RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
TGFB1-202ENST00000597453 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
TGFB1-202ENST00000597453 FAM135AQ9P2D6 1515 aa23.92■■□□□ 1.42
TGFB1-202ENST00000597453 LTBP4Q8N2S1 1624 aa23.92■■□□□ 1.42
TGFB1-202ENST00000597453 NCKAP5LQ9HCH0 1330 aa23.9■■□□□ 1.42
TGFB1-202ENST00000597453 PLA2R1Q13018 1463 aa23.89■■□□□ 1.42
TGFB1-202ENST00000597453 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
TGFB1-202ENST00000597453 PZPP20742 1482 aa23.88■■□□□ 1.41
TGFB1-202ENST00000597453 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
TGFB1-202ENST00000597453 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
TGFB1-202ENST00000597453 A2ML1A8K2U0 1454 aa23.87■■□□□ 1.41
TGFB1-202ENST00000597453 TCOF1Q13428 1488 aaKnown RBP23.87■■□□□ 1.41
TGFB1-202ENST00000597453 WASHC2CQ9Y4E1 1318 aa23.86■■□□□ 1.41
TGFB1-202ENST00000597453 EIF2AK4Q9P2K8 1649 aaKnown RBP23.85■■□□□ 1.41
TGFB1-202ENST00000597453 TNRQ92752 1358 aa23.85■■□□□ 1.41
TGFB1-202ENST00000597453 CROCC2H7BZ55 1655 aa23.84■■□□□ 1.41
TGFB1-202ENST00000597453 MROH1Q8NDA8 1641 aa23.83■■□□□ 1.41
TGFB1-202ENST00000597453 PTPN23Q9H3S7 1636 aa23.83■■□□□ 1.41
TGFB1-202ENST00000597453 ABCC3O15438 1527 aa23.82■■□□□ 1.4
TGFB1-202ENST00000597453 ZC3H13Q5T200 1668 aaKnown RBP23.82■■□□□ 1.4
TGFB1-202ENST00000597453 APLP2Q06481 763 aa23.81■■□□□ 1.4
TGFB1-202ENST00000597453 PKD2Q13563 968 aa23.81■■□□□ 1.4
TGFB1-202ENST00000597453 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
TGFB1-202ENST00000597453 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
TGFB1-202ENST00000597453 ABCC5O15440 1437 aa23.78■■□□□ 1.4
TGFB1-202ENST00000597453 CEP152O94986 1710 aa23.78■■□□□ 1.4
TGFB1-202ENST00000597453 ZNF335Q9H4Z2 1342 aaPredicted RBP23.78■■□□□ 1.4
TGFB1-202ENST00000597453 SHANK2Q9UPX8 1470 aa23.77■■□□□ 1.4
TGFB1-202ENST00000597453 IQSEC2Q5JU85 1478 aa23.76■■□□□ 1.39
TGFB1-202ENST00000597453 NEURL4Q96JN8 1562 aa23.76■■□□□ 1.39
TGFB1-202ENST00000597453 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
TGFB1-202ENST00000597453 KIF15Q9NS87 1388 aa23.74■■□□□ 1.39
TGFB1-202ENST00000597453 DAPK1P53355 1430 aa23.74■■□□□ 1.39
TGFB1-202ENST00000597453 NLRP1Q9C000 1473 aa23.74■■□□□ 1.39
TGFB1-202ENST00000597453 SPATA31D1Q6ZQQ2 1576 aa23.74■■□□□ 1.39
TGFB1-202ENST00000597453 CFAP65Q6ZU64 1925 aaKnown RBP23.72■■□□□ 1.39
TGFB1-202ENST00000597453 UGGT1Q9NYU2 1555 aa23.71■■□□□ 1.39
TGFB1-202ENST00000597453 PRDM15P57071 1507 aaPredicted RBP23.7■■□□□ 1.38
TGFB1-202ENST00000597453 ERVK-7P63135 1459 aa23.7■■□□□ 1.38
TGFB1-202ENST00000597453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.38
TGFB1-202ENST00000597453 ERBINQ96RT1 1412 aa23.69■■□□□ 1.38
TGFB1-202ENST00000597453 RRP7BPQ9NSQ0 103 aa23.69■■□□□ 1.38
TGFB1-202ENST00000597453 DEPDC5O75140 1603 aa23.67■■□□□ 1.38
TGFB1-202ENST00000597453 THEMISQ8N1K5 641 aaPredicted RBP23.65■■□□□ 1.38
TGFB1-202ENST00000597453 ANKLE2Q86XL3 938 aa23.62■■□□□ 1.37
TGFB1-202ENST00000597453 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
TGFB1-202ENST00000597453 UBR1Q8IWV7 1749 aa23.62■■□□□ 1.37
TGFB1-202ENST00000597453 MED14O60244 1454 aa23.61■■□□□ 1.37
TGFB1-202ENST00000597453 ARHGAP31Q2M1Z3 1444 aa23.6■■□□□ 1.37
TGFB1-202ENST00000597453 ANKRD30AQ9BXX3 1397 aa23.6■■□□□ 1.37
TGFB1-202ENST00000597453 VWDEQ8N2E2 1590 aa23.6■■□□□ 1.37
TGFB1-202ENST00000597453 IQGAP1P46940 1657 aa23.6■■□□□ 1.37
TGFB1-202ENST00000597453 NPHP4O75161 1426 aaPredicted RBP23.59■■□□□ 1.37
TGFB1-202ENST00000597453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.58■■□□□ 1.37
TGFB1-202ENST00000597453 ADGRL2O95490 1459 aa23.56■■□□□ 1.36
TGFB1-202ENST00000597453 CPS1P31327 1500 aa23.56■■□□□ 1.36
TGFB1-202ENST00000597453 UBAP1LF5GYI3 381 aa23.56■■□□□ 1.36
TGFB1-202ENST00000597453 FAM50AQ14320 339 aaKnown RBP23.54■■□□□ 1.36
TGFB1-202ENST00000597453 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
TGFB1-202ENST00000597453 KANK1Q14678 1352 aa23.52■■□□□ 1.36
TGFB1-202ENST00000597453 PIK3C2BO00750 1634 aa23.52■■□□□ 1.36
TGFB1-202ENST00000597453 STRCP1A6NGW2 1772 aa23.52■■□□□ 1.36
TGFB1-202ENST00000597453 ARHGAP23Q9P227 1491 aa23.49■■□□□ 1.35
TGFB1-202ENST00000597453 SLIT1O75093 1534 aa23.49■■□□□ 1.35
TGFB1-202ENST00000597453 EFCAB6Q5THR3 1501 aa23.49■■□□□ 1.35
TGFB1-202ENST00000597453 SCAF11Q99590 1463 aaKnown RBP23.48■■□□□ 1.35
TGFB1-202ENST00000597453 SYNMO15061 1565 aa23.48■■□□□ 1.35
TGFB1-202ENST00000597453 DISP3Q9P2K9 1392 aa23.47■■□□□ 1.35
TGFB1-202ENST00000597453 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
TGFB1-202ENST00000597453 LTKP29376 864 aa23.44■■□□□ 1.34
TGFB1-202ENST00000597453 KDM5AP29375 1690 aaKnown RBP23.44■■□□□ 1.34
TGFB1-202ENST00000597453 NOS1P29475 1434 aa23.42■■□□□ 1.34
TGFB1-202ENST00000597453 ALKQ9UM73 1620 aa23.41■■□□□ 1.34
TGFB1-202ENST00000597453 TXNDC2Q86VQ3 553 aa23.41■■□□□ 1.34
TGFB1-202ENST00000597453 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
TGFB1-202ENST00000597453 IDI1Q13907 227 aa23.4■■□□□ 1.34
TGFB1-202ENST00000597453 TMEM2Q9UHN6 1383 aa23.4■■□□□ 1.34
TGFB1-202ENST00000597453 TET3O43151 1660 aa23.38■■□□□ 1.33
TGFB1-202ENST00000597453 TOM1O60784 492 aa23.38■■□□□ 1.33
TGFB1-202ENST00000597453 PIP4K2BP78356 416 aa23.38■■□□□ 1.33
TGFB1-202ENST00000597453 UNC13BO14795 1591 aa23.38■■□□□ 1.33
TGFB1-202ENST00000597453 SCAF1Q9H7N4 1312 aaKnown RBP23.37■■□□□ 1.33
TGFB1-202ENST00000597453 STAG3Q9UJ98 1225 aa23.37■■□□□ 1.33
TGFB1-202ENST00000597453 ADGRB3O60242 1522 aa23.37■■□□□ 1.33
TGFB1-202ENST00000597453 ILDR2Q71H61 639 aa23.36■■□□□ 1.33
TGFB1-202ENST00000597453 EID1Q9Y6B2 187 aa23.36■■□□□ 1.33
TGFB1-202ENST00000597453 GCC2Q8IWJ2 1684 aa23.35■■□□□ 1.33
TGFB1-202ENST00000597453 RPRD2Q5VT52 1461 aaKnown RBP23.35■■□□□ 1.33
TGFB1-202ENST00000597453 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
TGFB1-202ENST00000597453 XIRP1Q702N8 1843 aaKnown RBP23.33■■□□□ 1.33
TGFB1-202ENST00000597453 ROCK1Q13464 1354 aa23.33■■□□□ 1.33
TGFB1-202ENST00000597453 HSPA1LP34931 641 aa23.33■■□□□ 1.33
TGFB1-202ENST00000597453 MYO5BQ9ULV0 1848 aa23.33■■□□□ 1.32
TGFB1-202ENST00000597453 E9PCH4 1651 aa23.29■■□□□ 1.32
TGFB1-202ENST00000597453 SLC52A1Q9NWF4 448 aa23.29■■□□□ 1.32
TGFB1-202ENST00000597453 IQGAP3Q86VI3 1631 aa23.28■■□□□ 1.32
TGFB1-202ENST00000597453 ITGAEP38570 1179 aa23.27■■□□□ 1.32
TGFB1-202ENST00000597453 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
TGFB1-202ENST00000597453 SLC26A8Q96RN1 970 aa23.23■■□□□ 1.31
TGFB1-202ENST00000597453 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms