RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 FBXO31Q5XUX0 539 aaPredicted RBP16.7■□□□□ 0.26
LSM4-205ENST00000597776 A2ML1A8K2U0 1454 aa16.69■□□□□ 0.26
LSM4-205ENST00000597776 TSPY4P0CV99 314 aa16.69■□□□□ 0.26
LSM4-205ENST00000597776 TSPY10P0CW01 314 aa16.69■□□□□ 0.26
LSM4-205ENST00000597776 ZNF335Q9H4Z2 1342 aaPredicted RBP16.69■□□□□ 0.26
LSM4-205ENST00000597776 PZPP20742 1482 aa16.68■□□□□ 0.26
LSM4-205ENST00000597776 TNRQ92752 1358 aa16.68■□□□□ 0.26
LSM4-205ENST00000597776 MAP3K1Q13233 1512 aa16.68■□□□□ 0.26
LSM4-205ENST00000597776 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
LSM4-205ENST00000597776 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
LSM4-205ENST00000597776 FAM135AQ9P2D6 1515 aa16.67■□□□□ 0.26
LSM4-205ENST00000597776 PKD2Q13563 968 aa16.67■□□□□ 0.26
LSM4-205ENST00000597776 MYOM3Q5VTT5 1437 aa16.66■□□□□ 0.26
LSM4-205ENST00000597776 MAST1Q9Y2H9 1570 aa16.66■□□□□ 0.26
LSM4-205ENST00000597776 IQSEC2Q5JU85 1478 aa16.65■□□□□ 0.26
LSM4-205ENST00000597776 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
LSM4-205ENST00000597776 MIA2Q96PC5 1412 aa16.63■□□□□ 0.25
LSM4-205ENST00000597776 ABCC3O15438 1527 aa16.61■□□□□ 0.25
LSM4-205ENST00000597776 NEURL4Q96JN8 1562 aa16.6■□□□□ 0.25
LSM4-205ENST00000597776 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
LSM4-205ENST00000597776 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
LSM4-205ENST00000597776 EIF2AK4Q9P2K8 1649 aaKnown RBP16.59■□□□□ 0.25
LSM4-205ENST00000597776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.59■□□□□ 0.253e-6■■■■■ 41.5
LSM4-205ENST00000597776 NLRP1Q9C000 1473 aa16.58■□□□□ 0.24
LSM4-205ENST00000597776 ZC3H13Q5T200 1668 aaKnown RBP16.58■□□□□ 0.24
LSM4-205ENST00000597776 UGGT1Q9NYU2 1555 aa16.57■□□□□ 0.24
LSM4-205ENST00000597776 DUOX2Q9NRD8 1548 aa16.56■□□□□ 0.24
LSM4-205ENST00000597776 ABCC5O15440 1437 aa16.56■□□□□ 0.24
LSM4-205ENST00000597776 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
LSM4-205ENST00000597776 UBAP1LF5GYI3 381 aa16.56■□□□□ 0.24
LSM4-205ENST00000597776 CEP152O94986 1710 aa16.56■□□□□ 0.24
LSM4-205ENST00000597776 CROCC2H7BZ55 1655 aa16.56■□□□□ 0.24
LSM4-205ENST00000597776 PTPN23Q9H3S7 1636 aa16.56■□□□□ 0.24
LSM4-205ENST00000597776 SPATA31D1Q6ZQQ2 1576 aa16.55■□□□□ 0.24
LSM4-205ENST00000597776 KIF15Q9NS87 1388 aa16.55■□□□□ 0.24
LSM4-205ENST00000597776 APLP2Q06481 763 aa16.55■□□□□ 0.24
LSM4-205ENST00000597776 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
LSM4-205ENST00000597776 ERVK-7P63135 1459 aa16.54■□□□□ 0.24
LSM4-205ENST00000597776 ANKLE2Q86XL3 938 aa16.54■□□□□ 0.24
LSM4-205ENST00000597776 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
LSM4-205ENST00000597776 RRP7BPQ9NSQ0 103 aa16.53■□□□□ 0.24
LSM4-205ENST00000597776 DAPK1P53355 1430 aa16.52■□□□□ 0.23
LSM4-205ENST00000597776 FGD6Q6ZV73 1430 aa16.52■□□□□ 0.23
LSM4-205ENST00000597776 DEPDC5O75140 1603 aa16.51■□□□□ 0.23
LSM4-205ENST00000597776 NPHP4O75161 1426 aaPredicted RBP16.51■□□□□ 0.23
LSM4-205ENST00000597776 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
LSM4-205ENST00000597776 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
LSM4-205ENST00000597776 ILDR2Q71H61 639 aa16.5■□□□□ 0.23
LSM4-205ENST00000597776 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
LSM4-205ENST00000597776 CPS1P31327 1500 aa16.5■□□□□ 0.23
LSM4-205ENST00000597776 MED14O60244 1454 aa16.49■□□□□ 0.23
LSM4-205ENST00000597776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.232e-7■□□□□ 8
LSM4-205ENST00000597776 IQGAP1P46940 1657 aa16.48■□□□□ 0.23
LSM4-205ENST00000597776 CFAP65Q6ZU64 1925 aaKnown RBP16.47■□□□□ 0.23
LSM4-205ENST00000597776 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
LSM4-205ENST00000597776 UBR1Q8IWV7 1749 aa16.46■□□□□ 0.23
LSM4-205ENST00000597776 ARHGAP31Q2M1Z3 1444 aa16.45■□□□□ 0.22
LSM4-205ENST00000597776 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
LSM4-205ENST00000597776 PIP4K2BP78356 416 aa16.44■□□□□ 0.22
LSM4-205ENST00000597776 ANKRD30AQ9BXX3 1397 aa16.43■□□□□ 0.22
LSM4-205ENST00000597776 STRCP1A6NGW2 1772 aa16.42■□□□□ 0.22
LSM4-205ENST00000597776 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
LSM4-205ENST00000597776 KANK1Q14678 1352 aa16.41■□□□□ 0.22
LSM4-205ENST00000597776 TOM1O60784 492 aa16.4■□□□□ 0.22
LSM4-205ENST00000597776 LTKP29376 864 aa16.4■□□□□ 0.22
LSM4-205ENST00000597776 HSPA1LP34931 641 aa16.4■□□□□ 0.22
LSM4-205ENST00000597776 PIK3C2BO00750 1634 aa16.4■□□□□ 0.22
LSM4-205ENST00000597776 ARHGAP23Q9P227 1491 aa16.4■□□□□ 0.22
LSM4-205ENST00000597776 SLIT1O75093 1534 aa16.4■□□□□ 0.22
LSM4-205ENST00000597776 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
LSM4-205ENST00000597776 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
LSM4-205ENST00000597776 LMTK2Q8IWU2 1503 aa16.39■□□□□ 0.21
LSM4-205ENST00000597776 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
LSM4-205ENST00000597776 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
LSM4-205ENST00000597776 LRRC7Q96NW7 1537 aa16.38■□□□□ 0.21
LSM4-205ENST00000597776 SYNMO15061 1565 aa16.36■□□□□ 0.21
LSM4-205ENST00000597776 EFCAB6Q5THR3 1501 aa16.35■□□□□ 0.21
LSM4-205ENST00000597776 SOCS7O14512 581 aa16.35■□□□□ 0.21
LSM4-205ENST00000597776 TMEM2Q9UHN6 1383 aa16.35■□□□□ 0.21
LSM4-205ENST00000597776 IDI1Q13907 227 aa16.34■□□□□ 0.21
LSM4-205ENST00000597776 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
LSM4-205ENST00000597776 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
LSM4-205ENST00000597776 NOS1P29475 1434 aa16.32■□□□□ 0.2
LSM4-205ENST00000597776 SENP3Q9H4L4 574 aaPredicted RBP16.32■□□□□ 0.2
LSM4-205ENST00000597776 ANKRD50Q9ULJ7 1429 aa16.32■□□□□ 0.2
LSM4-205ENST00000597776 MED1Q15648 1581 aaPredicted RBP16.31■□□□□ 0.2
LSM4-205ENST00000597776 KDM5AP29375 1690 aaKnown RBP16.3■□□□□ 0.2
LSM4-205ENST00000597776 ADGRB3O60242 1522 aa16.3■□□□□ 0.2
LSM4-205ENST00000597776 XIRP1Q702N8 1843 aaKnown RBP16.27■□□□□ 0.2
LSM4-205ENST00000597776 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
LSM4-205ENST00000597776 RPRD2Q5VT52 1461 aaKnown RBP16.26■□□□□ 0.19
LSM4-205ENST00000597776 TET3O43151 1660 aa16.26■□□□□ 0.19
LSM4-205ENST00000597776 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
LSM4-205ENST00000597776 UNC13BO14795 1591 aa16.25■□□□□ 0.19
LSM4-205ENST00000597776 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
LSM4-205ENST00000597776 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
LSM4-205ENST00000597776 GCC2Q8IWJ2 1684 aa16.22■□□□□ 0.19
LSM4-205ENST00000597776 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
LSM4-205ENST00000597776 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
LSM4-205ENST00000597776 ZFYVE9O95405 1425 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms