RNA–Protein interactions for RNA: ENST00000595313.5

SOX2-OT-224, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 716 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-224ENST00000595313 PTPREP23469 700 aa11.16□□□□□ -0.62
SOX2-OT-224ENST00000595313 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
SOX2-OT-224ENST00000595313 PSEN2P49810 448 aa11.15□□□□□ -0.62
SOX2-OT-224ENST00000595313 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
SOX2-OT-224ENST00000595313 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
SOX2-OT-224ENST00000595313 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
SOX2-OT-224ENST00000595313 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
SOX2-OT-224ENST00000595313 MAP3K7O43318 606 aa11.11□□□□□ -0.63
SOX2-OT-224ENST00000595313 COL9A1P20849 921 aa11.11□□□□□ -0.63
SOX2-OT-224ENST00000595313 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
SOX2-OT-224ENST00000595313 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
SOX2-OT-224ENST00000595313 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
SOX2-OT-224ENST00000595313 NPDC1Q9NQX5 325 aaPredicted RBP11.1□□□□□ -0.63
SOX2-OT-224ENST00000595313 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
SOX2-OT-224ENST00000595313 TK2O00142 265 aa11.08□□□□□ -0.64
SOX2-OT-224ENST00000595313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
SOX2-OT-224ENST00000595313 KCNH8Q96L42 1107 aa11.08□□□□□ -0.64
SOX2-OT-224ENST00000595313 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
SOX2-OT-224ENST00000595313 CERKQ8TCT0 537 aa11.07□□□□□ -0.64
SOX2-OT-224ENST00000595313 BCANQ96GW7 911 aa11.06□□□□□ -0.64
SOX2-OT-224ENST00000595313 CDHR5Q9HBB8 845 aa11.06□□□□□ -0.64
SOX2-OT-224ENST00000595313 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
SOX2-OT-224ENST00000595313 VPS9D1Q9Y2B5 631 aa11.05□□□□□ -0.64
SOX2-OT-224ENST00000595313 ONECUT3O60422 494 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-224ENST00000595313 PTGDRQ13258 359 aa11.04□□□□□ -0.64
SOX2-OT-224ENST00000595313 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
SOX2-OT-224ENST00000595313 TULP1O00294 542 aaPredicted RBP11.03□□□□□ -0.64
SOX2-OT-224ENST00000595313 HRO43593 1189 aa11.03□□□□□ -0.64
SOX2-OT-224ENST00000595313 BHMG1C9JSJ3 638 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-224ENST00000595313 PRSS12P56730 875 aa11.01□□□□□ -0.65
SOX2-OT-224ENST00000595313 NUTM2FA1L443 756 aa11□□□□□ -0.65
SOX2-OT-224ENST00000595313 GPR37O15354 613 aa11□□□□□ -0.65
SOX2-OT-224ENST00000595313 TTC13Q8NBP0 860 aa11□□□□□ -0.65
SOX2-OT-224ENST00000595313 CDCA7LQ96GN5 454 aa11□□□□□ -0.65
SOX2-OT-224ENST00000595313 RBM27Q9P2N5 1060 aaKnown RBP11□□□□□ -0.65
SOX2-OT-224ENST00000595313 TRIM6-TRIM34B2RNG4 842 aa10.99□□□□□ -0.65
SOX2-OT-224ENST00000595313 PROX2Q3B8N5 592 aa10.99□□□□□ -0.65
SOX2-OT-224ENST00000595313 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
SOX2-OT-224ENST00000595313 RABGEF1Q9UJ41 708 aa10.99□□□□□ -0.65
SOX2-OT-224ENST00000595313 FCHSD2O94868 740 aa10.98□□□□□ -0.65
SOX2-OT-224ENST00000595313 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
SOX2-OT-224ENST00000595313 TSKSQ9UJT2 592 aa10.98□□□□□ -0.65
SOX2-OT-224ENST00000595313 FAM198AQ9UFP1 575 aa10.97□□□□□ -0.65
SOX2-OT-224ENST00000595313 HIC1Q14526 733 aa10.95□□□□□ -0.66
SOX2-OT-224ENST00000595313 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
SOX2-OT-224ENST00000595313 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
SOX2-OT-224ENST00000595313 GNPATO15228 680 aa10.92□□□□□ -0.66
SOX2-OT-224ENST00000595313 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
SOX2-OT-224ENST00000595313 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
SOX2-OT-224ENST00000595313 C3orf80F5H4A9 247 aa10.9□□□□□ -0.66
SOX2-OT-224ENST00000595313 FECHP22830 423 aa10.89□□□□□ -0.67
SOX2-OT-224ENST00000595313 LAPTM4BQ86VI4 370 aa10.89□□□□□ -0.67
SOX2-OT-224ENST00000595313 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
SOX2-OT-224ENST00000595313 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-224ENST00000595313 TATDN2Q93075 761 aa10.88□□□□□ -0.67
SOX2-OT-224ENST00000595313 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
SOX2-OT-224ENST00000595313 ZMYND10O75800 440 aa10.86□□□□□ -0.67
SOX2-OT-224ENST00000595313 MRPL50Q8N5N7 158 aaKnown RBP10.86□□□□□ -0.67
SOX2-OT-224ENST00000595313 EYA1Q99502 592 aa10.86□□□□□ -0.67
SOX2-OT-224ENST00000595313 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
SOX2-OT-224ENST00000595313 NUDT18Q6ZVK8 323 aa10.85□□□□□ -0.67
SOX2-OT-224ENST00000595313 MYT1LQ9UL68 1186 aa10.85□□□□□ -0.67
SOX2-OT-224ENST00000595313 NBPF26B4DH59 902 aa10.84□□□□□ -0.67
SOX2-OT-224ENST00000595313 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
SOX2-OT-224ENST00000595313 STAC3Q96MF2 364 aa10.84□□□□□ -0.67
SOX2-OT-224ENST00000595313 PNMA3Q9UL41 463 aa10.84□□□□□ -0.67
SOX2-OT-224ENST00000595313 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
SOX2-OT-224ENST00000595313 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
SOX2-OT-224ENST00000595313 SMAPO00193 183 aa10.82□□□□□ -0.68
SOX2-OT-224ENST00000595313 OATP04181 439 aa10.81□□□□□ -0.68
SOX2-OT-224ENST00000595313 MAP2K5Q13163 448 aa10.81□□□□□ -0.68
SOX2-OT-224ENST00000595313 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
SOX2-OT-224ENST00000595313 IRF6O14896 467 aa10.8□□□□□ -0.68
SOX2-OT-224ENST00000595313 FAM161AQ3B820 660 aa10.8□□□□□ -0.68
SOX2-OT-224ENST00000595313 MINK1Q8N4C8 1332 aaPredicted RBP10.8□□□□□ -0.68
SOX2-OT-224ENST00000595313 RBM46Q8TBY0 533 aaKnown RBP10.79□□□□□ -0.68
SOX2-OT-224ENST00000595313 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
SOX2-OT-224ENST00000595313 METTL3Q86U44 580 aaKnown RBP10.78□□□□□ -0.68
SOX2-OT-224ENST00000595313 RNF166Q96A37 237 aaPredicted RBP10.78□□□□□ -0.68
SOX2-OT-224ENST00000595313 GOLGA8CPA6NN73 597 aa10.76□□□□□ -0.69
SOX2-OT-224ENST00000595313 WNT2BQ93097 391 aa10.75□□□□□ -0.69
SOX2-OT-224ENST00000595313 PHOX2BQ99453 314 aa10.75□□□□□ -0.69
SOX2-OT-224ENST00000595313 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
SOX2-OT-224ENST00000595313 SOWAHBA6NEL2 793 aa10.73□□□□□ -0.69
SOX2-OT-224ENST00000595313 THSD4Q6ZMP0 1018 aa10.73□□□□□ -0.69
SOX2-OT-224ENST00000595313 ANKK1Q8NFD2 765 aa10.73□□□□□ -0.69
SOX2-OT-224ENST00000595313 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
SOX2-OT-224ENST00000595313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
SOX2-OT-224ENST00000595313 DNAJB2P25686 324 aa10.72□□□□□ -0.69
SOX2-OT-224ENST00000595313 TMEM134Q9H6X4 195 aa10.72□□□□□ -0.69
SOX2-OT-224ENST00000595313 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.69
SOX2-OT-224ENST00000595313 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
SOX2-OT-224ENST00000595313 CCDC102AQ96A19 550 aa10.71□□□□□ -0.69
SOX2-OT-224ENST00000595313 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
SOX2-OT-224ENST00000595313 HDGFP51858 240 aaKnown RBP10.69□□□□□ -0.7
SOX2-OT-224ENST00000595313 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
SOX2-OT-224ENST00000595313 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
SOX2-OT-224ENST00000595313 BCAMP50895 628 aa10.68□□□□□ -0.7
SOX2-OT-224ENST00000595313 LRCH3Q96II8 777 aa10.68□□□□□ -0.7
SOX2-OT-224ENST00000595313 HCSTQ9UBK5 93 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms