RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 RTEL1-TNFRSF6BF6WH68 1400 aa16.14■□□□□ 0.17
SCNM1-207ENST00000602841 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
SCNM1-207ENST00000602841 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
SCNM1-207ENST00000602841 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
SCNM1-207ENST00000602841 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
SCNM1-207ENST00000602841 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
SCNM1-207ENST00000602841 KDM5CP41229 1560 aa16.11■□□□□ 0.17
SCNM1-207ENST00000602841 CFAP74Q9C0B2 1584 aa16.11■□□□□ 0.17
SCNM1-207ENST00000602841 GCC2Q8IWJ2 1684 aa16.11■□□□□ 0.17
SCNM1-207ENST00000602841 ATP10AO60312 1499 aa16.1■□□□□ 0.17
SCNM1-207ENST00000602841 SETD1BQ9UPS6 1966 aaKnown RBP16.1■□□□□ 0.17
SCNM1-207ENST00000602841 ADGBQ8N7X0 1667 aa16.09■□□□□ 0.17
SCNM1-207ENST00000602841 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
SCNM1-207ENST00000602841 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
SCNM1-207ENST00000602841 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
SCNM1-207ENST00000602841 SPAG9O60271 1321 aaKnown RBP16.07■□□□□ 0.16
SCNM1-207ENST00000602841 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
SCNM1-207ENST00000602841 ZNF518AQ6AHZ1 1483 aa16.07■□□□□ 0.16
SCNM1-207ENST00000602841 NCKAP5LQ9HCH0 1330 aa16.06■□□□□ 0.16
SCNM1-207ENST00000602841 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
SCNM1-207ENST00000602841 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
SCNM1-207ENST00000602841 ANKRD50Q9ULJ7 1429 aa16.05■□□□□ 0.16
SCNM1-207ENST00000602841 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
SCNM1-207ENST00000602841 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
SCNM1-207ENST00000602841 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
SCNM1-207ENST00000602841 RGS17Q9UGC6 210 aaPredicted RBP16.01■□□□□ 0.15
SCNM1-207ENST00000602841 DHX29Q7Z478 1369 aaKnown RBP16■□□□□ 0.15
SCNM1-207ENST00000602841 CAMSAP1Q5T5Y3 1602 aa16■□□□□ 0.15
SCNM1-207ENST00000602841 PZPP20742 1482 aa15.99■□□□□ 0.15
SCNM1-207ENST00000602841 TOM1O60784 492 aa15.98■□□□□ 0.15
SCNM1-207ENST00000602841 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
SCNM1-207ENST00000602841 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
SCNM1-207ENST00000602841 C3P01024 1663 aa15.98■□□□□ 0.15
SCNM1-207ENST00000602841 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
SCNM1-207ENST00000602841 ABCA6Q8N139 1617 aa15.97■□□□□ 0.15
SCNM1-207ENST00000602841 DIP2CQ9Y2E4 1556 aa15.96■□□□□ 0.14
SCNM1-207ENST00000602841 CCER1Q8TC90 406 aaPredicted RBP15.95■□□□□ 0.14
SCNM1-207ENST00000602841 MPHOSPH9Q99550 1183 aa15.95■□□□□ 0.14
SCNM1-207ENST00000602841 PKD2Q13563 968 aa15.94■□□□□ 0.14
SCNM1-207ENST00000602841 A2MP01023 1474 aa15.94■□□□□ 0.14
SCNM1-207ENST00000602841 UNC13BO14795 1591 aa15.93■□□□□ 0.14
SCNM1-207ENST00000602841 CLSPNQ9HAW4 1339 aa15.93■□□□□ 0.14
SCNM1-207ENST00000602841 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
SCNM1-207ENST00000602841 MROH1Q8NDA8 1641 aa15.92■□□□□ 0.14
SCNM1-207ENST00000602841 VWDEQ8N2E2 1590 aa15.92■□□□□ 0.14
SCNM1-207ENST00000602841 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
SCNM1-207ENST00000602841 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
SCNM1-207ENST00000602841 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
SCNM1-207ENST00000602841 DEPDC5O75140 1603 aa15.9■□□□□ 0.14
SCNM1-207ENST00000602841 NUP155O75694 1391 aa15.89■□□□□ 0.13
SCNM1-207ENST00000602841 EIF2AK4Q9P2K8 1649 aaKnown RBP15.88■□□□□ 0.13
SCNM1-207ENST00000602841 PLA2R1Q13018 1463 aa15.88■□□□□ 0.13
SCNM1-207ENST00000602841 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
SCNM1-207ENST00000602841 REREQ9P2R6 1566 aa15.87■□□□□ 0.13
SCNM1-207ENST00000602841 NPATQ14207 1427 aa15.87■□□□□ 0.13
SCNM1-207ENST00000602841 KIF3BO15066 747 aa15.87■□□□□ 0.13
SCNM1-207ENST00000602841 FOXD1Q16676 465 aa15.87■□□□□ 0.13
SCNM1-207ENST00000602841 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
SCNM1-207ENST00000602841 POTEAQ6S8J7 498 aa15.86■□□□□ 0.13
SCNM1-207ENST00000602841 ALKQ9UM73 1620 aa15.86■□□□□ 0.13
SCNM1-207ENST00000602841 AGLP35573 1532 aa15.85■□□□□ 0.13
SCNM1-207ENST00000602841 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
SCNM1-207ENST00000602841 SLC4A1APQ9BWU0 796 aaKnown RBP15.85■□□□□ 0.13
SCNM1-207ENST00000602841 IQGAP3Q86VI3 1631 aa15.85■□□□□ 0.13
SCNM1-207ENST00000602841 RNF17Q9BXT8 1623 aaKnown RBP15.85■□□□□ 0.13
SCNM1-207ENST00000602841 PRDM15P57071 1507 aaPredicted RBP15.84■□□□□ 0.13
SCNM1-207ENST00000602841 MYT1LQ9UL68 1186 aa15.84■□□□□ 0.13
SCNM1-207ENST00000602841 CNTLNQ9NXG0 1405 aa15.84■□□□□ 0.13
SCNM1-207ENST00000602841 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
SCNM1-207ENST00000602841 LMTK2Q8IWU2 1503 aa15.82■□□□□ 0.12
SCNM1-207ENST00000602841 CPS1P31327 1500 aa15.81■□□□□ 0.12
SCNM1-207ENST00000602841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCNM1-207ENST00000602841 SRCAPQ6ZRS2 3230 aa15.8■□□□□ 0.12
SCNM1-207ENST00000602841 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
SCNM1-207ENST00000602841 GGT6Q6P531 493 aa15.76■□□□□ 0.11
SCNM1-207ENST00000602841 ABCC3O15438 1527 aa15.75■□□□□ 0.11
SCNM1-207ENST00000602841 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
SCNM1-207ENST00000602841 E9PCH4 1651 aa15.73■□□□□ 0.11
SCNM1-207ENST00000602841 TET3O43151 1660 aa15.73■□□□□ 0.11
SCNM1-207ENST00000602841 ZNF142P52746 1687 aaPredicted RBP15.73■□□□□ 0.11
SCNM1-207ENST00000602841 RPRD2Q5VT52 1461 aaKnown RBP15.73■□□□□ 0.11
SCNM1-207ENST00000602841 MYO3AQ8NEV4 1616 aa15.72■□□□□ 0.11
SCNM1-207ENST00000602841 ARHGAP31Q2M1Z3 1444 aa15.71■□□□□ 0.11
SCNM1-207ENST00000602841 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
SCNM1-207ENST00000602841 TIMELESSQ9UNS1 1208 aa15.71■□□□□ 0.11
SCNM1-207ENST00000602841 EFCAB6Q5THR3 1501 aa15.71■□□□□ 0.11
SCNM1-207ENST00000602841 KANK1Q14678 1352 aa15.71■□□□□ 0.11
SCNM1-207ENST00000602841 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
SCNM1-207ENST00000602841 UPF1Q92900 1129 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCNM1-207ENST00000602841 CEP152O94986 1710 aa15.68■□□□□ 0.1
SCNM1-207ENST00000602841 NEURL4Q96JN8 1562 aa15.68■□□□□ 0.1
SCNM1-207ENST00000602841 NOS1P29475 1434 aa15.68■□□□□ 0.1
SCNM1-207ENST00000602841 WASHC2CQ9Y4E1 1318 aa15.68■□□□□ 0.1
SCNM1-207ENST00000602841 PPP1R15AO75807 674 aaPredicted RBP15.67■□□□□ 0.1
SCNM1-207ENST00000602841 SETD1AO15047 1707 aaKnown RBP15.65■□□□□ 0.1
SCNM1-207ENST00000602841 A2ML1A8K2U0 1454 aa15.65■□□□□ 0.1
SCNM1-207ENST00000602841 TRPM2O94759 1503 aa15.65■□□□□ 0.1
SCNM1-207ENST00000602841 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
SCNM1-207ENST00000602841 ZC3H13Q5T200 1668 aaKnown RBP15.63■□□□□ 0.09
SCNM1-207ENST00000602841 LRRC7Q96NW7 1537 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms