RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 FBLN2P98095 1184 aa23.1■■□□□ 1.29
ARHGEF1-213ENST00000595897 PDE3BQ13370 1112 aa23.1■■□□□ 1.29
ARHGEF1-213ENST00000595897 ARHGEF12Q9NZN5 1544 aa23.09■■□□□ 1.29
ARHGEF1-213ENST00000595897 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
ARHGEF1-213ENST00000595897 C9orf84Q5VXU9 1444 aa23.09■■□□□ 1.29
ARHGEF1-213ENST00000595897 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
ARHGEF1-213ENST00000595897 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
ARHGEF1-213ENST00000595897 CROCC2H7BZ55 1655 aa23.04■■□□□ 1.28
ARHGEF1-213ENST00000595897 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
ARHGEF1-213ENST00000595897 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
ARHGEF1-213ENST00000595897 HNRNPMP52272 730 aaKnown RBP eCLIP23.03■■□□□ 1.28
ARHGEF1-213ENST00000595897 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
ARHGEF1-213ENST00000595897 BACH2Q9BYV9 841 aa23.03■■□□□ 1.28
ARHGEF1-213ENST00000595897 PLIN1O60240 522 aa23.02■■□□□ 1.28
ARHGEF1-213ENST00000595897 MS4A1P11836 297 aa23.01■■□□□ 1.27
ARHGEF1-213ENST00000595897 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
ARHGEF1-213ENST00000595897 CARMIL2Q6F5E8 1435 aa23.01■■□□□ 1.27
ARHGEF1-213ENST00000595897 NEFMP07197 916 aa23■■□□□ 1.27
ARHGEF1-213ENST00000595897 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
ARHGEF1-213ENST00000595897 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
ARHGEF1-213ENST00000595897 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
ARHGEF1-213ENST00000595897 ADCY10Q96PN6 1610 aa22.98■■□□□ 1.27
ARHGEF1-213ENST00000595897 PER1O15534 1290 aaPredicted RBP22.96■■□□□ 1.27
ARHGEF1-213ENST00000595897 CCDC144AA2RUR9 1427 aa22.95■■□□□ 1.26
ARHGEF1-213ENST00000595897 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
ARHGEF1-213ENST00000595897 CRBNQ96SW2 442 aa22.94■■□□□ 1.26
ARHGEF1-213ENST00000595897 MAGI1Q96QZ7 1491 aaPredicted RBP22.94■■□□□ 1.26
ARHGEF1-213ENST00000595897 KDM5DQ9BY66 1539 aa22.93■■□□□ 1.26
ARHGEF1-213ENST00000595897 PANK3Q9H999 370 aa22.92■■□□□ 1.26
ARHGEF1-213ENST00000595897 PRAG1Q86YV5 1406 aa22.92■■□□□ 1.26
ARHGEF1-213ENST00000595897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.261e-6■■■□□ 15.2
ARHGEF1-213ENST00000595897 USP35Q9P2H5 1018 aa22.92■■□□□ 1.26
ARHGEF1-213ENST00000595897 PTPRGP23470 1445 aa22.92■■□□□ 1.26
ARHGEF1-213ENST00000595897 SKAP1Q86WV1 359 aa22.91■■□□□ 1.26
ARHGEF1-213ENST00000595897 E9PCH4 1651 aa22.9■■□□□ 1.26
ARHGEF1-213ENST00000595897 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
ARHGEF1-213ENST00000595897 WASHC2CQ9Y4E1 1318 aa22.9■■□□□ 1.26
ARHGEF1-213ENST00000595897 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
ARHGEF1-213ENST00000595897 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.26
ARHGEF1-213ENST00000595897 CDC42BPAQ5VT25 1732 aa22.89■■□□□ 1.25
ARHGEF1-213ENST00000595897 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
ARHGEF1-213ENST00000595897 ATP10BO94823 1461 aa22.87■■□□□ 1.25
ARHGEF1-213ENST00000595897 DISP3Q9P2K9 1392 aa22.87■■□□□ 1.25
ARHGEF1-213ENST00000595897 FAM135AQ9P2D6 1515 aa22.86■■□□□ 1.25
ARHGEF1-213ENST00000595897 TMF1P82094 1093 aa22.86■■□□□ 1.25
ARHGEF1-213ENST00000595897 TESK2Q96S53 571 aa22.85■■□□□ 1.25
ARHGEF1-213ENST00000595897 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
ARHGEF1-213ENST00000595897 C20orf194Q5TEA3 1177 aa22.83■■□□□ 1.24
ARHGEF1-213ENST00000595897 IL27Q8NEV9 243 aa22.83■■□□□ 1.24
ARHGEF1-213ENST00000595897 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF1-213ENST00000595897 BLMP54132 1417 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF1-213ENST00000595897 DAXXQ9UER7 740 aaPredicted RBP22.82■■□□□ 1.24
ARHGEF1-213ENST00000595897 ADAMTS8Q9UP79 889 aa22.82■■□□□ 1.24
ARHGEF1-213ENST00000595897 GPRASP1Q5JY77 1395 aa22.81■■□□□ 1.24
ARHGEF1-213ENST00000595897 CCDC141Q6ZP82 1450 aa22.81■■□□□ 1.24
ARHGEF1-213ENST00000595897 TRPM1Q7Z4N2 1603 aa22.81■■□□□ 1.24
ARHGEF1-213ENST00000595897 ERBINQ96RT1 1412 aa22.8■■□□□ 1.24
ARHGEF1-213ENST00000595897 RSPH4AQ5TD94 716 aa22.8■■□□□ 1.24
ARHGEF1-213ENST00000595897 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
ARHGEF1-213ENST00000595897 INSRP06213 1382 aa22.79■■□□□ 1.24
ARHGEF1-213ENST00000595897 RTN4Q9NQC3 1192 aaKnown RBP22.78■■□□□ 1.24
ARHGEF1-213ENST00000595897 A2MP01023 1474 aa22.78■■□□□ 1.24
ARHGEF1-213ENST00000595897 ABCA8O94911 1581 aa22.77■■□□□ 1.24
ARHGEF1-213ENST00000595897 ARHGEF5Q12774 1597 aa22.77■■□□□ 1.24
ARHGEF1-213ENST00000595897 KNSTRNQ9Y448 316 aa22.77■■□□□ 1.23
ARHGEF1-213ENST00000595897 PLEKHH2Q8IVE3 1493 aa22.76■■□□□ 1.23
ARHGEF1-213ENST00000595897 SLC4A3P48751 1232 aa22.75■■□□□ 1.23
ARHGEF1-213ENST00000595897 NUP160Q12769 1436 aa22.75■■□□□ 1.23
ARHGEF1-213ENST00000595897 CENPQQ7L2Z9 268 aaPredicted RBP22.74■■□□□ 1.23
ARHGEF1-213ENST00000595897 PLA2R1Q13018 1463 aa22.74■■□□□ 1.23
ARHGEF1-213ENST00000595897 ZMYM4Q5VZL5 1548 aa22.73■■□□□ 1.23
ARHGEF1-213ENST00000595897 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.72■■□□□ 1.23
ARHGEF1-213ENST00000595897 KDM2BQ8NHM5 1336 aa22.71■■□□□ 1.23
ARHGEF1-213ENST00000595897 PRDM15P57071 1507 aaPredicted RBP22.71■■□□□ 1.23
ARHGEF1-213ENST00000595897 GOLGA2Q08379 1002 aa22.71■■□□□ 1.23
ARHGEF1-213ENST00000595897 DUSP27Q5VZP5 1158 aa22.71■■□□□ 1.23
ARHGEF1-213ENST00000595897 ERCC6Q03468 1493 aa22.7■■□□□ 1.22
ARHGEF1-213ENST00000595897 PPP2R1AP30153 589 aa22.7■■□□□ 1.22
ARHGEF1-213ENST00000595897 NFKBIBQ15653 356 aa22.68■■□□□ 1.22
ARHGEF1-213ENST00000595897 FAM161AQ3B820 660 aa22.68■■□□□ 1.22
ARHGEF1-213ENST00000595897 PLEKHH1Q9ULM0 1364 aa22.68■■□□□ 1.22
ARHGEF1-213ENST00000595897 SAMD9LQ8IVG5 1584 aa22.68■■□□□ 1.22
ARHGEF1-213ENST00000595897 PRKCSHP14314 528 aaPredicted RBP22.67■■□□□ 1.22
ARHGEF1-213ENST00000595897 RGS3P49796 1198 aa22.67■■□□□ 1.22
ARHGEF1-213ENST00000595897 GSE1Q14687 1217 aa22.66■■□□□ 1.22
ARHGEF1-213ENST00000595897 ANO8Q9HCE9 1232 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF1-213ENST00000595897 SYCP2Q9BX26 1530 aa22.64■■□□□ 1.22
ARHGEF1-213ENST00000595897 EIF2AK4Q9P2K8 1649 aaKnown RBP22.63■■□□□ 1.21
ARHGEF1-213ENST00000595897 LAMC1P11047 1609 aa22.62■■□□□ 1.21
ARHGEF1-213ENST00000595897 C8orf34Q49A92 452 aa22.62■■□□□ 1.21
ARHGEF1-213ENST00000595897 ARHGAP5Q13017 1502 aa22.62■■□□□ 1.21
ARHGEF1-213ENST00000595897 CDCA8Q53HL2 280 aa22.62■■□□□ 1.21
ARHGEF1-213ENST00000595897 CCDC146Q8IYE0 955 aa22.62■■□□□ 1.21
ARHGEF1-213ENST00000595897 AMER1Q5JTC6 1135 aaPredicted RBP22.61■■□□□ 1.21
ARHGEF1-213ENST00000595897 MAGI2Q86UL8 1455 aa22.61■■□□□ 1.21
ARHGEF1-213ENST00000595897 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
ARHGEF1-213ENST00000595897 SLFN5Q08AF3 891 aa22.59■■□□□ 1.21
ARHGEF1-213ENST00000595897 CDC42BPBQ9Y5S2 1711 aa22.59■■□□□ 1.21
ARHGEF1-213ENST00000595897 PREX2Q70Z35 1606 aa22.58■■□□□ 1.21
ARHGEF1-213ENST00000595897 WDR7Q9Y4E6 1490 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms