPQ86VF7 1730 aa5.01□□□□□ -1.61
VCAM1-205ENST00000603679 ERVK-7P63135 1459 aa5.01□□□□□ -1.61
VCAM1-205ENST00000603679 CLIP1P30622 1438 aa5.01□□□□□ -1.61
VCAM1-205ENST00000603679 ARHGAP5Q13017 1502 aa5.01□□□□□ -1.61
VCAM1-205ENST00000603679 LRP6O75581 1613 aa5.01□□□□□ -1.61
VCAM1-205ENST00000603679 ERBINQ96RT1 1412 aa5□□□□□ -1.61
VCAM1-205ENST00000603679 SCAPERQ9BY12 1400 aa5□□□□□ -1.61
VCAM1-205ENST00000603679 SIPA1L2Q9P2F8 1722 aaPredicted RBP5□□□□□ -1.61
VCAM1-205ENST00000603679 TNS1Q9HBL0 1735 aaKnown RBP4.99□□□□□ -1.61
VCAM1-205ENST00000603679 RGPD1P0DJD0 1748 aa4.99□□□□□ -1.61
VCAM1-205ENST00000603679 KIF1AQ12756 1690 aa4.99□□□□□ -1.61
VCAM1-205ENST00000603679 TIMELESSQ9UNS1 1208 aa4.98□□□□□ -1.61
VCAM1-205ENST00000603679 NOS1P29475 1434 aa4.98□□□□□ -1.61
VCAM1-205ENST00000603679 HOMEZQ8IX15 550 aa4.98□□□□□ -1.61
VCAM1-205ENST00000603679 MST1RQ04912 1400 aa4.98□□□□□ -1.61
VCAM1-205ENST00000603679 TRPM1Q7Z4N2 1603 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms