RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 MIA2Q96PC5 1412 aa16.83■□□□□ 0.28
NOTCH3-206ENST00000601011 ARHGAP5Q13017 1502 aa16.83■□□□□ 0.28
NOTCH3-206ENST00000601011 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
NOTCH3-206ENST00000601011 SRPK2P78362 688 aaKnown RBP16.83■□□□□ 0.28
NOTCH3-206ENST00000601011 UGGT2Q9NYU1 1516 aa16.82■□□□□ 0.28
NOTCH3-206ENST00000601011 GPATCH8Q9UKJ3 1502 aaKnown RBP16.82■□□□□ 0.28
NOTCH3-206ENST00000601011 POGKQ9P215 609 aa16.82■□□□□ 0.28
NOTCH3-206ENST00000601011 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
NOTCH3-206ENST00000601011 PPP4R2Q9NY27 417 aa16.81■□□□□ 0.28
NOTCH3-206ENST00000601011 ATP10BO94823 1461 aa16.81■□□□□ 0.28
NOTCH3-206ENST00000601011 C14orf37Q86TY3 774 aa16.8■□□□□ 0.28
NOTCH3-206ENST00000601011 WASHC2CQ9Y4E1 1318 aa16.8■□□□□ 0.28
NOTCH3-206ENST00000601011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
NOTCH3-206ENST00000601011 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
NOTCH3-206ENST00000601011 SCAPERQ9BY12 1400 aa16.79■□□□□ 0.28
NOTCH3-206ENST00000601011 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
NOTCH3-206ENST00000601011 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
NOTCH3-206ENST00000601011 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
NOTCH3-206ENST00000601011 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
NOTCH3-206ENST00000601011 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
NOTCH3-206ENST00000601011 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
NOTCH3-206ENST00000601011 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.28
NOTCH3-206ENST00000601011 AKNAQ7Z591 1439 aa16.77■□□□□ 0.27
NOTCH3-206ENST00000601011 CFAP43Q8NDM7 1665 aa16.76■□□□□ 0.27
NOTCH3-206ENST00000601011 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
NOTCH3-206ENST00000601011 KTN1Q86UP2 1357 aaKnown RBP16.74■□□□□ 0.27
NOTCH3-206ENST00000601011 EXOC6Q8TAG9 804 aa16.74■□□□□ 0.27
NOTCH3-206ENST00000601011 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
NOTCH3-206ENST00000601011 WDR62O43379 1518 aa16.73■□□□□ 0.27
NOTCH3-206ENST00000601011 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
NOTCH3-206ENST00000601011 MORC1Q86VD1 984 aa16.73■□□□□ 0.27
NOTCH3-206ENST00000601011 NEFMP07197 916 aa16.72■□□□□ 0.27
NOTCH3-206ENST00000601011 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
NOTCH3-206ENST00000601011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.27
NOTCH3-206ENST00000601011 NUDCQ9Y266 331 aa16.71■□□□□ 0.26
NOTCH3-206ENST00000601011 KIF14Q15058 1648 aa16.7■□□□□ 0.26
NOTCH3-206ENST00000601011 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
NOTCH3-206ENST00000601011 KANK1Q14678 1352 aa16.7■□□□□ 0.26
NOTCH3-206ENST00000601011 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
NOTCH3-206ENST00000601011 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
NOTCH3-206ENST00000601011 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
NOTCH3-206ENST00000601011 NOP58Q9Y2X3 529 aaKnown RBP16.69■□□□□ 0.26
NOTCH3-206ENST00000601011 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
NOTCH3-206ENST00000601011 RAPGEF6Q8TEU7 1601 aa16.68■□□□□ 0.26
NOTCH3-206ENST00000601011 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
NOTCH3-206ENST00000601011 MINK1Q8N4C8 1332 aaPredicted RBP16.68■□□□□ 0.26
NOTCH3-206ENST00000601011 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
NOTCH3-206ENST00000601011 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
NOTCH3-206ENST00000601011 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
NOTCH3-206ENST00000601011 APAF1O14727 1248 aa16.67■□□□□ 0.26
NOTCH3-206ENST00000601011 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
NOTCH3-206ENST00000601011 LMOD2Q6P5Q4 547 aa16.67■□□□□ 0.26
NOTCH3-206ENST00000601011 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
NOTCH3-206ENST00000601011 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
NOTCH3-206ENST00000601011 SLC12A5Q9H2X9 1139 aa16.66■□□□□ 0.26
NOTCH3-206ENST00000601011 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
NOTCH3-206ENST00000601011 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
NOTCH3-206ENST00000601011 FAM69CQ0P6D2 419 aa16.65■□□□□ 0.26
NOTCH3-206ENST00000601011 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
NOTCH3-206ENST00000601011 TCERG1O14776 1098 aaKnown RBP16.64■□□□□ 0.25
NOTCH3-206ENST00000601011 MSH5O43196 834 aa16.64■□□□□ 0.25
NOTCH3-206ENST00000601011 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
NOTCH3-206ENST00000601011 RALBP1Q15311 655 aa16.63■□□□□ 0.25
NOTCH3-206ENST00000601011 ELL2O00472 640 aaPredicted RBP16.63■□□□□ 0.25
NOTCH3-206ENST00000601011 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
NOTCH3-206ENST00000601011 FBLN1P23142 703 aa16.61■□□□□ 0.25
NOTCH3-206ENST00000601011 PZPP20742 1482 aa16.6■□□□□ 0.25
NOTCH3-206ENST00000601011 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
NOTCH3-206ENST00000601011 TRAPPC8Q9Y2L5 1435 aa16.6■□□□□ 0.25
NOTCH3-206ENST00000601011 SLC4A3P48751 1232 aa16.6■□□□□ 0.25
NOTCH3-206ENST00000601011 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
NOTCH3-206ENST00000601011 DISP3Q9P2K9 1392 aa16.59■□□□□ 0.25
NOTCH3-206ENST00000601011 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.25
NOTCH3-206ENST00000601011 SYCP2Q9BX26 1530 aa16.58■□□□□ 0.25
NOTCH3-206ENST00000601011 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
NOTCH3-206ENST00000601011 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
NOTCH3-206ENST00000601011 FBXO31Q5XUX0 539 aaPredicted RBP16.57■□□□□ 0.24
NOTCH3-206ENST00000601011 ERCC6L2Q5T890 1561 aa16.57■□□□□ 0.24
NOTCH3-206ENST00000601011 LRRIQ1Q96JM4 1722 aa16.57■□□□□ 0.24
NOTCH3-206ENST00000601011 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.57■□□□□ 0.24
NOTCH3-206ENST00000601011 CCDC141Q6ZP82 1450 aa16.56■□□□□ 0.24
NOTCH3-206ENST00000601011 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
NOTCH3-206ENST00000601011 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
NOTCH3-206ENST00000601011 APBB1O00213 710 aa16.55■□□□□ 0.24
NOTCH3-206ENST00000601011 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
NOTCH3-206ENST00000601011 FTSJ3Q8IY81 847 aaKnown RBP16.53■□□□□ 0.24
NOTCH3-206ENST00000601011 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
NOTCH3-206ENST00000601011 NUP160Q12769 1436 aa16.53■□□□□ 0.24
NOTCH3-206ENST00000601011 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
NOTCH3-206ENST00000601011 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
NOTCH3-206ENST00000601011 RRP1P56182 461 aaKnown RBP16.52■□□□□ 0.24
NOTCH3-206ENST00000601011 GOLGA2Q08379 1002 aa16.51■□□□□ 0.23
NOTCH3-206ENST00000601011 COG6Q9Y2V7 657 aa16.49■□□□□ 0.23
NOTCH3-206ENST00000601011 A0A0G2JS52 829 aa16.49■□□□□ 0.23
NOTCH3-206ENST00000601011 BCAR3O75815 825 aa16.48■□□□□ 0.23
NOTCH3-206ENST00000601011 CFAP65Q6ZU64 1925 aaKnown RBP16.48■□□□□ 0.23
NOTCH3-206ENST00000601011 LTV1Q96GA3 475 aaPredicted RBP16.48■□□□□ 0.23
NOTCH3-206ENST00000601011 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
NOTCH3-206ENST00000601011 MTHFSP49914 203 aa16.47■□□□□ 0.23
NOTCH3-206ENST00000601011 IL27Q8NEV9 243 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms