RNA–Protein interactions for RNA: ENST00000598362.1

GRAMD1A-208, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-208ENST00000598362 CAMSAP1Q5T5Y3 1602 aa11.61□□□□□ -0.55
GRAMD1A-208ENST00000598362 HSPA1LP34931 641 aa11.61□□□□□ -0.55
GRAMD1A-208ENST00000598362 SHANK2Q9UPX8 1470 aa11.61□□□□□ -0.55
GRAMD1A-208ENST00000598362 PHF23Q9BUL5 403 aaPredicted RBP11.6□□□□□ -0.55
GRAMD1A-208ENST00000598362 DAPK1P53355 1430 aa11.6□□□□□ -0.55
GRAMD1A-208ENST00000598362 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
GRAMD1A-208ENST00000598362 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
GRAMD1A-208ENST00000598362 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
GRAMD1A-208ENST00000598362 ABCC5O15440 1437 aa11.59□□□□□ -0.55
GRAMD1A-208ENST00000598362 RRBP1Q9P2E9 1410 aaKnown RBP11.59□□□□□ -0.55
GRAMD1A-208ENST00000598362 PLXNC1O60486 1568 aa11.58□□□□□ -0.55
GRAMD1A-208ENST00000598362 PIP4K2BP78356 416 aa11.58□□□□□ -0.56
GRAMD1A-208ENST00000598362 RTEL1-TNFRSF6BF6WH68 1400 aa11.58□□□□□ -0.56
GRAMD1A-208ENST00000598362 ADGBQ8N7X0 1667 aa11.58□□□□□ -0.56
GRAMD1A-208ENST00000598362 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
GRAMD1A-208ENST00000598362 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
GRAMD1A-208ENST00000598362 FAM50AQ14320 339 aaKnown RBP11.55□□□□□ -0.56
GRAMD1A-208ENST00000598362 A2MP01023 1474 aa11.55□□□□□ -0.56
GRAMD1A-208ENST00000598362 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.54□□□□□ -0.56
GRAMD1A-208ENST00000598362 MED1Q15648 1581 aaPredicted RBP11.54□□□□□ -0.56
GRAMD1A-208ENST00000598362 ADGRL2O95490 1459 aa11.53□□□□□ -0.56
GRAMD1A-208ENST00000598362 MROH2AA6NES4 1674 aa11.52□□□□□ -0.56
GRAMD1A-208ENST00000598362 TSPY4P0CV99 314 aa11.52□□□□□ -0.57
GRAMD1A-208ENST00000598362 TSPY10P0CW01 314 aa11.52□□□□□ -0.57
GRAMD1A-208ENST00000598362 PTPRKQ15262 1439 aa11.52□□□□□ -0.57
GRAMD1A-208ENST00000598362 GGT6Q6P531 493 aa11.51□□□□□ -0.57
GRAMD1A-208ENST00000598362 CPS1P31327 1500 aa11.5□□□□□ -0.57
GRAMD1A-208ENST00000598362 DUOX2Q9NRD8 1548 aa11.5□□□□□ -0.57
GRAMD1A-208ENST00000598362 EIF2AK4Q9P2K8 1649 aaKnown RBP11.5□□□□□ -0.57
GRAMD1A-208ENST00000598362 KIF15Q9NS87 1388 aa11.5□□□□□ -0.57
GRAMD1A-208ENST00000598362 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
GRAMD1A-208ENST00000598362 DHX29Q7Z478 1369 aaKnown RBP11.49□□□□□ -0.57
GRAMD1A-208ENST00000598362 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
GRAMD1A-208ENST00000598362 ERBINQ96RT1 1412 aa11.48□□□□□ -0.57
GRAMD1A-208ENST00000598362 CEP170BQ9Y4F5 1589 aaPredicted RBP11.48□□□□□ -0.57
GRAMD1A-208ENST00000598362 ZNF142P52746 1687 aaPredicted RBP11.47□□□□□ -0.57
GRAMD1A-208ENST00000598362 RNF17Q9BXT8 1623 aaKnown RBP11.47□□□□□ -0.57
GRAMD1A-208ENST00000598362 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
GRAMD1A-208ENST00000598362 THEMISQ8N1K5 641 aaPredicted RBP11.47□□□□□ -0.57
GRAMD1A-208ENST00000598362 ROCK1Q13464 1354 aa11.46□□□□□ -0.57
GRAMD1A-208ENST00000598362 CHIC2Q9UKJ5 165 aa11.46□□□□□ -0.57
GRAMD1A-208ENST00000598362 ITGAEP38570 1179 aa11.45□□□□□ -0.58
GRAMD1A-208ENST00000598362 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
GRAMD1A-208ENST00000598362 MROH1Q8NDA8 1641 aa11.45□□□□□ -0.58
GRAMD1A-208ENST00000598362 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
GRAMD1A-208ENST00000598362 DEPDC5O75140 1603 aa11.44□□□□□ -0.58
GRAMD1A-208ENST00000598362 PRDM15P57071 1507 aaPredicted RBP11.44□□□□□ -0.58
GRAMD1A-208ENST00000598362 FAM135AQ9P2D6 1515 aa11.44□□□□□ -0.58
GRAMD1A-208ENST00000598362 CLTCQ00610 1675 aaKnown RBP11.43□□□□□ -0.58
GRAMD1A-208ENST00000598362 RRP7BPQ9NSQ0 103 aa11.43□□□□□ -0.58
GRAMD1A-208ENST00000598362 KDM5DQ9BY66 1539 aa11.42□□□□□ -0.58
GRAMD1A-208ENST00000598362 ZC3H13Q5T200 1668 aaKnown RBP11.42□□□□□ -0.58
GRAMD1A-208ENST00000598362 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
GRAMD1A-208ENST00000598362 RGS17Q9UGC6 210 aaPredicted RBP11.41□□□□□ -0.58
GRAMD1A-208ENST00000598362 UNC13BO14795 1591 aa11.41□□□□□ -0.58
GRAMD1A-208ENST00000598362 TNRQ92752 1358 aa11.41□□□□□ -0.58
GRAMD1A-208ENST00000598362 ABCC3O15438 1527 aa11.4□□□□□ -0.58
GRAMD1A-208ENST00000598362 KIF3BO15066 747 aa11.4□□□□□ -0.58
GRAMD1A-208ENST00000598362 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
GRAMD1A-208ENST00000598362 HFM1A2PYH4 1435 aa11.39□□□□□ -0.59
GRAMD1A-208ENST00000598362 CEP152O94986 1710 aa11.38□□□□□ -0.59
GRAMD1A-208ENST00000598362 VWDEQ8N2E2 1590 aa11.38□□□□□ -0.59
GRAMD1A-208ENST00000598362 NAIPQ13075 1403 aa11.38□□□□□ -0.59
GRAMD1A-208ENST00000598362 SENP3Q9H4L4 574 aaPredicted RBP11.38□□□□□ -0.59
GRAMD1A-208ENST00000598362 MED14O60244 1454 aa11.38□□□□□ -0.59
GRAMD1A-208ENST00000598362 WASHC2CQ9Y4E1 1318 aa11.37□□□□□ -0.59
GRAMD1A-208ENST00000598362 NPHP4O75161 1426 aaPredicted RBP11.37□□□□□ -0.59
GRAMD1A-208ENST00000598362 LMTK2Q8IWU2 1503 aa11.36□□□□□ -0.59
GRAMD1A-208ENST00000598362 NEURL4Q96JN8 1562 aa11.36□□□□□ -0.59
GRAMD1A-208ENST00000598362 POLR1AO95602 1720 aaPredicted RBP11.35□□□□□ -0.59
GRAMD1A-208ENST00000598362 NLRP1Q9C000 1473 aa11.35□□□□□ -0.59
GRAMD1A-208ENST00000598362 IQGAP3Q86VI3 1631 aa11.35□□□□□ -0.59
GRAMD1A-208ENST00000598362 ALKQ9UM73 1620 aa11.35□□□□□ -0.59
GRAMD1A-208ENST00000598362 PZPP20742 1482 aa11.34□□□□□ -0.59
GRAMD1A-208ENST00000598362 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
GRAMD1A-208ENST00000598362 LRRC7Q96NW7 1537 aa11.34□□□□□ -0.59
GRAMD1A-208ENST00000598362 KANK1Q14678 1352 aa11.33□□□□□ -0.6
GRAMD1A-208ENST00000598362 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
GRAMD1A-208ENST00000598362 TET3O43151 1660 aa11.33□□□□□ -0.6
GRAMD1A-208ENST00000598362 UGGT1Q9NYU2 1555 aa11.33□□□□□ -0.6
GRAMD1A-208ENST00000598362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.6
GRAMD1A-208ENST00000598362 FAM135BQ49AJ0 1406 aa11.3□□□□□ -0.6
GRAMD1A-208ENST00000598362 ERVK-7P63135 1459 aa11.3□□□□□ -0.6
GRAMD1A-208ENST00000598362 ARHGAP31Q2M1Z3 1444 aa11.29□□□□□ -0.6
GRAMD1A-208ENST00000598362 SETD5Q9C0A6 1442 aa11.29□□□□□ -0.6
GRAMD1A-208ENST00000598362 NUP155O75694 1391 aa11.28□□□□□ -0.6
GRAMD1A-208ENST00000598362 IQGAP1P46940 1657 aa11.27□□□□□ -0.6
GRAMD1A-208ENST00000598362 RAB3GAP2Q9H2M9 1393 aa11.27□□□□□ -0.61
GRAMD1A-208ENST00000598362 E9PCH4 1651 aa11.27□□□□□ -0.61
GRAMD1A-208ENST00000598362 RPRD2Q5VT52 1461 aaKnown RBP11.26□□□□□ -0.61
GRAMD1A-208ENST00000598362 SYNMO15061 1565 aa11.26□□□□□ -0.61
GRAMD1A-208ENST00000598362 TXNDC2Q86VQ3 553 aa11.26□□□□□ -0.61
GRAMD1A-208ENST00000598362 EID1Q9Y6B2 187 aa11.26□□□□□ -0.61
GRAMD1A-208ENST00000598362 NOS1P29475 1434 aa11.24□□□□□ -0.61
GRAMD1A-208ENST00000598362 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
GRAMD1A-208ENST00000598362 LTKP29376 864 aa11.23□□□□□ -0.61
GRAMD1A-208ENST00000598362 TRIM26Q12899 539 aaPredicted RBP11.22□□□□□ -0.61
GRAMD1A-208ENST00000598362 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
GRAMD1A-208ENST00000598362 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
GRAMD1A-208ENST00000598362 TRIM52Q96A61 297 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms