RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 KIF3BO15066 747 aa24.12■■□□□ 1.45
SPTBN4-213ENST00000598775 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
SPTBN4-213ENST00000598775 MYOM3Q5VTT5 1437 aa24.11■■□□□ 1.45
SPTBN4-213ENST00000598775 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
SPTBN4-213ENST00000598775 PZPP20742 1482 aa24.07■■□□□ 1.44
SPTBN4-213ENST00000598775 LTBP4Q8N2S1 1624 aa24.07■■□□□ 1.44
SPTBN4-213ENST00000598775 PKD2Q13563 968 aa24.07■■□□□ 1.44
SPTBN4-213ENST00000598775 TCOF1Q13428 1488 aaKnown RBP24.07■■□□□ 1.44
SPTBN4-213ENST00000598775 A2ML1A8K2U0 1454 aa24.06■■□□□ 1.44
SPTBN4-213ENST00000598775 RNF17Q9BXT8 1623 aaKnown RBP24.04■■□□□ 1.44
SPTBN4-213ENST00000598775 IQSEC2Q5JU85 1478 aa24.04■■□□□ 1.44
SPTBN4-213ENST00000598775 WASHC2CQ9Y4E1 1318 aa24.04■■□□□ 1.44
SPTBN4-213ENST00000598775 EIF2AK4Q9P2K8 1649 aaKnown RBP24.02■■□□□ 1.44
SPTBN4-213ENST00000598775 DNMT1P26358 1616 aaKnown RBP24.02■■□□□ 1.44
SPTBN4-213ENST00000598775 TNRQ92752 1358 aa24.01■■□□□ 1.43
SPTBN4-213ENST00000598775 NCKAP5LQ9HCH0 1330 aa24■■□□□ 1.43
SPTBN4-213ENST00000598775 ZC3H13Q5T200 1668 aaKnown RBP23.99■■□□□ 1.43
SPTBN4-213ENST00000598775 FBXO31Q5XUX0 539 aaPredicted RBP23.98■■□□□ 1.43
SPTBN4-213ENST00000598775 APLP2Q06481 763 aa23.97■■□□□ 1.43
SPTBN4-213ENST00000598775 SHANK2Q9UPX8 1470 aa23.97■■□□□ 1.43
SPTBN4-213ENST00000598775 DUOX2Q9NRD8 1548 aa23.96■■□□□ 1.43
SPTBN4-213ENST00000598775 NLRP1Q9C000 1473 aa23.95■■□□□ 1.42
SPTBN4-213ENST00000598775 ABCC3O15438 1527 aa23.94■■□□□ 1.42
SPTBN4-213ENST00000598775 MROH1Q8NDA8 1641 aa23.93■■□□□ 1.42
SPTBN4-213ENST00000598775 PTPN23Q9H3S7 1636 aa23.93■■□□□ 1.42
SPTBN4-213ENST00000598775 ABCC5O15440 1437 aa23.93■■□□□ 1.42
SPTBN4-213ENST00000598775 CROCC2H7BZ55 1655 aa23.92■■□□□ 1.42
SPTBN4-213ENST00000598775 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
SPTBN4-213ENST00000598775 SPATA31D1Q6ZQQ2 1576 aa23.91■■□□□ 1.42
SPTBN4-213ENST00000598775 ERBINQ96RT1 1412 aa23.89■■□□□ 1.41
SPTBN4-213ENST00000598775 POLR1AO95602 1720 aaPredicted RBP23.89■■□□□ 1.41
SPTBN4-213ENST00000598775 ZNF335Q9H4Z2 1342 aaPredicted RBP23.88■■□□□ 1.41
SPTBN4-213ENST00000598775 THEMISQ8N1K5 641 aaPredicted RBP23.88■■□□□ 1.41
SPTBN4-213ENST00000598775 KIF15Q9NS87 1388 aa23.88■■□□□ 1.41
SPTBN4-213ENST00000598775 NEURL4Q96JN8 1562 aa23.87■■□□□ 1.41
SPTBN4-213ENST00000598775 DAPK1P53355 1430 aa23.87■■□□□ 1.41
SPTBN4-213ENST00000598775 UGGT1Q9NYU2 1555 aa23.86■■□□□ 1.41
SPTBN4-213ENST00000598775 PRDM15P57071 1507 aaPredicted RBP23.86■■□□□ 1.41
SPTBN4-213ENST00000598775 ERVK-7P63135 1459 aa23.85■■□□□ 1.41
SPTBN4-213ENST00000598775 ARHGAP31Q2M1Z3 1444 aa23.84■■□□□ 1.41
SPTBN4-213ENST00000598775 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
SPTBN4-213ENST00000598775 MED14O60244 1454 aa23.84■■□□□ 1.41
SPTBN4-213ENST00000598775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.83■■□□□ 1.41
SPTBN4-213ENST00000598775 ANKLE2Q86XL3 938 aa23.83■■□□□ 1.41
SPTBN4-213ENST00000598775 CEP152O94986 1710 aa23.82■■□□□ 1.4
SPTBN4-213ENST00000598775 RRP7BPQ9NSQ0 103 aa23.8■■□□□ 1.4
SPTBN4-213ENST00000598775 ANKRD30AQ9BXX3 1397 aa23.78■■□□□ 1.4
SPTBN4-213ENST00000598775 CPS1P31327 1500 aa23.77■■□□□ 1.4
SPTBN4-213ENST00000598775 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
SPTBN4-213ENST00000598775 NPHP4O75161 1426 aaPredicted RBP23.75■■□□□ 1.39
SPTBN4-213ENST00000598775 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
SPTBN4-213ENST00000598775 VWDEQ8N2E2 1590 aa23.74■■□□□ 1.39
SPTBN4-213ENST00000598775 UBR1Q8IWV7 1749 aa23.73■■□□□ 1.39
SPTBN4-213ENST00000598775 KANK1Q14678 1352 aa23.72■■□□□ 1.39
SPTBN4-213ENST00000598775 CFAP65Q6ZU64 1925 aaKnown RBP23.71■■□□□ 1.39
SPTBN4-213ENST00000598775 IQGAP1P46940 1657 aa23.71■■□□□ 1.39
SPTBN4-213ENST00000598775 UBAP1LF5GYI3 381 aa23.69■■□□□ 1.38
SPTBN4-213ENST00000598775 SLIT1O75093 1534 aa23.69■■□□□ 1.38
SPTBN4-213ENST00000598775 ARHGAP23Q9P227 1491 aa23.68■■□□□ 1.38
SPTBN4-213ENST00000598775 CHIC2Q9UKJ5 165 aa23.68■■□□□ 1.38
SPTBN4-213ENST00000598775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.66■■□□□ 1.38
SPTBN4-213ENST00000598775 KDM5AP29375 1690 aaKnown RBP23.66■■□□□ 1.38
SPTBN4-213ENST00000598775 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
SPTBN4-213ENST00000598775 EFCAB6Q5THR3 1501 aa23.62■■□□□ 1.37
SPTBN4-213ENST00000598775 NOS1P29475 1434 aa23.61■■□□□ 1.37
SPTBN4-213ENST00000598775 ANKRD50Q9ULJ7 1429 aa23.61■■□□□ 1.37
SPTBN4-213ENST00000598775 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
SPTBN4-213ENST00000598775 PIK3C2BO00750 1634 aa23.61■■□□□ 1.37
SPTBN4-213ENST00000598775 TOM1O60784 492 aa23.6■■□□□ 1.37
SPTBN4-213ENST00000598775 LTKP29376 864 aa23.59■■□□□ 1.37
SPTBN4-213ENST00000598775 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
SPTBN4-213ENST00000598775 RPRD2Q5VT52 1461 aaKnown RBP23.59■■□□□ 1.37
SPTBN4-213ENST00000598775 TMEM2Q9UHN6 1383 aa23.58■■□□□ 1.37
SPTBN4-213ENST00000598775 TXNDC2Q86VQ3 553 aa23.58■■□□□ 1.37
SPTBN4-213ENST00000598775 STRCP1A6NGW2 1772 aa23.57■■□□□ 1.36
SPTBN4-213ENST00000598775 SYNMO15061 1565 aa23.57■■□□□ 1.36
SPTBN4-213ENST00000598775 IDI1Q13907 227 aa23.56■■□□□ 1.36
SPTBN4-213ENST00000598775 EID1Q9Y6B2 187 aa23.56■■□□□ 1.36
SPTBN4-213ENST00000598775 ROCK1Q13464 1354 aa23.55■■□□□ 1.36
SPTBN4-213ENST00000598775 LRRC7Q96NW7 1537 aa23.55■■□□□ 1.36
SPTBN4-213ENST00000598775 SLC52A1Q9NWF4 448 aa23.54■■□□□ 1.36
SPTBN4-213ENST00000598775 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
SPTBN4-213ENST00000598775 TET3O43151 1660 aa23.51■■□□□ 1.35
SPTBN4-213ENST00000598775 UNC13BO14795 1591 aa23.51■■□□□ 1.35
SPTBN4-213ENST00000598775 ADGRB3O60242 1522 aa23.5■■□□□ 1.35
SPTBN4-213ENST00000598775 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
SPTBN4-213ENST00000598775 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
SPTBN4-213ENST00000598775 PIP4K2BP78356 416 aa23.46■■□□□ 1.35
SPTBN4-213ENST00000598775 HSPA1LP34931 641 aa23.45■■□□□ 1.34
SPTBN4-213ENST00000598775 ILDR2Q71H61 639 aa23.45■■□□□ 1.34
SPTBN4-213ENST00000598775 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
SPTBN4-213ENST00000598775 IQGAP3Q86VI3 1631 aa23.41■■□□□ 1.34
SPTBN4-213ENST00000598775 XIRP1Q702N8 1843 aaKnown RBP23.4■■□□□ 1.34
SPTBN4-213ENST00000598775 ZFYVE9O95405 1425 aa23.4■■□□□ 1.34
SPTBN4-213ENST00000598775 E9PCH4 1651 aa23.38■■□□□ 1.33
SPTBN4-213ENST00000598775 TMEM131LA2VDJ0 1609 aa23.38■■□□□ 1.33
SPTBN4-213ENST00000598775 KCNA6P17658 529 aa23.38■■□□□ 1.33
SPTBN4-213ENST00000598775 SOCS7O14512 581 aa23.36■■□□□ 1.33
SPTBN4-213ENST00000598775 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
SPTBN4-213ENST00000598775 NWD1Q149M9 1564 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms