RNA–Protein interactions for RNA: ENST00000599188.5

PDE4C-214, Transcript of phosphodiesterase 4C, humanhuman

TSL 5

Gene PDE4C, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-214ENST00000599188 FAM135AQ9P2D6 1515 aa17.02■□□□□ 0.32
PDE4C-214ENST00000599188 USP47Q96K76 1375 aa17.01■□□□□ 0.31
PDE4C-214ENST00000599188 FANCAO15360 1455 aa17.01■□□□□ 0.31
PDE4C-214ENST00000599188 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
PDE4C-214ENST00000599188 PRKRIP1Q9H875 184 aaPredicted RBP17■□□□□ 0.31
PDE4C-214ENST00000599188 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
PDE4C-214ENST00000599188 KDM5CP41229 1560 aa17■□□□□ 0.31
PDE4C-214ENST00000599188 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
PDE4C-214ENST00000599188 UNC13BO14795 1591 aa16.97■□□□□ 0.31
PDE4C-214ENST00000599188 NEO1Q92859 1461 aa16.97■□□□□ 0.31
PDE4C-214ENST00000599188 HNRNPUQ00839 825 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDE4C-214ENST00000599188 FKBP8Q14318 412 aa16.97■□□□□ 0.31
PDE4C-214ENST00000599188 ARAP3Q8WWN8 1544 aa16.97■□□□□ 0.31
PDE4C-214ENST00000599188 PLCH2O75038 1416 aa16.96■□□□□ 0.31
PDE4C-214ENST00000599188 BCORL1Q5H9F3 1711 aa16.96■□□□□ 0.31
PDE4C-214ENST00000599188 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.3
PDE4C-214ENST00000599188 CCDC184Q52MB2 194 aa16.95■□□□□ 0.3
PDE4C-214ENST00000599188 ARID4BQ4LE39 1312 aaPredicted RBP16.93■□□□□ 0.3
PDE4C-214ENST00000599188 FRMPD1Q5SYB0 1578 aa16.93■□□□□ 0.3
PDE4C-214ENST00000599188 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
PDE4C-214ENST00000599188 NEFLP07196 543 aa16.93■□□□□ 0.3
PDE4C-214ENST00000599188 DCAF11Q8TEB1 546 aa16.93■□□□□ 0.3
PDE4C-214ENST00000599188 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
PDE4C-214ENST00000599188 KDM2AQ9Y2K7 1162 aa16.93■□□□□ 0.3
PDE4C-214ENST00000599188 ADGRL1O94910 1474 aa16.92■□□□□ 0.3
PDE4C-214ENST00000599188 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
PDE4C-214ENST00000599188 KDM4FA0A1W2PPD8 638 aa16.92■□□□□ 0.3
PDE4C-214ENST00000599188 CFAP74Q9C0B2 1584 aa16.92■□□□□ 0.3
PDE4C-214ENST00000599188 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
PDE4C-214ENST00000599188 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
PDE4C-214ENST00000599188 IQGAP3Q86VI3 1631 aa16.91■□□□□ 0.3
PDE4C-214ENST00000599188 RICTORQ6R327 1708 aa16.91■□□□□ 0.3
PDE4C-214ENST00000599188 DHX29Q7Z478 1369 aaKnown RBP16.9■□□□□ 0.3
PDE4C-214ENST00000599188 BCANQ96GW7 911 aa16.9■□□□□ 0.3
PDE4C-214ENST00000599188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDE4C-214ENST00000599188 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
PDE4C-214ENST00000599188 ABCC1P33527 1531 aa16.9■□□□□ 0.3
PDE4C-214ENST00000599188 ERBINQ96RT1 1412 aa16.89■□□□□ 0.3
PDE4C-214ENST00000599188 PLA2R1Q13018 1463 aa16.89■□□□□ 0.29
PDE4C-214ENST00000599188 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
PDE4C-214ENST00000599188 POLR3GLQ9BT43 218 aa16.88■□□□□ 0.29
PDE4C-214ENST00000599188 AFAP1Q8N556 730 aa16.87■□□□□ 0.29
PDE4C-214ENST00000599188 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
PDE4C-214ENST00000599188 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
PDE4C-214ENST00000599188 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
PDE4C-214ENST00000599188 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
PDE4C-214ENST00000599188 PRAG1Q86YV5 1406 aa16.86■□□□□ 0.29
PDE4C-214ENST00000599188 ST20-MTHFSA0A0A6YYL1 179 aa16.85■□□□□ 0.29
PDE4C-214ENST00000599188 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
PDE4C-214ENST00000599188 YEATS2Q9ULM3 1422 aa16.84■□□□□ 0.29
PDE4C-214ENST00000599188 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.29
PDE4C-214ENST00000599188 ATP10AO60312 1499 aa16.83■□□□□ 0.28
PDE4C-214ENST00000599188 A2MP01023 1474 aa16.82■□□□□ 0.28
PDE4C-214ENST00000599188 RGL3Q3MIN7 710 aa16.82■□□□□ 0.28
PDE4C-214ENST00000599188 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
PDE4C-214ENST00000599188 SPAG9O60271 1321 aaKnown RBP16.8■□□□□ 0.28
PDE4C-214ENST00000599188 ZBED9Q6R2W3 1325 aa16.8■□□□□ 0.28
PDE4C-214ENST00000599188 ZFYVE16Q7Z3T8 1539 aa16.79■□□□□ 0.28
PDE4C-214ENST00000599188 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
PDE4C-214ENST00000599188 SIGLEC1Q9BZZ2 1709 aa16.78■□□□□ 0.28
PDE4C-214ENST00000599188 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
PDE4C-214ENST00000599188 ARHGEF40Q8TER5 1519 aa16.78■□□□□ 0.28
PDE4C-214ENST00000599188 CNGB1Q14028 1251 aaPredicted RBP16.78■□□□□ 0.28
PDE4C-214ENST00000599188 MLECQ14165 292 aa16.78■□□□□ 0.28
PDE4C-214ENST00000599188 ZNF518AQ6AHZ1 1483 aa16.77■□□□□ 0.27
PDE4C-214ENST00000599188 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
PDE4C-214ENST00000599188 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
PDE4C-214ENST00000599188 LAMC1P11047 1609 aa16.76■□□□□ 0.27
PDE4C-214ENST00000599188 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
PDE4C-214ENST00000599188 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
PDE4C-214ENST00000599188 E9PCH4 1651 aa16.75■□□□□ 0.27
PDE4C-214ENST00000599188 PRDM15P57071 1507 aaPredicted RBP16.73■□□□□ 0.27
PDE4C-214ENST00000599188 HECW2Q9P2P5 1572 aa16.72■□□□□ 0.27
PDE4C-214ENST00000599188 INO80Q9ULG1 1556 aaPredicted RBP16.72■□□□□ 0.27
PDE4C-214ENST00000599188 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
PDE4C-214ENST00000599188 ATP7AQ04656 1500 aa16.71■□□□□ 0.27
PDE4C-214ENST00000599188 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
PDE4C-214ENST00000599188 TRPM2O94759 1503 aa16.7■□□□□ 0.26
PDE4C-214ENST00000599188 ABCA6Q8N139 1617 aa16.69■□□□□ 0.26
PDE4C-214ENST00000599188 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
PDE4C-214ENST00000599188 IRX6P78412 446 aaPredicted RBP16.69■□□□□ 0.26
PDE4C-214ENST00000599188 RALBP1Q15311 655 aa16.69■□□□□ 0.26
PDE4C-214ENST00000599188 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
PDE4C-214ENST00000599188 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
PDE4C-214ENST00000599188 PTPRTO14522 1441 aa16.68■□□□□ 0.26
PDE4C-214ENST00000599188 DIP2CQ9Y2E4 1556 aa16.68■□□□□ 0.26
PDE4C-214ENST00000599188 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
PDE4C-214ENST00000599188 MYBBP1AQ9BQG0 1328 aaKnown RBP16.67■□□□□ 0.26
PDE4C-214ENST00000599188 TESK2Q96S53 571 aa16.67■□□□□ 0.26
PDE4C-214ENST00000599188 MADDQ8WXG6 1647 aa16.67■□□□□ 0.26
PDE4C-214ENST00000599188 ERICH6BQ5W0A0 696 aa16.66■□□□□ 0.26
PDE4C-214ENST00000599188 SPHKAPQ2M3C7 1700 aa16.66■□□□□ 0.26
PDE4C-214ENST00000599188 TET3O43151 1660 aa16.66■□□□□ 0.26
PDE4C-214ENST00000599188 MLH3Q9UHC1 1453 aa16.66■□□□□ 0.26
PDE4C-214ENST00000599188 BRD4O60885 1362 aaPredicted RBP16.66■□□□□ 0.26
PDE4C-214ENST00000599188 DISP3Q9P2K9 1392 aa16.66■□□□□ 0.26
PDE4C-214ENST00000599188 ADAMTSL3P82987 1691 aa16.66■□□□□ 0.26
PDE4C-214ENST00000599188 VWDEQ8N2E2 1590 aa16.66■□□□□ 0.26
PDE4C-214ENST00000599188 KANK1Q14678 1352 aa16.65■□□□□ 0.26
PDE4C-214ENST00000599188 CEP152O94986 1710 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms