RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ZNF142P52746 1687 aaPredicted RBP33.37■■■□□ 2.93
PPFIA3-209ENST00000602783 PKD2Q13563 968 aa33.37■■■□□ 2.93
PPFIA3-209ENST00000602783 MYOM3Q5VTT5 1437 aa33.35■■■□□ 2.93
PPFIA3-209ENST00000602783 PLA2R1Q13018 1463 aa33.34■■■□□ 2.93
PPFIA3-209ENST00000602783 MIA2Q96PC5 1412 aa33.34■■■□□ 2.93
PPFIA3-209ENST00000602783 KDM5DQ9BY66 1539 aa33.33■■■□□ 2.93
PPFIA3-209ENST00000602783 LTBP4Q8N2S1 1624 aa33.33■■■□□ 2.93
PPFIA3-209ENST00000602783 APLP2Q06481 763 aa33.33■■■□□ 2.93
PPFIA3-209ENST00000602783 TNRQ92752 1358 aa33.31■■■□□ 2.92
PPFIA3-209ENST00000602783 A2ML1A8K2U0 1454 aa33.31■■■□□ 2.92
PPFIA3-209ENST00000602783 FAM135AQ9P2D6 1515 aa33.3■■■□□ 2.92
PPFIA3-209ENST00000602783 PZPP20742 1482 aa33.29■■■□□ 2.92
PPFIA3-209ENST00000602783 TCOF1Q13428 1488 aaKnown RBP33.28■■■□□ 2.92
PPFIA3-209ENST00000602783 MAST1Q9Y2H9 1570 aa33.28■■■□□ 2.92
PPFIA3-209ENST00000602783 ZNF335Q9H4Z2 1342 aaPredicted RBP33.26■■■□□ 2.91
PPFIA3-209ENST00000602783 DNMT1P26358 1616 aaKnown RBP33.25■■■□□ 2.91
PPFIA3-209ENST00000602783 IQSEC2Q5JU85 1478 aa33.18■■■□□ 2.9
PPFIA3-209ENST00000602783 RNF17Q9BXT8 1623 aaKnown RBP33.17■■■□□ 2.9
PPFIA3-209ENST00000602783 THEMISQ8N1K5 641 aaPredicted RBP33.14■■■□□ 2.9
PPFIA3-209ENST00000602783 ABCC3O15438 1527 aa33.13■■■□□ 2.89
PPFIA3-209ENST00000602783 EIF2AK4Q9P2K8 1649 aaKnown RBP33.13■■■□□ 2.89
PPFIA3-209ENST00000602783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.12■■■□□ 2.89
PPFIA3-209ENST00000602783 RRP7BPQ9NSQ0 103 aa33.12■■■□□ 2.89
PPFIA3-209ENST00000602783 CROCC2H7BZ55 1655 aa33.12■■■□□ 2.89
PPFIA3-209ENST00000602783 PTPN23Q9H3S7 1636 aa33.12■■■□□ 2.89
PPFIA3-209ENST00000602783 DUOX2Q9NRD8 1548 aa33.12■■■□□ 2.89
PPFIA3-209ENST00000602783 NLRP1Q9C000 1473 aa33.12■■■□□ 2.89
PPFIA3-209ENST00000602783 ABCC5O15440 1437 aa33.11■■■□□ 2.89
PPFIA3-209ENST00000602783 ANKLE2Q86XL3 938 aa33.11■■■□□ 2.89
PPFIA3-209ENST00000602783 KIF15Q9NS87 1388 aa33.09■■■□□ 2.89
PPFIA3-209ENST00000602783 ZC3H13Q5T200 1668 aaKnown RBP33.07■■■□□ 2.89
PPFIA3-209ENST00000602783 UGGT1Q9NYU2 1555 aa33.07■■■□□ 2.88
PPFIA3-209ENST00000602783 MROH1Q8NDA8 1641 aa33.06■■■□□ 2.88
PPFIA3-209ENST00000602783 FGD6Q6ZV73 1430 aa33.06■■■□□ 2.88
PPFIA3-209ENST00000602783 SHANK2Q9UPX8 1470 aa33.05■■■□□ 2.88
PPFIA3-209ENST00000602783 DAPK1P53355 1430 aa33.04■■■□□ 2.88
PPFIA3-209ENST00000602783 UBAP1LF5GYI3 381 aa33.04■■■□□ 2.88
PPFIA3-209ENST00000602783 POLR1AO95602 1720 aaPredicted RBP33.04■■■□□ 2.88
PPFIA3-209ENST00000602783 NEURL4Q96JN8 1562 aa33.04■■■□□ 2.88
PPFIA3-209ENST00000602783 SPATA31D1Q6ZQQ2 1576 aa33.02■■■□□ 2.88
PPFIA3-209ENST00000602783 ERVK-7P63135 1459 aa33.02■■■□□ 2.88
PPFIA3-209ENST00000602783 CHIC2Q9UKJ5 165 aa33.02■■■□□ 2.88
PPFIA3-209ENST00000602783 CEP152O94986 1710 aa33■■■□□ 2.87
PPFIA3-209ENST00000602783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33■■■□□ 2.87
PPFIA3-209ENST00000602783 ERBINQ96RT1 1412 aa33■■■□□ 2.87
PPFIA3-209ENST00000602783 CFAP65Q6ZU64 1925 aaKnown RBP33■■■□□ 2.87
PPFIA3-209ENST00000602783 NPHP4O75161 1426 aaPredicted RBP32.95■■■□□ 2.87
PPFIA3-209ENST00000602783 ANKRD30AQ9BXX3 1397 aa32.94■■■□□ 2.86
PPFIA3-209ENST00000602783 DISP3Q9P2K9 1392 aa32.94■■■□□ 2.86
PPFIA3-209ENST00000602783 MED14O60244 1454 aa32.93■■■□□ 2.86
PPFIA3-209ENST00000602783 PRDM15P57071 1507 aaPredicted RBP32.92■■■□□ 2.86
PPFIA3-209ENST00000602783 ARHGAP31Q2M1Z3 1444 aa32.91■■■□□ 2.86
PPFIA3-209ENST00000602783 DEPDC5O75140 1603 aa32.91■■■□□ 2.86
PPFIA3-209ENST00000602783 KANK1Q14678 1352 aa32.9■■■□□ 2.86
PPFIA3-209ENST00000602783 CPS1P31327 1500 aa32.89■■■□□ 2.86
PPFIA3-209ENST00000602783 FAM50AQ14320 339 aaKnown RBP32.89■■■□□ 2.86
PPFIA3-209ENST00000602783 VWDEQ8N2E2 1590 aa32.85■■■□□ 2.85
PPFIA3-209ENST00000602783 IQGAP1P46940 1657 aa32.82■■■□□ 2.84
PPFIA3-209ENST00000602783 UBR1Q8IWV7 1749 aa32.82■■■□□ 2.84
PPFIA3-209ENST00000602783 TOM1O60784 492 aa32.81■■■□□ 2.84
PPFIA3-209ENST00000602783 SCAF1Q9H7N4 1312 aaKnown RBP32.8■■■□□ 2.84
PPFIA3-209ENST00000602783 PIP4K2BP78356 416 aa32.79■■■□□ 2.84
PPFIA3-209ENST00000602783 TXNDC2Q86VQ3 553 aa32.79■■■□□ 2.84
PPFIA3-209ENST00000602783 LTKP29376 864 aa32.78■■■□□ 2.84
PPFIA3-209ENST00000602783 ADGRL2O95490 1459 aa32.76■■■□□ 2.84
PPFIA3-209ENST00000602783 ILDR2Q71H61 639 aa32.76■■■□□ 2.83
PPFIA3-209ENST00000602783 STAG3Q9UJ98 1225 aa32.76■■■□□ 2.83
PPFIA3-209ENST00000602783 SCAF11Q99590 1463 aaKnown RBP32.75■■■□□ 2.83
PPFIA3-209ENST00000602783 LMTK2Q8IWU2 1503 aa32.75■■■□□ 2.83
PPFIA3-209ENST00000602783 EID1Q9Y6B2 187 aa32.74■■■□□ 2.83
PPFIA3-209ENST00000602783 ARHGAP23Q9P227 1491 aa32.74■■■□□ 2.83
PPFIA3-209ENST00000602783 SLIT1O75093 1534 aa32.72■■■□□ 2.83
PPFIA3-209ENST00000602783 IDI1Q13907 227 aa32.72■■■□□ 2.83
PPFIA3-209ENST00000602783 PIK3C2BO00750 1634 aa32.69■■■□□ 2.82
PPFIA3-209ENST00000602783 ANKRD50Q9ULJ7 1429 aa32.68■■■□□ 2.82
PPFIA3-209ENST00000602783 HSPA1LP34931 641 aa32.68■■■□□ 2.82
PPFIA3-209ENST00000602783 STRCP1A6NGW2 1772 aa32.67■■■□□ 2.82
PPFIA3-209ENST00000602783 TMEM2Q9UHN6 1383 aa32.67■■■□□ 2.82
PPFIA3-209ENST00000602783 LRRC7Q96NW7 1537 aa32.65■■■□□ 2.82
PPFIA3-209ENST00000602783 EFCAB6Q5THR3 1501 aa32.63■■■□□ 2.81
PPFIA3-209ENST00000602783 NOS1P29475 1434 aa32.63■■■□□ 2.81
PPFIA3-209ENST00000602783 SYNMO15061 1565 aa32.61■■■□□ 2.81
PPFIA3-209ENST00000602783 SLC52A1Q9NWF4 448 aa32.6■■■□□ 2.81
PPFIA3-209ENST00000602783 ALKQ9UM73 1620 aa32.56■■■□□ 2.8
PPFIA3-209ENST00000602783 PPARGC1BQ86YN6 1023 aaKnown RBP32.56■■■□□ 2.8
PPFIA3-209ENST00000602783 KDM5AP29375 1690 aaKnown RBP32.56■■■□□ 2.8
PPFIA3-209ENST00000602783 RPRD2Q5VT52 1461 aaKnown RBP32.53■■■□□ 2.8
PPFIA3-209ENST00000602783 SOCS7O14512 581 aa32.52■■■□□ 2.8
PPFIA3-209ENST00000602783 ITGAEP38570 1179 aa32.51■■■□□ 2.79
PPFIA3-209ENST00000602783 SLC26A8Q96RN1 970 aa32.51■■■□□ 2.79
PPFIA3-209ENST00000602783 ADGRB3O60242 1522 aa32.5■■■□□ 2.79
PPFIA3-209ENST00000602783 ROCK1Q13464 1354 aa32.49■■■□□ 2.79
PPFIA3-209ENST00000602783 SENP3Q9H4L4 574 aaPredicted RBP32.49■■■□□ 2.79
PPFIA3-209ENST00000602783 TET3O43151 1660 aa32.47■■■□□ 2.79
PPFIA3-209ENST00000602783 BCANQ96GW7 911 aa32.47■■■□□ 2.79
PPFIA3-209ENST00000602783 KCNA6P17658 529 aa32.46■■■□□ 2.79
PPFIA3-209ENST00000602783 UNC13BO14795 1591 aa32.45■■■□□ 2.79
PPFIA3-209ENST00000602783 CHGAP10645 457 aaKnown RBP32.4■■■□□ 2.78
PPFIA3-209ENST00000602783 GCC2Q8IWJ2 1684 aa32.4■■■□□ 2.78
PPFIA3-209ENST00000602783 HDGFP51858 240 aaKnown RBP32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms