RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 BMS1Q14692 1282 aaKnown RBP4.17□□□□□ -1.74
NEB-218ENST00000603639 SALL2Q9Y467 1007 aaPredicted RBP4.17□□□□□ -1.74
NEB-218ENST00000603639 ERICH3Q5RHP9 1530 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 HSP90AB1P08238 724 aaKnown RBP4.17□□□□□ -1.74
NEB-218ENST00000603639 GOLGA2Q08379 1002 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 ACBD3Q9H3P7 528 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 KIF3AQ9Y496 699 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 DCTN1Q14203 1278 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 STK31Q9BXU1 1019 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 SSR1P43307 286 aaKnown RBP4.17□□□□□ -1.74
NEB-218ENST00000603639 HS1BP3Q53T59 392 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 FTSJ3Q8IY81 847 aaKnown RBP4.17□□□□□ -1.74
NEB-218ENST00000603639 DDX11Q96FC9 970 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 HSP90B2PQ58FF3 399 aa4.17□□□□□ -1.74
NEB-218ENST00000603639 ARGLU1Q9NWB6 273 aaPredicted RBP4.17□□□□□ -1.74
NEB-218ENST00000603639 PRPF40AO75400 957 aaKnown RBP4.16□□□□□ -1.74
NEB-218ENST00000603639 CENPQQ7L2Z9 268 aaPredicted RBP4.16□□□□□ -1.74
NEB-218ENST00000603639 RPAINQ86UA6 219 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 MCM3P25205 808 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 GZF1Q9H116 711 aaPredicted RBP4.16□□□□□ -1.74
NEB-218ENST00000603639 CUX1P39880 1505 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 TOP2AP11388 1531 aaKnown RBP4.16□□□□□ -1.74
NEB-218ENST00000603639 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.16□□□□□ -1.74
NEB-218ENST00000603639 EFCAB5A4FU69 1503 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 CCDC18Q5T9S5 1454 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 CALCOCO1Q9P1Z2 691 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 HSCBQ8IWL3 235 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 HMGXB3Q12766 1538 aa4.16□□□□□ -1.74
NEB-218ENST00000603639 THOC2Q8NI27 1593 aaKnown RBP4.16□□□□□ -1.74
NEB-218ENST00000603639 ZRSR2Q15696 482 aaKnown RBP4.15□□□□□ -1.74
NEB-218ENST00000603639 SHTN1A0MZ66 631 aa4.15□□□□□ -1.74
NEB-218ENST00000603639 B4GALNT3Q6L9W6 998 aa4.15□□□□□ -1.74
NEB-218ENST00000603639 FAM161AQ3B820 660 aa4.15□□□□□ -1.74
NEB-218ENST00000603639 NEXNQ0ZGT2 675 aa4.15□□□□□ -1.74
NEB-218ENST00000603639 RNF20Q5VTR2 975 aa4.15□□□□□ -1.74
NEB-218ENST00000603639 PRDM2Q13029 1718 aa4.15□□□□□ -1.74
NEB-218ENST00000603639 ERLIN2O94905 339 aa4.15□□□□□ -1.74
NEB-218ENST00000603639 CCDC50Q8IVM0 306 aa4.15□□□□□ -1.75
NEB-218ENST00000603639 DDX49Q9Y6V7 483 aaKnown RBP4.15□□□□□ -1.75
NEB-218ENST00000603639 KIF21BO75037 1637 aa4.15□□□□□ -1.75
NEB-218ENST00000603639 CWC27Q6UX04 472 aaKnown RBP4.15□□□□□ -1.75
NEB-218ENST00000603639 KTN1Q86UP2 1357 aaKnown RBP4.15□□□□□ -1.75
NEB-218ENST00000603639 CAVIN2O95810 425 aa4.15□□□□□ -1.75
NEB-218ENST00000603639 PAXIP1Q6ZW49 1069 aaPredicted RBP4.15□□□□□ -1.75
NEB-218ENST00000603639 GTF2A1P52655 376 aaPredicted RBP4.14□□□□□ -1.75
NEB-218ENST00000603639 OGFRQ9NZT2 677 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 SASS6Q6UVJ0 657 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 WRNQ14191 1432 aaPredicted RBP eCLIP4.14□□□□□ -1.75
NEB-218ENST00000603639 ST18O60284 1047 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 LMOD3Q0VAK6 560 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 AEBP1Q8IUX7 1158 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 CCDC83Q8IWF9 413 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.14□□□□□ -1.75
NEB-218ENST00000603639 MICALCLQ6ZW33 695 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 TMX4Q9H1E5 349 aaPredicted RBP4.14□□□□□ -1.75
NEB-218ENST00000603639 NOC3LQ8WTT2 800 aaKnown RBP4.14□□□□□ -1.75
NEB-218ENST00000603639 RABEP1Q15276 862 aa4.14□□□□□ -1.75
NEB-218ENST00000603639 CLIP1P30622 1438 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 SLKQ9H2G2 1235 aaPredicted RBP4.13□□□□□ -1.75
NEB-218ENST00000603639 SMTNL1A8MU46 457 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 LRRFIP1Q32MZ4 808 aaKnown RBP4.13□□□□□ -1.75
NEB-218ENST00000603639 MAP3K1Q13233 1512 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 TIGD1Q96MW7 591 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 NEMFO60524 1076 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 RUFY2Q8WXA3 655 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 PHLDB1Q86UU1 1377 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 PEG3Q9GZU2 1588 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 HOMER1Q86YM7 354 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 SLC26A8Q96RN1 970 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 KDM2AQ9Y2K7 1162 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 SMC4Q9NTJ3 1288 aa4.13□□□□□ -1.75
NEB-218ENST00000603639 CCDC91Q7Z6B0 441 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 HIRIP3Q9BW71 556 aaPredicted RBP4.12□□□□□ -1.75
NEB-218ENST00000603639 TTLL5Q6EMB2 1281 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 PPM1EQ8WY54 764 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 B4GALNT4Q76KP1 1039 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 CFAP45Q9UL16 551 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.12□□□□□ -1.75
NEB-218ENST00000603639 DYNC1I1O14576 645 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 BECN2A8MW95 431 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 PRIMPOLQ96LW4 560 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 SF3A1Q15459 793 aaKnown RBP4.12□□□□□ -1.75
NEB-218ENST00000603639 DHX16O60231 1041 aaKnown RBP4.12□□□□□ -1.75
NEB-218ENST00000603639 FGD1P98174 961 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 PATL2C9JE40 543 aaKnown RBP4.12□□□□□ -1.75
NEB-218ENST00000603639 KIF2AO00139 706 aaPredicted RBP4.12□□□□□ -1.75
NEB-218ENST00000603639 ESPNB1AK53 854 aa4.12□□□□□ -1.75
NEB-218ENST00000603639 KIF20AO95235 890 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 FMN1Q68DA7 1419 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 KIAA1328Q86T90 577 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 FAM184AQ8NB25 1140 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 DNAJC21Q5F1R6 531 aaKnown RBP4.11□□□□□ -1.75
NEB-218ENST00000603639 SPC24Q8NBT2 197 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 UBXN4Q92575 508 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 CEP89Q96ST8 783 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 SDF4Q9BRK5 362 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 CUL7Q14999 1698 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 TMCO5BA8MYB1 307 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 NFKBIBQ15653 356 aa4.11□□□□□ -1.75
NEB-218ENST00000603639 PDE3AQ14432 1141 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms