RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 SHANK2Q9UPX8 1470 aa24.72■■□□□ 1.55
ARHGEF1-221ENST00000600387 NUP155O75694 1391 aa24.71■■□□□ 1.55
ARHGEF1-221ENST00000600387 INSRP06213 1382 aa24.71■■□□□ 1.55
ARHGEF1-221ENST00000600387 ZMYM4Q5VZL5 1548 aa24.7■■□□□ 1.55
ARHGEF1-221ENST00000600387 CDC42BPAQ5VT25 1732 aa24.69■■□□□ 1.54
ARHGEF1-221ENST00000600387 ZNF777Q9ULD5 760 aaPredicted RBP24.69■■□□□ 1.54
ARHGEF1-221ENST00000600387 DDRGK1Q96HY6 314 aa24.68■■□□□ 1.54
ARHGEF1-221ENST00000600387 LAS1LQ9Y4W2 734 aaKnown RBP24.67■■□□□ 1.54
ARHGEF1-221ENST00000600387 TRPM1Q7Z4N2 1603 aa24.65■■□□□ 1.54
ARHGEF1-221ENST00000600387 KDM2AQ9Y2K7 1162 aa24.64■■□□□ 1.54
ARHGEF1-221ENST00000600387 DCAF11Q8TEB1 546 aa24.64■■□□□ 1.53
ARHGEF1-221ENST00000600387 WASHC2CQ9Y4E1 1318 aa24.63■■□□□ 1.53
ARHGEF1-221ENST00000600387 C9orf84Q5VXU9 1444 aa24.63■■□□□ 1.53
ARHGEF1-221ENST00000600387 MRC2Q9UBG0 1479 aa24.63■■□□□ 1.53
ARHGEF1-221ENST00000600387 PTPRGP23470 1445 aa24.63■■□□□ 1.53
ARHGEF1-221ENST00000600387 SALL2Q9Y467 1007 aaPredicted RBP24.63■■□□□ 1.53
ARHGEF1-221ENST00000600387 PLEKHH2Q8IVE3 1493 aa24.62■■□□□ 1.53
ARHGEF1-221ENST00000600387 BLMP54132 1417 aaPredicted RBP24.62■■□□□ 1.53
ARHGEF1-221ENST00000600387 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
ARHGEF1-221ENST00000600387 IFT140Q96RY7 1462 aa24.61■■□□□ 1.53
ARHGEF1-221ENST00000600387 IL27Q8NEV9 243 aa24.6■■□□□ 1.53
ARHGEF1-221ENST00000600387 PLB1Q6P1J6 1458 aa24.59■■□□□ 1.53
ARHGEF1-221ENST00000600387 PER1O15534 1290 aaPredicted RBP24.58■■□□□ 1.53
ARHGEF1-221ENST00000600387 CDCA7LQ96GN5 454 aa24.58■■□□□ 1.53
ARHGEF1-221ENST00000600387 LAMC1P11047 1609 aa24.57■■□□□ 1.52
ARHGEF1-221ENST00000600387 PRAG1Q86YV5 1406 aa24.56■■□□□ 1.52
ARHGEF1-221ENST00000600387 ZNF608Q9ULD9 1512 aaPredicted RBP24.56■■□□□ 1.52
ARHGEF1-221ENST00000600387 CRBNQ96SW2 442 aa24.54■■□□□ 1.52
ARHGEF1-221ENST00000600387 COL17A1Q9UMD9 1497 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF1-221ENST00000600387 TSPY4P0CV99 314 aa24.54■■□□□ 1.52
ARHGEF1-221ENST00000600387 TSPY10P0CW01 314 aa24.54■■□□□ 1.52
ARHGEF1-221ENST00000600387 ANO8Q9HCE9 1232 aaPredicted RBP24.54■■□□□ 1.52
ARHGEF1-221ENST00000600387 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
ARHGEF1-221ENST00000600387 ABCC10Q5T3U5 1492 aa24.52■■□□□ 1.52
ARHGEF1-221ENST00000600387 ARHGEF5Q12774 1597 aa24.52■■□□□ 1.52
ARHGEF1-221ENST00000600387 PLIN1O60240 522 aa24.52■■□□□ 1.52
ARHGEF1-221ENST00000600387 GPRASP1Q5JY77 1395 aa24.51■■□□□ 1.51
ARHGEF1-221ENST00000600387 PRKCSHP14314 528 aaPredicted RBP24.5■■□□□ 1.51
ARHGEF1-221ENST00000600387 FAM135AQ9P2D6 1515 aa24.5■■□□□ 1.51
ARHGEF1-221ENST00000600387 PRDM15P57071 1507 aaPredicted RBP24.49■■□□□ 1.51
ARHGEF1-221ENST00000600387 KDM2BQ8NHM5 1336 aa24.47■■□□□ 1.51
ARHGEF1-221ENST00000600387 CCDC144AA2RUR9 1427 aa24.47■■□□□ 1.51
ARHGEF1-221ENST00000600387 CARMIL2Q6F5E8 1435 aa24.47■■□□□ 1.51
ARHGEF1-221ENST00000600387 PLEKHD1A6NEE1 506 aa24.46■■□□□ 1.51
ARHGEF1-221ENST00000600387 GSE1Q14687 1217 aa24.46■■□□□ 1.51
ARHGEF1-221ENST00000600387 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
ARHGEF1-221ENST00000600387 CENPQQ7L2Z9 268 aaPredicted RBP24.45■■□□□ 1.5
ARHGEF1-221ENST00000600387 EIF2AK4Q9P2K8 1649 aaKnown RBP24.45■■□□□ 1.5
ARHGEF1-221ENST00000600387 CC2D1BQ5T0F9 858 aaKnown RBP24.44■■□□□ 1.5
ARHGEF1-221ENST00000600387 ABCA8O94911 1581 aa24.43■■□□□ 1.5
ARHGEF1-221ENST00000600387 NFKBIBQ15653 356 aa24.43■■□□□ 1.5
ARHGEF1-221ENST00000600387 RTN4Q9NQC3 1192 aaKnown RBP24.43■■□□□ 1.5
ARHGEF1-221ENST00000600387 DAXXQ9UER7 740 aaPredicted RBP24.43■■□□□ 1.5
ARHGEF1-221ENST00000600387 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
ARHGEF1-221ENST00000600387 MYO5CQ9NQX4 1742 aa24.43■■□□□ 1.5
ARHGEF1-221ENST00000600387 DISP3Q9P2K9 1392 aa24.41■■□□□ 1.5
ARHGEF1-221ENST00000600387 TESK2Q96S53 571 aa24.41■■□□□ 1.5
ARHGEF1-221ENST00000600387 ERBINQ96RT1 1412 aa24.41■■□□□ 1.5
ARHGEF1-221ENST00000600387 NBPF1Q3BBV0 1214 aa24.4■■□□□ 1.5
ARHGEF1-221ENST00000600387 PANK3Q9H999 370 aa24.4■■□□□ 1.5
ARHGEF1-221ENST00000600387 A2MP01023 1474 aa24.39■■□□□ 1.5
ARHGEF1-221ENST00000600387 FAM161AQ3B820 660 aa24.39■■□□□ 1.5
ARHGEF1-221ENST00000600387 SKAP1Q86WV1 359 aa24.39■■□□□ 1.5
ARHGEF1-221ENST00000600387 CCDC141Q6ZP82 1450 aa24.38■■□□□ 1.49
ARHGEF1-221ENST00000600387 TMF1P82094 1093 aa24.37■■□□□ 1.49
ARHGEF1-221ENST00000600387 C20orf194Q5TEA3 1177 aa24.37■■□□□ 1.49
ARHGEF1-221ENST00000600387 UNC13BO14795 1591 aa24.37■■□□□ 1.49
ARHGEF1-221ENST00000600387 ATP10BO94823 1461 aa24.36■■□□□ 1.49
ARHGEF1-221ENST00000600387 NUP160Q12769 1436 aa24.36■■□□□ 1.49
ARHGEF1-221ENST00000600387 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
ARHGEF1-221ENST00000600387 HNRNPMP52272 730 aaKnown RBP eCLIP24.35■■□□□ 1.49
ARHGEF1-221ENST00000600387 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.35■■□□□ 1.49
ARHGEF1-221ENST00000600387 RSPH4AQ5TD94 716 aa24.33■■□□□ 1.49
ARHGEF1-221ENST00000600387 C8orf34Q49A92 452 aa24.33■■□□□ 1.49
ARHGEF1-221ENST00000600387 ADAMTS8Q9UP79 889 aa24.33■■□□□ 1.49
ARHGEF1-221ENST00000600387 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
ARHGEF1-221ENST00000600387 RGL3Q3MIN7 710 aa24.32■■□□□ 1.48
ARHGEF1-221ENST00000600387 DUSP27Q5VZP5 1158 aa24.32■■□□□ 1.48
ARHGEF1-221ENST00000600387 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
ARHGEF1-221ENST00000600387 SAMD9LQ8IVG5 1584 aa24.32■■□□□ 1.48
ARHGEF1-221ENST00000600387 CDC42BPBQ9Y5S2 1711 aa24.31■■□□□ 1.48
ARHGEF1-221ENST00000600387 RNF17Q9BXT8 1623 aaKnown RBP24.31■■□□□ 1.48
ARHGEF1-221ENST00000600387 CHMP7Q8WUX9 453 aaPredicted RBP24.31■■□□□ 1.48
ARHGEF1-221ENST00000600387 PREX2Q70Z35 1606 aa24.3■■□□□ 1.48
ARHGEF1-221ENST00000600387 VIRMAQ69YN4 1812 aaKnown RBP24.3■■□□□ 1.48
ARHGEF1-221ENST00000600387 SLC4A3P48751 1232 aa24.3■■□□□ 1.48
ARHGEF1-221ENST00000600387 JPH4Q96JJ6 628 aa24.3■■□□□ 1.48
ARHGEF1-221ENST00000600387 BRPF3Q9ULD4 1205 aa24.3■■□□□ 1.48
ARHGEF1-221ENST00000600387 IQGAP3Q86VI3 1631 aa24.29■■□□□ 1.48
ARHGEF1-221ENST00000600387 FRAT1Q92837 279 aaPredicted RBP24.29■■□□□ 1.48
ARHGEF1-221ENST00000600387 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
ARHGEF1-221ENST00000600387 PLEKHH1Q9ULM0 1364 aa24.28■■□□□ 1.48
ARHGEF1-221ENST00000600387 ZNF521Q96K83 1311 aa24.28■■□□□ 1.48
ARHGEF1-221ENST00000600387 WDR43Q15061 677 aaKnown RBP eCLIP24.28■■□□□ 1.48
ARHGEF1-221ENST00000600387 GOLGA2Q08379 1002 aa24.27■■□□□ 1.48
ARHGEF1-221ENST00000600387 EIF3AQ14152 1382 aaKnown RBP24.26■■□□□ 1.47
ARHGEF1-221ENST00000600387 ATP10AO60312 1499 aa24.24■■□□□ 1.47
ARHGEF1-221ENST00000600387 PPP2R1AP30153 589 aa24.24■■□□□ 1.47
ARHGEF1-221ENST00000600387 WDR7Q9Y4E6 1490 aa24.24■■□□□ 1.47
ARHGEF1-221ENST00000600387 KNSTRNQ9Y448 316 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms