RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 ZNF142P52746 1687 aaPredicted RBP36.81■■■■□ 3.48
GTPBP3-227ENST00000602056 PLA2R1Q13018 1463 aa36.81■■■■□ 3.48
GTPBP3-227ENST00000602056 TCOF1Q13428 1488 aaKnown RBP36.78■■■■□ 3.48
GTPBP3-227ENST00000602056 PKD2Q13563 968 aa36.78■■■■□ 3.48
GTPBP3-227ENST00000602056 WASHC2CQ9Y4E1 1318 aa36.77■■■■□ 3.48
GTPBP3-227ENST00000602056 KDM5DQ9BY66 1539 aa36.76■■■■□ 3.48
GTPBP3-227ENST00000602056 MYOM3Q5VTT5 1437 aa36.76■■■■□ 3.47
GTPBP3-227ENST00000602056 A2ML1A8K2U0 1454 aa36.75■■■■□ 3.47
GTPBP3-227ENST00000602056 TNRQ92752 1358 aa36.74■■■■□ 3.47
GTPBP3-227ENST00000602056 MIA2Q96PC5 1412 aa36.74■■■■□ 3.47
GTPBP3-227ENST00000602056 PZPP20742 1482 aa36.74■■■■□ 3.47
GTPBP3-227ENST00000602056 ZNF335Q9H4Z2 1342 aaPredicted RBP36.72■■■■□ 3.47
GTPBP3-227ENST00000602056 FAM135AQ9P2D6 1515 aa36.72■■■■□ 3.47
GTPBP3-227ENST00000602056 MAST1Q9Y2H9 1570 aa36.7■■■■□ 3.46
GTPBP3-227ENST00000602056 DNMT1P26358 1616 aaKnown RBP36.67■■■■□ 3.46
GTPBP3-227ENST00000602056 IQSEC2Q5JU85 1478 aa36.64■■■■□ 3.46
GTPBP3-227ENST00000602056 RNF17Q9BXT8 1623 aaKnown RBP36.59■■■■□ 3.45
GTPBP3-227ENST00000602056 ABCC3O15438 1527 aa36.58■■■■□ 3.45
GTPBP3-227ENST00000602056 ABCC5O15440 1437 aa36.54■■■■□ 3.44
GTPBP3-227ENST00000602056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.53■■■■□ 3.44
GTPBP3-227ENST00000602056 APLP2Q06481 763 aa36.53■■■■□ 3.44
GTPBP3-227ENST00000602056 NLRP1Q9C000 1473 aa36.53■■■■□ 3.44
GTPBP3-227ENST00000602056 MROH1Q8NDA8 1641 aa36.52■■■■□ 3.44
GTPBP3-227ENST00000602056 NEURL4Q96JN8 1562 aa36.5■■■■□ 3.43
GTPBP3-227ENST00000602056 EIF2AK4Q9P2K8 1649 aaKnown RBP36.49■■■■□ 3.43
GTPBP3-227ENST00000602056 THEMISQ8N1K5 641 aaPredicted RBP36.49■■■■□ 3.43
GTPBP3-227ENST00000602056 DUOX2Q9NRD8 1548 aa36.49■■■■□ 3.43
GTPBP3-227ENST00000602056 KIF15Q9NS87 1388 aa36.48■■■■□ 3.43
GTPBP3-227ENST00000602056 SHANK2Q9UPX8 1470 aa36.46■■■■□ 3.43
GTPBP3-227ENST00000602056 ANKLE2Q86XL3 938 aa36.46■■■■□ 3.43
GTPBP3-227ENST00000602056 RRP7BPQ9NSQ0 103 aa36.46■■■■□ 3.43
GTPBP3-227ENST00000602056 UGGT1Q9NYU2 1555 aa36.45■■■■□ 3.43
GTPBP3-227ENST00000602056 PTPN23Q9H3S7 1636 aa36.45■■■■□ 3.42
GTPBP3-227ENST00000602056 SPATA31D1Q6ZQQ2 1576 aa36.44■■■■□ 3.42
GTPBP3-227ENST00000602056 ERVK-7P63135 1459 aa36.44■■■■□ 3.42
GTPBP3-227ENST00000602056 FGD6Q6ZV73 1430 aa36.44■■■■□ 3.42
GTPBP3-227ENST00000602056 UBAP1LF5GYI3 381 aa36.42■■■■□ 3.42
GTPBP3-227ENST00000602056 DAPK1P53355 1430 aa36.42■■■■□ 3.42
GTPBP3-227ENST00000602056 ZC3H13Q5T200 1668 aaKnown RBP36.42■■■■□ 3.42
GTPBP3-227ENST00000602056 POLR1AO95602 1720 aaPredicted RBP36.37■■■■□ 3.41
GTPBP3-227ENST00000602056 ERBINQ96RT1 1412 aa36.37■■■■□ 3.41
GTPBP3-227ENST00000602056 MED14O60244 1454 aa36.36■■■■□ 3.41
GTPBP3-227ENST00000602056 NPHP4O75161 1426 aaPredicted RBP36.35■■■■□ 3.41
GTPBP3-227ENST00000602056 CROCC2H7BZ55 1655 aa36.35■■■■□ 3.41
GTPBP3-227ENST00000602056 DISP3Q9P2K9 1392 aa36.34■■■■□ 3.41
GTPBP3-227ENST00000602056 PRDM15P57071 1507 aaPredicted RBP36.33■■■■□ 3.41
GTPBP3-227ENST00000602056 CEP152O94986 1710 aa36.32■■■■□ 3.4
GTPBP3-227ENST00000602056 CHIC2Q9UKJ5 165 aa36.32■■■■□ 3.4
GTPBP3-227ENST00000602056 ARHGAP31Q2M1Z3 1444 aa36.31■■■■□ 3.4
GTPBP3-227ENST00000602056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.3■■■■□ 3.44e-9■■■□□ 16.1
GTPBP3-227ENST00000602056 VWDEQ8N2E2 1590 aa36.3■■■■□ 3.4
GTPBP3-227ENST00000602056 DEPDC5O75140 1603 aa36.3■■■■□ 3.4
GTPBP3-227ENST00000602056 CPS1P31327 1500 aa36.29■■■■□ 3.4
GTPBP3-227ENST00000602056 ILDR2Q71H61 639 aa36.26■■■■□ 3.4
GTPBP3-227ENST00000602056 ANKRD30AQ9BXX3 1397 aa36.26■■■■□ 3.39
GTPBP3-227ENST00000602056 LTKP29376 864 aa36.18■■■■□ 3.38
GTPBP3-227ENST00000602056 KANK1Q14678 1352 aa36.17■■■■□ 3.38
GTPBP3-227ENST00000602056 IQGAP1P46940 1657 aa36.17■■■■□ 3.38
GTPBP3-227ENST00000602056 UBR1Q8IWV7 1749 aa36.17■■■■□ 3.38
GTPBP3-227ENST00000602056 ARHGAP23Q9P227 1491 aa36.16■■■■□ 3.38
GTPBP3-227ENST00000602056 CFAP65Q6ZU64 1925 aaKnown RBP36.16■■■■□ 3.38
GTPBP3-227ENST00000602056 FAM50AQ14320 339 aaKnown RBP36.15■■■■□ 3.38
GTPBP3-227ENST00000602056 ADGRL2O95490 1459 aa36.14■■■■□ 3.38
GTPBP3-227ENST00000602056 LMTK2Q8IWU2 1503 aa36.13■■■■□ 3.38
GTPBP3-227ENST00000602056 SCAF11Q99590 1463 aaKnown RBP36.13■■■■□ 3.37
GTPBP3-227ENST00000602056 TOM1O60784 492 aa36.13■■■■□ 3.37
GTPBP3-227ENST00000602056 PIP4K2BP78356 416 aa36.13■■■■□ 3.37
GTPBP3-227ENST00000602056 TXNDC2Q86VQ3 553 aa36.12■■■■□ 3.37
GTPBP3-227ENST00000602056 SLIT1O75093 1534 aa36.12■■■■□ 3.37
GTPBP3-227ENST00000602056 SCAF1Q9H7N4 1312 aaKnown RBP36.09■■■■□ 3.37
GTPBP3-227ENST00000602056 HSPA1LP34931 641 aa36.08■■■■□ 3.37
GTPBP3-227ENST00000602056 IDI1Q13907 227 aa36.08■■■■□ 3.37
GTPBP3-227ENST00000602056 ALKQ9UM73 1620 aa36.06■■■■□ 3.36
GTPBP3-227ENST00000602056 LRRC7Q96NW7 1537 aa36.06■■■■□ 3.36
GTPBP3-227ENST00000602056 TMEM2Q9UHN6 1383 aa36.05■■■■□ 3.36
GTPBP3-227ENST00000602056 STRCP1A6NGW2 1772 aa36.04■■■■□ 3.36
GTPBP3-227ENST00000602056 PIK3C2BO00750 1634 aa36.04■■■■□ 3.36
GTPBP3-227ENST00000602056 NOS1P29475 1434 aa36.02■■■■□ 3.36
GTPBP3-227ENST00000602056 ANKRD50Q9ULJ7 1429 aa36.01■■■■□ 3.36
GTPBP3-227ENST00000602056 EID1Q9Y6B2 187 aa36.01■■■■□ 3.36
GTPBP3-227ENST00000602056 EFCAB6Q5THR3 1501 aa35.99■■■■□ 3.35
GTPBP3-227ENST00000602056 SYNMO15061 1565 aa35.99■■■■□ 3.35
GTPBP3-227ENST00000602056 STAG3Q9UJ98 1225 aa35.99■■■■□ 3.35
GTPBP3-227ENST00000602056 SOCS7O14512 581 aa35.93■■■■□ 3.34
GTPBP3-227ENST00000602056 SLC52A1Q9NWF4 448 aa35.89■■■■□ 3.34
GTPBP3-227ENST00000602056 KDM5AP29375 1690 aaKnown RBP35.88■■■■□ 3.33
GTPBP3-227ENST00000602056 RPRD2Q5VT52 1461 aaKnown RBP35.86■■■■□ 3.33
GTPBP3-227ENST00000602056 ADGRB3O60242 1522 aa35.84■■■■□ 3.33
GTPBP3-227ENST00000602056 SLC26A8Q96RN1 970 aa35.83■■■■□ 3.33
GTPBP3-227ENST00000602056 ROCK1Q13464 1354 aa35.82■■■■□ 3.32
GTPBP3-227ENST00000602056 TET3O43151 1660 aa35.81■■■■□ 3.32
GTPBP3-227ENST00000602056 PPARGC1BQ86YN6 1023 aaKnown RBP35.79■■■■□ 3.32
GTPBP3-227ENST00000602056 KCNA6P17658 529 aa35.78■■■■□ 3.32
GTPBP3-227ENST00000602056 SENP3Q9H4L4 574 aaPredicted RBP35.77■■■■□ 3.32
GTPBP3-227ENST00000602056 UNC13BO14795 1591 aa35.76■■■■□ 3.31
GTPBP3-227ENST00000602056 MED1Q15648 1581 aaPredicted RBP35.76■■■■□ 3.31
GTPBP3-227ENST00000602056 ZFYVE9O95405 1425 aa35.74■■■■□ 3.31
GTPBP3-227ENST00000602056 TMEM94Q12767 1356 aa35.73■■■■□ 3.31
GTPBP3-227ENST00000602056 ITGAEP38570 1179 aa35.71■■■■□ 3.31
GTPBP3-227ENST00000602056 XIRP1Q702N8 1843 aaKnown RBP35.71■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms