RNA–Protein interactions for RNA: ENST00000595566.1

LINC01872-202, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-202ENST00000595566 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
LINC01872-202ENST00000595566 NUTM2DQ5VT03 806 aaPredicted RBP12.28□□□□□ -0.44
LINC01872-202ENST00000595566 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
LINC01872-202ENST00000595566 LRP6O75581 1613 aa12.28□□□□□ -0.44
LINC01872-202ENST00000595566 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.44
LINC01872-202ENST00000595566 DEPDC5O75140 1603 aa12.27□□□□□ -0.44
LINC01872-202ENST00000595566 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
LINC01872-202ENST00000595566 KIF14Q15058 1648 aa12.26□□□□□ -0.45
LINC01872-202ENST00000595566 FAM135AQ9P2D6 1515 aa12.24□□□□□ -0.45
LINC01872-202ENST00000595566 ATP1B4Q9UN42 357 aaPredicted RBP12.23□□□□□ -0.45
LINC01872-202ENST00000595566 PHLPP1O60346 1717 aa12.23□□□□□ -0.45
LINC01872-202ENST00000595566 UGGT1Q9NYU2 1555 aa12.22□□□□□ -0.45
LINC01872-202ENST00000595566 RGS12O14924 1447 aa12.22□□□□□ -0.45
LINC01872-202ENST00000595566 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
LINC01872-202ENST00000595566 CDC42BPBQ9Y5S2 1711 aa12.21□□□□□ -0.45
LINC01872-202ENST00000595566 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
LINC01872-202ENST00000595566 CDK11AQ9UQ88 783 aaPredicted RBP12.2□□□□□ -0.46
LINC01872-202ENST00000595566 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
LINC01872-202ENST00000595566 A2MP01023 1474 aa12.19□□□□□ -0.46
LINC01872-202ENST00000595566 SAMD9LQ8IVG5 1584 aa12.18□□□□□ -0.46
LINC01872-202ENST00000595566 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
LINC01872-202ENST00000595566 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
LINC01872-202ENST00000595566 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
LINC01872-202ENST00000595566 AFF2P51816 1311 aa12.17□□□□□ -0.46
LINC01872-202ENST00000595566 ZC3H13Q5T200 1668 aaKnown RBP12.17□□□□□ -0.46
LINC01872-202ENST00000595566 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
LINC01872-202ENST00000595566 NLRP1Q9C000 1473 aa12.16□□□□□ -0.46
LINC01872-202ENST00000595566 RBM6P78332 1123 aaKnown RBP12.16□□□□□ -0.46
LINC01872-202ENST00000595566 PZPP20742 1482 aa12.15□□□□□ -0.46
LINC01872-202ENST00000595566 LRRC9Q6ZRR7 1453 aa12.15□□□□□ -0.46
LINC01872-202ENST00000595566 TROQ12816 1431 aaPredicted RBP12.15□□□□□ -0.46
LINC01872-202ENST00000595566 YY1P25490 414 aa12.15□□□□□ -0.46
LINC01872-202ENST00000595566 QTRT2Q9H974 415 aaKnown RBP12.15□□□□□ -0.46
LINC01872-202ENST00000595566 SLAIN2Q9P270 581 aa12.15□□□□□ -0.46
LINC01872-202ENST00000595566 COL16A1Q07092 1604 aaPredicted RBP12.15□□□□□ -0.47
LINC01872-202ENST00000595566 FGD6Q6ZV73 1430 aa12.14□□□□□ -0.47
LINC01872-202ENST00000595566 HNRNPMP52272 730 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC01872-202ENST00000595566 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
LINC01872-202ENST00000595566 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
LINC01872-202ENST00000595566 CLIP1P30622 1438 aa12.13□□□□□ -0.47
LINC01872-202ENST00000595566 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
LINC01872-202ENST00000595566 MAP3K1Q13233 1512 aa12.11□□□□□ -0.47
LINC01872-202ENST00000595566 LRP5O75197 1615 aa12.11□□□□□ -0.47
LINC01872-202ENST00000595566 PREX2Q70Z35 1606 aa12.11□□□□□ -0.47
LINC01872-202ENST00000595566 LTKP29376 864 aa12.11□□□□□ -0.47
LINC01872-202ENST00000595566 SCAF11Q99590 1463 aaKnown RBP12.1□□□□□ -0.47
LINC01872-202ENST00000595566 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
LINC01872-202ENST00000595566 TXNDC2Q86VQ3 553 aa12.1□□□□□ -0.47
LINC01872-202ENST00000595566 EP400Q96L91 3159 aa12.1□□□□□ -0.47
LINC01872-202ENST00000595566 SYCP2Q9BX26 1530 aa12.09□□□□□ -0.47
LINC01872-202ENST00000595566 WASHC2CQ9Y4E1 1318 aa12.09□□□□□ -0.47
LINC01872-202ENST00000595566 MSH6P52701 1360 aa12.08□□□□□ -0.48
LINC01872-202ENST00000595566 CCDC125Q86Z20 511 aa12.08□□□□□ -0.48
LINC01872-202ENST00000595566 NGLY1Q96IV0 654 aa12.08□□□□□ -0.48
LINC01872-202ENST00000595566 C8orf37Q96NL8 207 aa12.08□□□□□ -0.48
LINC01872-202ENST00000595566 SHPRHQ149N8 1683 aa12.07□□□□□ -0.48
LINC01872-202ENST00000595566 KCNA6P17658 529 aa12.07□□□□□ -0.48
LINC01872-202ENST00000595566 INO80Q9ULG1 1556 aaPredicted RBP12.06□□□□□ -0.48
LINC01872-202ENST00000595566 KIF3BO15066 747 aa12.06□□□□□ -0.48
LINC01872-202ENST00000595566 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
LINC01872-202ENST00000595566 ADGBQ8N7X0 1667 aa12.03□□□□□ -0.48
LINC01872-202ENST00000595566 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.48
LINC01872-202ENST00000595566 EID1Q9Y6B2 187 aa12.02□□□□□ -0.49
LINC01872-202ENST00000595566 CDC42BPAQ5VT25 1732 aa12.02□□□□□ -0.49
LINC01872-202ENST00000595566 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
LINC01872-202ENST00000595566 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
LINC01872-202ENST00000595566 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
LINC01872-202ENST00000595566 NCOA2Q15596 1464 aa12.01□□□□□ -0.49
LINC01872-202ENST00000595566 HRCP23327 699 aa12□□□□□ -0.49
LINC01872-202ENST00000595566 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
LINC01872-202ENST00000595566 DHX29Q7Z478 1369 aaKnown RBP12□□□□□ -0.49
LINC01872-202ENST00000595566 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
LINC01872-202ENST00000595566 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
LINC01872-202ENST00000595566 ARHGAP23Q9P227 1491 aa11.99□□□□□ -0.49
LINC01872-202ENST00000595566 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
LINC01872-202ENST00000595566 AHDC1Q5TGY3 1603 aaPredicted RBP11.99□□□□□ -0.49
LINC01872-202ENST00000595566 FMN1Q68DA7 1419 aa11.98□□□□□ -0.49
LINC01872-202ENST00000595566 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
LINC01872-202ENST00000595566 SLIT1O75093 1534 aa11.97□□□□□ -0.49
LINC01872-202ENST00000595566 KIAA1107Q9UPP5 1409 aa11.97□□□□□ -0.49
LINC01872-202ENST00000595566 NHSL1Q5SYE7 1610 aa11.97□□□□□ -0.49
LINC01872-202ENST00000595566 ABCC3O15438 1527 aa11.96□□□□□ -0.49
LINC01872-202ENST00000595566 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
LINC01872-202ENST00000595566 ADAMTS2O95450 1211 aa11.95□□□□□ -0.5
LINC01872-202ENST00000595566 USP21Q9UK80 565 aa11.95□□□□□ -0.5
LINC01872-202ENST00000595566 TRPC5Q9UL62 973 aaPredicted RBP11.95□□□□□ -0.5
LINC01872-202ENST00000595566 ERVK-7P63135 1459 aa11.95□□□□□ -0.5
LINC01872-202ENST00000595566 LRRIQ1Q96JM4 1722 aa11.94□□□□□ -0.5
LINC01872-202ENST00000595566 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
LINC01872-202ENST00000595566 GPATCH8Q9UKJ3 1502 aaKnown RBP11.94□□□□□ -0.5
LINC01872-202ENST00000595566 BLMP54132 1417 aaPredicted RBP11.94□□□□□ -0.5
LINC01872-202ENST00000595566 C14orf37Q86TY3 774 aa11.93□□□□□ -0.5
LINC01872-202ENST00000595566 CFDP1Q9UEE9 299 aaPredicted RBP11.93□□□□□ -0.5
LINC01872-202ENST00000595566 PLEKHH2Q8IVE3 1493 aa11.93□□□□□ -0.5
LINC01872-202ENST00000595566 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
LINC01872-202ENST00000595566 BRINP3Q76B58 766 aa11.92□□□□□ -0.5
LINC01872-202ENST00000595566 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
LINC01872-202ENST00000595566 TMEM2Q9UHN6 1383 aa11.91□□□□□ -0.5
LINC01872-202ENST00000595566 BCL9LQ86UU0 1499 aa11.9□□□□□ -0.5
LINC01872-202ENST00000595566 ATF3P18847 181 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms