RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 MYT1LQ9UL68 1186 aa29.02■■■□□ 2.24
SIN3B-212ENST00000602204 REREQ9P2R6 1566 aa29.01■■■□□ 2.24
SIN3B-212ENST00000602204 MPHOSPH9Q99550 1183 aa28.98■■■□□ 2.23
SIN3B-212ENST00000602204 PRDM15P57071 1507 aaPredicted RBP28.97■■■□□ 2.23
SIN3B-212ENST00000602204 FAM135AQ9P2D6 1515 aa28.97■■■□□ 2.23
SIN3B-212ENST00000602204 NUP155O75694 1391 aa28.97■■■□□ 2.23
SIN3B-212ENST00000602204 COL17A1Q9UMD9 1497 aaPredicted RBP28.97■■■□□ 2.23
SIN3B-212ENST00000602204 ARHGEF40Q8TER5 1519 aa28.96■■■□□ 2.23
SIN3B-212ENST00000602204 TRHP20396 242 aaPredicted RBP28.95■■■□□ 2.22
SIN3B-212ENST00000602204 MROH1Q8NDA8 1641 aa28.94■■■□□ 2.22
SIN3B-212ENST00000602204 VWDEQ8N2E2 1590 aa28.94■■■□□ 2.22
SIN3B-212ENST00000602204 YEATS2Q9ULM3 1422 aa28.92■■■□□ 2.22
SIN3B-212ENST00000602204 SLC4A1APQ9BWU0 796 aaKnown RBP28.91■■■□□ 2.22
SIN3B-212ENST00000602204 ATP10AO60312 1499 aa28.91■■■□□ 2.22
SIN3B-212ENST00000602204 TET3O43151 1660 aa28.89■■■□□ 2.22
SIN3B-212ENST00000602204 AGLP35573 1532 aa28.87■■■□□ 2.21
SIN3B-212ENST00000602204 KANK1Q14678 1352 aa28.85■■■□□ 2.21
SIN3B-212ENST00000602204 ZC3H13Q5T200 1668 aaKnown RBP28.83■■■□□ 2.21
SIN3B-212ENST00000602204 KIF3BO15066 747 aa28.83■■■□□ 2.21
SIN3B-212ENST00000602204 LMTK2Q8IWU2 1503 aa28.83■■■□□ 2.21
SIN3B-212ENST00000602204 ANKRD30BQ9BXX2 1392 aa28.82■■■□□ 2.2
SIN3B-212ENST00000602204 CEP152O94986 1710 aa28.81■■■□□ 2.2
SIN3B-212ENST00000602204 E9PCH4 1651 aa28.8■■■□□ 2.2
SIN3B-212ENST00000602204 PKD2Q13563 968 aa28.78■■■□□ 2.2
SIN3B-212ENST00000602204 TIMELESSQ9UNS1 1208 aa28.78■■■□□ 2.2
SIN3B-212ENST00000602204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.77■■■□□ 2.24e-7■■■□□ 19.1
SIN3B-212ENST00000602204 EFCAB6Q5THR3 1501 aa28.74■■■□□ 2.19
SIN3B-212ENST00000602204 SPHKAPQ2M3C7 1700 aa28.73■■■□□ 2.19
SIN3B-212ENST00000602204 SIGLEC1Q9BZZ2 1709 aa28.73■■■□□ 2.19
SIN3B-212ENST00000602204 RPRD2Q5VT52 1461 aaKnown RBP28.72■■■□□ 2.19
SIN3B-212ENST00000602204 ABCC3O15438 1527 aa28.71■■■□□ 2.19
SIN3B-212ENST00000602204 CAMSAP1Q5T5Y3 1602 aa28.7■■■□□ 2.19
SIN3B-212ENST00000602204 SIN3AQ96ST3 1273 aa28.7■■■□□ 2.18
SIN3B-212ENST00000602204 FOXD1Q16676 465 aa28.67■■■□□ 2.18
SIN3B-212ENST00000602204 PPP6R1Q9UPN7 881 aa28.66■■■□□ 2.18
SIN3B-212ENST00000602204 TRPM2O94759 1503 aa28.64■■■□□ 2.17
SIN3B-212ENST00000602204 NEUROD1Q13562 356 aa28.62■■■□□ 2.17
SIN3B-212ENST00000602204 TONSLQ96HA7 1378 aa28.62■■■□□ 2.17
SIN3B-212ENST00000602204 PTPRTO14522 1441 aa28.61■■■□□ 2.17
SIN3B-212ENST00000602204 GGT6Q6P531 493 aa28.61■■■□□ 2.17
SIN3B-212ENST00000602204 PLA2R1Q13018 1463 aa28.6■■■□□ 2.17
SIN3B-212ENST00000602204 ARHGAP31Q2M1Z3 1444 aa28.6■■■□□ 2.17
SIN3B-212ENST00000602204 CCDC144AA2RUR9 1427 aa28.56■■■□□ 2.16
SIN3B-212ENST00000602204 CFAP65Q6ZU64 1925 aaKnown RBP28.56■■■□□ 2.16
SIN3B-212ENST00000602204 WASHC2CQ9Y4E1 1318 aa28.56■■■□□ 2.16
SIN3B-212ENST00000602204 CLTCQ00610 1675 aaKnown RBP28.55■■■□□ 2.16
SIN3B-212ENST00000602204 NEURL4Q96JN8 1562 aa28.53■■■□□ 2.16
SIN3B-212ENST00000602204 NPATQ14207 1427 aa28.52■■■□□ 2.16
SIN3B-212ENST00000602204 KIF1BO60333 1816 aa28.52■■■□□ 2.16
SIN3B-212ENST00000602204 MROH2AA6NES4 1674 aa28.51■■■□□ 2.16
SIN3B-212ENST00000602204 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
SIN3B-212ENST00000602204 PREX1Q8TCU6 1659 aa28.5■■■□□ 2.15
SIN3B-212ENST00000602204 CNTLNQ9NXG0 1405 aa28.49■■■□□ 2.15
SIN3B-212ENST00000602204 NOS1P29475 1434 aa28.45■■■□□ 2.15
SIN3B-212ENST00000602204 PPP1R15AO75807 674 aaPredicted RBP28.45■■■□□ 2.14
SIN3B-212ENST00000602204 PIK3C2BO00750 1634 aa28.44■■■□□ 2.14
SIN3B-212ENST00000602204 FER1L4A9Z1Z3 1794 aa28.42■■■□□ 2.14
SIN3B-212ENST00000602204 SYNMO15061 1565 aa28.4■■■□□ 2.14
SIN3B-212ENST00000602204 L3MBTL2Q969R5 705 aa28.39■■■□□ 2.14
SIN3B-212ENST00000602204 ARID4BQ4LE39 1312 aaPredicted RBP28.39■■■□□ 2.13
SIN3B-212ENST00000602204 SPATA31E1Q6ZUB1 1445 aa28.38■■■□□ 2.13
SIN3B-212ENST00000602204 SPATA31D1Q6ZQQ2 1576 aa28.37■■■□□ 2.13
SIN3B-212ENST00000602204 ERVK-7P63135 1459 aa28.35■■■□□ 2.13
SIN3B-212ENST00000602204 UGGT1Q9NYU2 1555 aa28.33■■■□□ 2.13
SIN3B-212ENST00000602204 IFT172Q9UG01 1749 aa28.33■■■□□ 2.13
SIN3B-212ENST00000602204 ADGRB3O60242 1522 aa28.33■■■□□ 2.13
SIN3B-212ENST00000602204 MLECQ14165 292 aa28.32■■■□□ 2.12
SIN3B-212ENST00000602204 ESF1Q9H501 851 aaKnown RBP28.32■■■□□ 2.12
SIN3B-212ENST00000602204 UHRF1BP1Q6BDS2 1440 aa28.32■■■□□ 2.12
SIN3B-212ENST00000602204 C3P01024 1663 aa28.27■■■□□ 2.12
SIN3B-212ENST00000602204 STAC3Q96MF2 364 aa28.27■■■□□ 2.12
SIN3B-212ENST00000602204 ZMYM3Q14202 1370 aa28.26■■■□□ 2.12
SIN3B-212ENST00000602204 ADAMTSL3P82987 1691 aa28.26■■■□□ 2.12
SIN3B-212ENST00000602204 SLC52A1Q9NWF4 448 aa28.26■■■□□ 2.11
SIN3B-212ENST00000602204 PPLO60437 1756 aa28.24■■■□□ 2.11
SIN3B-212ENST00000602204 MYO5BQ9ULV0 1848 aa28.24■■■□□ 2.11
SIN3B-212ENST00000602204 KDM5AP29375 1690 aaKnown RBP28.23■■■□□ 2.11
SIN3B-212ENST00000602204 TMEM131LA2VDJ0 1609 aa28.21■■■□□ 2.11
SIN3B-212ENST00000602204 MADDQ8WXG6 1647 aa28.21■■■□□ 2.11
SIN3B-212ENST00000602204 TRPM1Q7Z4N2 1603 aa28.2■■■□□ 2.1
SIN3B-212ENST00000602204 MYOM2P54296 1465 aa28.19■■■□□ 2.1
SIN3B-212ENST00000602204 PRAG1Q86YV5 1406 aa28.18■■■□□ 2.1
SIN3B-212ENST00000602204 DCAF11Q8TEB1 546 aa28.18■■■□□ 2.1
SIN3B-212ENST00000602204 RALGAPBQ86X10 1494 aa28.18■■■□□ 2.1
SIN3B-212ENST00000602204 RIMS1Q86UR5 1692 aaKnown RBP28.18■■■□□ 2.1
SIN3B-212ENST00000602204 KIAA1210Q9ULL0 1709 aa28.18■■■□□ 2.1
SIN3B-212ENST00000602204 RGL3Q3MIN7 710 aa28.16■■■□□ 2.1
SIN3B-212ENST00000602204 NBPF8Q3BBV2 869 aa28.15■■■□□ 2.1
SIN3B-212ENST00000602204 RPGRIP1LQ68CZ1 1315 aa28.15■■■□□ 2.1
SIN3B-212ENST00000602204 LAMC1P11047 1609 aa28.14■■■□□ 2.1
SIN3B-212ENST00000602204 FBXO31Q5XUX0 539 aaPredicted RBP28.14■■■□□ 2.1
SIN3B-212ENST00000602204 IDI1Q13907 227 aa28.12■■■□□ 2.09
SIN3B-212ENST00000602204 TNRQ92752 1358 aa28.11■■■□□ 2.09
SIN3B-212ENST00000602204 NEXMIFQ5QGS0 1516 aa28.1■■■□□ 2.09
SIN3B-212ENST00000602204 NRXN1Q9ULB1 1477 aa28.09■■■□□ 2.09
SIN3B-212ENST00000602204 ZNF316A6NFI3 1004 aaPredicted RBP28.09■■■□□ 2.09
SIN3B-212ENST00000602204 NLRP1Q9C000 1473 aa28.08■■■□□ 2.09
SIN3B-212ENST00000602204 KDM2AQ9Y2K7 1162 aa28.08■■■□□ 2.09
SIN3B-212ENST00000602204 UBR1Q8IWV7 1749 aa28.06■■■□□ 2.08
SIN3B-212ENST00000602204 SETD1BQ9UPS6 1966 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms