RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 PKD2Q13563 968 aa33.25■■■□□ 2.91
SPTBN4-210ENST00000596900 FOXD1Q16676 465 aa33.24■■■□□ 2.91
SPTBN4-210ENST00000596900 DEPDC5O75140 1603 aa33.23■■■□□ 2.91
SPTBN4-210ENST00000596900 RAPGEF3O95398 923 aa33.22■■■□□ 2.91
SPTBN4-210ENST00000596900 A2MP01023 1474 aa33.2■■■□□ 2.91
SPTBN4-210ENST00000596900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.19■■■□□ 2.9
SPTBN4-210ENST00000596900 ABCA6Q8N139 1617 aa33.18■■■□□ 2.9
SPTBN4-210ENST00000596900 FRMPD1Q5SYB0 1578 aa33.17■■■□□ 2.9
SPTBN4-210ENST00000596900 RPRD2Q5VT52 1461 aaKnown RBP33.17■■■□□ 2.9
SPTBN4-210ENST00000596900 ZMYM4Q5VZL5 1548 aa33.17■■■□□ 2.9
SPTBN4-210ENST00000596900 KANK1Q14678 1352 aa33.13■■■□□ 2.89
SPTBN4-210ENST00000596900 DIP2CQ9Y2E4 1556 aa33.12■■■□□ 2.89
SPTBN4-210ENST00000596900 PRDM15P57071 1507 aaPredicted RBP33.12■■■□□ 2.89
SPTBN4-210ENST00000596900 KIF3BO15066 747 aa33.12■■■□□ 2.89
SPTBN4-210ENST00000596900 DNAJC5Q9H3Z4 198 aa33.11■■■□□ 2.89
SPTBN4-210ENST00000596900 BCORL1Q5H9F3 1711 aa33.1■■■□□ 2.89
SPTBN4-210ENST00000596900 RNF17Q9BXT8 1623 aaKnown RBP33.08■■■□□ 2.89
SPTBN4-210ENST00000596900 PPP1R15AO75807 674 aaPredicted RBP33.06■■■□□ 2.88
SPTBN4-210ENST00000596900 VWDEQ8N2E2 1590 aa33.06■■■□□ 2.88
SPTBN4-210ENST00000596900 MROH1Q8NDA8 1641 aa33.05■■■□□ 2.88
SPTBN4-210ENST00000596900 TET3O43151 1660 aa33.03■■■□□ 2.88
SPTBN4-210ENST00000596900 YEATS2Q9ULM3 1422 aa33■■■□□ 2.87
SPTBN4-210ENST00000596900 ZNF316A6NFI3 1004 aaPredicted RBP32.98■■■□□ 2.87
SPTBN4-210ENST00000596900 E9PCH4 1651 aa32.96■■■□□ 2.87
SPTBN4-210ENST00000596900 ATP10AO60312 1499 aa32.96■■■□□ 2.87
SPTBN4-210ENST00000596900 CCDC144AA2RUR9 1427 aa32.95■■■□□ 2.86
SPTBN4-210ENST00000596900 LMTK2Q8IWU2 1503 aa32.93■■■□□ 2.86
SPTBN4-210ENST00000596900 REREQ9P2R6 1566 aa32.92■■■□□ 2.86
SPTBN4-210ENST00000596900 L3MBTL2Q969R5 705 aa32.92■■■□□ 2.86
SPTBN4-210ENST00000596900 COL17A1Q9UMD9 1497 aaPredicted RBP32.89■■■□□ 2.86
SPTBN4-210ENST00000596900 CEP152O94986 1710 aa32.89■■■□□ 2.86
SPTBN4-210ENST00000596900 EFCAB6Q5THR3 1501 aa32.88■■■□□ 2.85
SPTBN4-210ENST00000596900 SPHKAPQ2M3C7 1700 aa32.88■■■□□ 2.85
SPTBN4-210ENST00000596900 PLA2R1Q13018 1463 aa32.88■■■□□ 2.85
SPTBN4-210ENST00000596900 GGT6Q6P531 493 aa32.86■■■□□ 2.85
SPTBN4-210ENST00000596900 TRHP20396 242 aaPredicted RBP32.86■■■□□ 2.85
SPTBN4-210ENST00000596900 ARHGEF40Q8TER5 1519 aa32.86■■■□□ 2.85
SPTBN4-210ENST00000596900 TRPM2O94759 1503 aa32.84■■■□□ 2.85
SPTBN4-210ENST00000596900 ZC3H13Q5T200 1668 aaKnown RBP32.83■■■□□ 2.85
SPTBN4-210ENST00000596900 AGLP35573 1532 aa32.81■■■□□ 2.84
SPTBN4-210ENST00000596900 PTPRTO14522 1441 aa32.81■■■□□ 2.84
SPTBN4-210ENST00000596900 ABCC3O15438 1527 aa32.79■■■□□ 2.84
SPTBN4-210ENST00000596900 WASHC2CQ9Y4E1 1318 aa32.78■■■□□ 2.84
SPTBN4-210ENST00000596900 CAMSAP1Q5T5Y3 1602 aa32.75■■■□□ 2.83
SPTBN4-210ENST00000596900 CLTCL1P53675 1640 aa32.68■■■□□ 2.82
SPTBN4-210ENST00000596900 NPATQ14207 1427 aa32.68■■■□□ 2.82
SPTBN4-210ENST00000596900 PPP6R1Q9UPN7 881 aa32.67■■■□□ 2.82
SPTBN4-210ENST00000596900 ARHGAP31Q2M1Z3 1444 aa32.65■■■□□ 2.82
SPTBN4-210ENST00000596900 UHRF1BP1Q6BDS2 1440 aa32.65■■■□□ 2.82
SPTBN4-210ENST00000596900 NEURL4Q96JN8 1562 aa32.63■■■□□ 2.81
SPTBN4-210ENST00000596900 CNTLNQ9NXG0 1405 aa32.62■■■□□ 2.81
SPTBN4-210ENST00000596900 NBPF8Q3BBV2 869 aa32.62■■■□□ 2.81
SPTBN4-210ENST00000596900 DCAF11Q8TEB1 546 aa32.62■■■□□ 2.81
SPTBN4-210ENST00000596900 SPATA31E1Q6ZUB1 1445 aa32.61■■■□□ 2.81
SPTBN4-210ENST00000596900 SIGLEC1Q9BZZ2 1709 aa32.61■■■□□ 2.81
SPTBN4-210ENST00000596900 KIF1BO60333 1816 aa32.6■■■□□ 2.81
SPTBN4-210ENST00000596900 DIEXFQ68CQ4 756 aaKnown RBP32.6■■■□□ 2.81
SPTBN4-210ENST00000596900 RGL3Q3MIN7 710 aa32.59■■■□□ 2.81
SPTBN4-210ENST00000596900 CFAP65Q6ZU64 1925 aaKnown RBP32.56■■■□□ 2.8
SPTBN4-210ENST00000596900 ZNF326Q5BKZ1 582 aaKnown RBP32.56■■■□□ 2.8
SPTBN4-210ENST00000596900 KDM2AQ9Y2K7 1162 aa32.54■■■□□ 2.8
SPTBN4-210ENST00000596900 NOS1P29475 1434 aa32.54■■■□□ 2.8
SPTBN4-210ENST00000596900 RALGAPBQ86X10 1494 aa32.53■■■□□ 2.8
SPTBN4-210ENST00000596900 UGGT1Q9NYU2 1555 aa32.52■■■□□ 2.8
SPTBN4-210ENST00000596900 EIF4G2P78344 907 aaKnown RBP eCLIP32.52■■■□□ 2.8
SPTBN4-210ENST00000596900 STAC3Q96MF2 364 aa32.52■■■□□ 2.8
SPTBN4-210ENST00000596900 CLTCQ00610 1675 aaKnown RBP32.51■■■□□ 2.79
SPTBN4-210ENST00000596900 PRAG1Q86YV5 1406 aa32.5■■■□□ 2.79
SPTBN4-210ENST00000596900 PREX1Q8TCU6 1659 aa32.49■■■□□ 2.79
SPTBN4-210ENST00000596900 PIK3C2BO00750 1634 aa32.46■■■□□ 2.79
SPTBN4-210ENST00000596900 SYNMO15061 1565 aa32.45■■■□□ 2.79
SPTBN4-210ENST00000596900 ARID4BQ4LE39 1312 aaPredicted RBP32.45■■■□□ 2.79
SPTBN4-210ENST00000596900 TRPM1Q7Z4N2 1603 aa32.44■■■□□ 2.78
SPTBN4-210ENST00000596900 MLECQ14165 292 aa32.44■■■□□ 2.78
SPTBN4-210ENST00000596900 ESF1Q9H501 851 aaKnown RBP32.44■■■□□ 2.78
SPTBN4-210ENST00000596900 ADGRB3O60242 1522 aa32.44■■■□□ 2.78
SPTBN4-210ENST00000596900 MROH2AA6NES4 1674 aa32.42■■■□□ 2.78
SPTBN4-210ENST00000596900 HSPA5P11021 654 aaKnown RBP32.42■■■□□ 2.78
SPTBN4-210ENST00000596900 HIRIP3Q9BW71 556 aaPredicted RBP32.4■■■□□ 2.78
SPTBN4-210ENST00000596900 SLC52A1Q9NWF4 448 aa32.39■■■□□ 2.78
SPTBN4-210ENST00000596900 IFT172Q9UG01 1749 aa32.38■■■□□ 2.77
SPTBN4-210ENST00000596900 ERVK-7P63135 1459 aa32.38■■■□□ 2.77
SPTBN4-210ENST00000596900 MADDQ8WXG6 1647 aa32.38■■■□□ 2.77
SPTBN4-210ENST00000596900 ROCK2O75116 1388 aaKnown RBP32.37■■■□□ 2.77
SPTBN4-210ENST00000596900 MYOM2P54296 1465 aa32.36■■■□□ 2.77
SPTBN4-210ENST00000596900 CARD11Q9BXL7 1154 aa32.35■■■□□ 2.77
SPTBN4-210ENST00000596900 LAMC1P11047 1609 aa32.34■■■□□ 2.77
SPTBN4-210ENST00000596900 USP47Q96K76 1375 aa32.33■■■□□ 2.77
SPTBN4-210ENST00000596900 CHGAP10645 457 aaKnown RBP32.33■■■□□ 2.77
SPTBN4-210ENST00000596900 SPATA31D1Q6ZQQ2 1576 aa32.32■■■□□ 2.77
SPTBN4-210ENST00000596900 GPRASP1Q5JY77 1395 aa32.3■■■□□ 2.76
SPTBN4-210ENST00000596900 RPGRIP1LQ68CZ1 1315 aa32.29■■■□□ 2.76
SPTBN4-210ENST00000596900 PPLO60437 1756 aa32.28■■■□□ 2.76
SPTBN4-210ENST00000596900 ZMYM3Q14202 1370 aa32.28■■■□□ 2.76
SPTBN4-210ENST00000596900 KIAA1210Q9ULL0 1709 aa32.27■■■□□ 2.76
SPTBN4-210ENST00000596900 IDI1Q13907 227 aa32.26■■■□□ 2.75
SPTBN4-210ENST00000596900 FBXO31Q5XUX0 539 aaPredicted RBP32.26■■■□□ 2.75
SPTBN4-210ENST00000596900 POLR1AO95602 1720 aaPredicted RBP32.24■■■□□ 2.75
SPTBN4-210ENST00000596900 TMEM131LA2VDJ0 1609 aa32.22■■■□□ 2.75
SPTBN4-210ENST00000596900 NRXN1Q9ULB1 1477 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms