RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 MAP3K1Q13233 1512 aa8.76□□□□□ -1.01
HCG18-243ENST00000602498 DMRT2Q9Y5R5 561 aa8.76□□□□□ -1.01
HCG18-243ENST00000602498 NPATQ14207 1427 aa8.75□□□□□ -1.01
HCG18-243ENST00000602498 ZNF335Q9H4Z2 1342 aaPredicted RBP8.75□□□□□ -1.01
HCG18-243ENST00000602498 DAPK1P53355 1430 aa8.74□□□□□ -1.01
HCG18-243ENST00000602498 NCOA1Q15788 1441 aa8.74□□□□□ -1.01
HCG18-243ENST00000602498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
HCG18-243ENST00000602498 ARHGEF5Q12774 1597 aa8.73□□□□□ -1.01
HCG18-243ENST00000602498 C3P01024 1663 aa8.72□□□□□ -1.01
HCG18-243ENST00000602498 CAMSAP1Q5T5Y3 1602 aa8.72□□□□□ -1.01
HCG18-243ENST00000602498 ANKRD30AQ9BXX3 1397 aa8.72□□□□□ -1.01
HCG18-243ENST00000602498 PKD2Q13563 968 aa8.71□□□□□ -1.02
HCG18-243ENST00000602498 CLTCQ00610 1675 aaKnown RBP8.71□□□□□ -1.02
HCG18-243ENST00000602498 PZPP20742 1482 aa8.7□□□□□ -1.02
HCG18-243ENST00000602498 KDM5DQ9BY66 1539 aa8.7□□□□□ -1.02
HCG18-243ENST00000602498 ADRA2BP18089 450 aa8.7□□□□□ -1.02
HCG18-243ENST00000602498 ANKLE2Q86XL3 938 aa8.7□□□□□ -1.02
HCG18-243ENST00000602498 PTPRTO14522 1441 aa8.7□□□□□ -1.02
HCG18-243ENST00000602498 TCOF1Q13428 1488 aaKnown RBP8.7□□□□□ -1.02
HCG18-243ENST00000602498 PTPN23Q9H3S7 1636 aa8.69□□□□□ -1.02
HCG18-243ENST00000602498 THEMISQ8N1K5 641 aaPredicted RBP8.69□□□□□ -1.02
HCG18-243ENST00000602498 STAG3Q9UJ98 1225 aa8.69□□□□□ -1.02
HCG18-243ENST00000602498 A2ML1A8K2U0 1454 aa8.69□□□□□ -1.02
HCG18-243ENST00000602498 ABCC3O15438 1527 aa8.69□□□□□ -1.02
HCG18-243ENST00000602498 PREX1Q8TCU6 1659 aa8.69□□□□□ -1.02
HCG18-243ENST00000602498 DUOX2Q9NRD8 1548 aa8.68□□□□□ -1.02
HCG18-243ENST00000602498 ADGBQ8N7X0 1667 aa8.68□□□□□ -1.02
HCG18-243ENST00000602498 LTKP29376 864 aa8.67□□□□□ -1.02
HCG18-243ENST00000602498 ERVK-7P63135 1459 aa8.67□□□□□ -1.02
HCG18-243ENST00000602498 KANK1Q14678 1352 aa8.67□□□□□ -1.02
HCG18-243ENST00000602498 ERBINQ96RT1 1412 aa8.67□□□□□ -1.02
HCG18-243ENST00000602498 SCAF1Q9H7N4 1312 aaKnown RBP8.67□□□□□ -1.02
HCG18-243ENST00000602498 SHANK2Q9UPX8 1470 aa8.67□□□□□ -1.02
HCG18-243ENST00000602498 CEP170BQ9Y4F5 1589 aaPredicted RBP8.67□□□□□ -1.02
HCG18-243ENST00000602498 MAST1Q9Y2H9 1570 aa8.66□□□□□ -1.02
HCG18-243ENST00000602498 UBAP1LF5GYI3 381 aa8.66□□□□□ -1.02
HCG18-243ENST00000602498 CHGAP10645 457 aaKnown RBP8.66□□□□□ -1.02
HCG18-243ENST00000602498 PIP4K2BP78356 416 aa8.66□□□□□ -1.02
HCG18-243ENST00000602498 IDI1Q13907 227 aa8.66□□□□□ -1.02
HCG18-243ENST00000602498 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
HCG18-243ENST00000602498 ANKRD50Q9ULJ7 1429 aa8.65□□□□□ -1.02
HCG18-243ENST00000602498 NUTM2DQ5VT03 806 aaPredicted RBP8.65□□□□□ -1.02
HCG18-243ENST00000602498 BCANQ96GW7 911 aa8.65□□□□□ -1.02
HCG18-243ENST00000602498 MYO3AQ8NEV4 1616 aa8.65□□□□□ -1.03
HCG18-243ENST00000602498 FAM135AQ9P2D6 1515 aa8.64□□□□□ -1.03
HCG18-243ENST00000602498 PLA2R1Q13018 1463 aa8.64□□□□□ -1.03
HCG18-243ENST00000602498 STRCQ7RTU9 1775 aa8.64□□□□□ -1.03
HCG18-243ENST00000602498 UGGT1Q9NYU2 1555 aa8.64□□□□□ -1.03
HCG18-243ENST00000602498 NLRP1Q9C000 1473 aa8.64□□□□□ -1.03
HCG18-243ENST00000602498 NPHP4O75161 1426 aaPredicted RBP8.63□□□□□ -1.03
HCG18-243ENST00000602498 MROH2AA6NES4 1674 aa8.63□□□□□ -1.03
HCG18-243ENST00000602498 MROH1Q8NDA8 1641 aa8.63□□□□□ -1.03
HCG18-243ENST00000602498 RBM33Q96EV2 1170 aaKnown RBP8.63□□□□□ -1.03
HCG18-243ENST00000602498 NUP155O75694 1391 aa8.62□□□□□ -1.03
HCG18-243ENST00000602498 DNMT1P26358 1616 aaKnown RBP8.62□□□□□ -1.03
HCG18-243ENST00000602498 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
HCG18-243ENST00000602498 SLC26A8Q96RN1 970 aa8.62□□□□□ -1.03
HCG18-243ENST00000602498 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
HCG18-243ENST00000602498 ADGRL2O95490 1459 aa8.61□□□□□ -1.03
HCG18-243ENST00000602498 RNF17Q9BXT8 1623 aaKnown RBP8.61□□□□□ -1.03
HCG18-243ENST00000602498 PRDM15P57071 1507 aaPredicted RBP8.6□□□□□ -1.03
HCG18-243ENST00000602498 PPP1R15AO75807 674 aaPredicted RBP8.6□□□□□ -1.03
HCG18-243ENST00000602498 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
HCG18-243ENST00000602498 SPATA31D1Q6ZQQ2 1576 aa8.6□□□□□ -1.03
HCG18-243ENST00000602498 SETD1BQ9UPS6 1966 aaKnown RBP8.59□□□□□ -1.03
HCG18-243ENST00000602498 TRIM52Q96A61 297 aa8.59□□□□□ -1.03
HCG18-243ENST00000602498 ROCK1Q13464 1354 aa8.59□□□□□ -1.03
HCG18-243ENST00000602498 TMEM2Q9UHN6 1383 aa8.59□□□□□ -1.03
HCG18-243ENST00000602498 SCAF11Q99590 1463 aaKnown RBP8.58□□□□□ -1.04
HCG18-243ENST00000602498 NEURL4Q96JN8 1562 aa8.58□□□□□ -1.04
HCG18-243ENST00000602498 HSPA1LP34931 641 aa8.58□□□□□ -1.04
HCG18-243ENST00000602498 SLC52A1Q9NWF4 448 aa8.58□□□□□ -1.04
HCG18-243ENST00000602498 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
HCG18-243ENST00000602498 NOS1P29475 1434 aa8.57□□□□□ -1.04
HCG18-243ENST00000602498 DISP3Q9P2K9 1392 aa8.57□□□□□ -1.04
HCG18-243ENST00000602498 ZNF142P52746 1687 aaPredicted RBP8.56□□□□□ -1.04
HCG18-243ENST00000602498 TOM1O60784 492 aa8.56□□□□□ -1.04
HCG18-243ENST00000602498 ZNF326Q5BKZ1 582 aaKnown RBP8.56□□□□□ -1.04
HCG18-243ENST00000602498 CEP152O94986 1710 aa8.56□□□□□ -1.04
HCG18-243ENST00000602498 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
HCG18-243ENST00000602498 LMTK2Q8IWU2 1503 aa8.55□□□□□ -1.04
HCG18-243ENST00000602498 RRBP1Q9P2E9 1410 aaKnown RBP8.54□□□□□ -1.04
HCG18-243ENST00000602498 VWDEQ8N2E2 1590 aa8.54□□□□□ -1.04
HCG18-243ENST00000602498 MED14O60244 1454 aa8.54□□□□□ -1.04
HCG18-243ENST00000602498 ARHGAP23Q9P227 1491 aa8.54□□□□□ -1.04
HCG18-243ENST00000602498 PROSER2Q86WR7 435 aaPredicted RBP8.54□□□□□ -1.04
HCG18-243ENST00000602498 EFCAB6Q5THR3 1501 aa8.54□□□□□ -1.04
HCG18-243ENST00000602498 RIMS2Q9UQ26 1411 aa8.54□□□□□ -1.04
HCG18-243ENST00000602498 SYNMO15061 1565 aa8.53□□□□□ -1.04
HCG18-243ENST00000602498 KCNA6P17658 529 aa8.53□□□□□ -1.04
HCG18-243ENST00000602498 ILDR2Q71H61 639 aa8.53□□□□□ -1.04
HCG18-243ENST00000602498 NAIPQ13075 1403 aa8.53□□□□□ -1.04
HCG18-243ENST00000602498 ZC3H13Q5T200 1668 aaKnown RBP8.53□□□□□ -1.04
HCG18-243ENST00000602498 TMEM94Q12767 1356 aa8.52□□□□□ -1.05
HCG18-243ENST00000602498 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
HCG18-243ENST00000602498 LRRC7Q96NW7 1537 aa8.52□□□□□ -1.05
HCG18-243ENST00000602498 PIK3C2BO00750 1634 aa8.51□□□□□ -1.05
HCG18-243ENST00000602498 DEPDC5O75140 1603 aa8.51□□□□□ -1.05
HCG18-243ENST00000602498 SLIT1O75093 1534 aa8.51□□□□□ -1.05
HCG18-243ENST00000602498 CPS1P31327 1500 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms