RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
PNKP-204ENST00000594661 DNAJC5Q9H3Z4 198 aa21.47■■□□□ 1.03
PNKP-204ENST00000594661 MAGI2Q86UL8 1455 aa21.47■■□□□ 1.03
PNKP-204ENST00000594661 ATP7AQ04656 1500 aa21.47■■□□□ 1.03
PNKP-204ENST00000594661 IQGAP3Q86VI3 1631 aa21.46■■□□□ 1.03
PNKP-204ENST00000594661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.46■■□□□ 1.031e-7■■■■□ 24.4
PNKP-204ENST00000594661 MSH5O43196 834 aa21.45■■□□□ 1.02
PNKP-204ENST00000594661 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
PNKP-204ENST00000594661 CFAP74Q9C0B2 1584 aa21.42■■□□□ 1.02
PNKP-204ENST00000594661 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
PNKP-204ENST00000594661 ZNF518AQ6AHZ1 1483 aa21.38■■□□□ 1.01
PNKP-204ENST00000594661 KIDINS220Q9ULH0 1771 aa21.37■■□□□ 1.01
PNKP-204ENST00000594661 PLA2R1Q13018 1463 aa21.36■■□□□ 1.01
PNKP-204ENST00000594661 FANCIQ9NVI1 1328 aa21.36■■□□□ 1.01
PNKP-204ENST00000594661 POGZQ7Z3K3 1410 aa21.35■■□□□ 1.01
PNKP-204ENST00000594661 DEPDC5O75140 1603 aa21.35■■□□□ 1.01
PNKP-204ENST00000594661 HSPA5P11021 654 aaKnown RBP21.34■■□□□ 1.01
PNKP-204ENST00000594661 KDM5CP41229 1560 aa21.33■■□□□ 1.01
PNKP-204ENST00000594661 MAP3K4Q9Y6R4 1608 aa21.33■■□□□ 1
PNKP-204ENST00000594661 DHX29Q7Z478 1369 aaKnown RBP21.31■■□□□ 1
PNKP-204ENST00000594661 CCDC144AA2RUR9 1427 aa21.31■■□□□ 1
PNKP-204ENST00000594661 NEO1Q92859 1461 aa21.31■■□□□ 1
PNKP-204ENST00000594661 EIF2AK4Q9P2K8 1649 aaKnown RBP21.31■■□□□ 1
PNKP-204ENST00000594661 BCANQ96GW7 911 aa21.31■■□□□ 1
PNKP-204ENST00000594661 ANO8Q9HCE9 1232 aaPredicted RBP21.31■■□□□ 1
PNKP-204ENST00000594661 EIF4G2P78344 907 aaKnown RBP eCLIP21.3■■□□□ 1
PNKP-204ENST00000594661 FKBP8Q14318 412 aa21.29■■□□□ 1
PNKP-204ENST00000594661 GLI2P10070 1586 aa21.28■■□□□ 1
PNKP-204ENST00000594661 E9PCH4 1651 aa21.28■■□□□ 1
PNKP-204ENST00000594661 ZNF326Q5BKZ1 582 aaKnown RBP21.28■■□□□ 1
PNKP-204ENST00000594661 ATP10AO60312 1499 aa21.27■■□□□ 1
PNKP-204ENST00000594661 HECW2Q9P2P5 1572 aa21.27■■□□□ 1
PNKP-204ENST00000594661 MROH1Q8NDA8 1641 aa21.27■■□□□ 1
PNKP-204ENST00000594661 KIF3BO15066 747 aa21.27■■□□□ 1
PNKP-204ENST00000594661 UHRF1BP1Q6BDS2 1440 aa21.27■■□□□ 1
PNKP-204ENST00000594661 VWDEQ8N2E2 1590 aa21.27■■□□□ 1
PNKP-204ENST00000594661 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
PNKP-204ENST00000594661 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
PNKP-204ENST00000594661 DIP2BQ9P265 1576 aa21.24■□□□□ 0.99
PNKP-204ENST00000594661 A2MP01023 1474 aa21.24■□□□□ 0.99
PNKP-204ENST00000594661 TET3O43151 1660 aa21.24■□□□□ 0.99
PNKP-204ENST00000594661 DEKP35659 375 aaKnown RBP21.23■□□□□ 0.99
PNKP-204ENST00000594661 ERICH6BQ5W0A0 696 aa21.23■□□□□ 0.99
PNKP-204ENST00000594661 SPATA31E1Q6ZUB1 1445 aa21.23■□□□□ 0.99
PNKP-204ENST00000594661 FRMPD1Q5SYB0 1578 aa21.23■□□□□ 0.99
PNKP-204ENST00000594661 ABCA6Q8N139 1617 aa21.22■□□□□ 0.99
PNKP-204ENST00000594661 RAPGEF3O95398 923 aa21.22■□□□□ 0.99
PNKP-204ENST00000594661 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
PNKP-204ENST00000594661 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
PNKP-204ENST00000594661 KANK1Q14678 1352 aa21.21■□□□□ 0.99
PNKP-204ENST00000594661 RALGAPBQ86X10 1494 aa21.21■□□□□ 0.99
PNKP-204ENST00000594661 WASHC2AQ641Q2 1341 aa21.21■□□□□ 0.99
PNKP-204ENST00000594661 RICTORQ6R327 1708 aa21.2■□□□□ 0.98
PNKP-204ENST00000594661 FAM69CQ0P6D2 419 aa21.19■□□□□ 0.98
PNKP-204ENST00000594661 SPHKAPQ2M3C7 1700 aa21.19■□□□□ 0.98
PNKP-204ENST00000594661 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
PNKP-204ENST00000594661 TRPM2O94759 1503 aa21.18■□□□□ 0.98
PNKP-204ENST00000594661 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
PNKP-204ENST00000594661 ANP32CO43423 234 aa21.17■□□□□ 0.98
PNKP-204ENST00000594661 PTPRTO14522 1441 aa21.17■□□□□ 0.98
PNKP-204ENST00000594661 C11orf95C9JLR9 678 aaPredicted RBP21.16■□□□□ 0.98
PNKP-204ENST00000594661 USP47Q96K76 1375 aa21.15■□□□□ 0.98
PNKP-204ENST00000594661 PRAG1Q86YV5 1406 aa21.15■□□□□ 0.98
PNKP-204ENST00000594661 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.98
PNKP-204ENST00000594661 PPRC1Q5VV67 1664 aaKnown RBP21.14■□□□□ 0.97
PNKP-204ENST00000594661 EFCAB6Q5THR3 1501 aa21.13■□□□□ 0.97
PNKP-204ENST00000594661 CLTCL1P53675 1640 aa21.13■□□□□ 0.97
PNKP-204ENST00000594661 CEP152O94986 1710 aa21.13■□□□□ 0.97
PNKP-204ENST00000594661 BCORL1Q5H9F3 1711 aa21.13■□□□□ 0.97
PNKP-204ENST00000594661 TSPOAP1O95153 1857 aa21.13■□□□□ 0.97
PNKP-204ENST00000594661 NEFLP07196 543 aa21.13■□□□□ 0.97
PNKP-204ENST00000594661 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
PNKP-204ENST00000594661 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
PNKP-204ENST00000594661 TRPM1Q7Z4N2 1603 aa21.11■□□□□ 0.97
PNKP-204ENST00000594661 UBE2Q2Q8WVN8 375 aa21.11■□□□□ 0.97
PNKP-204ENST00000594661 POLR1AO95602 1720 aaPredicted RBP21.11■□□□□ 0.97
PNKP-204ENST00000594661 CARD11Q9BXL7 1154 aa21.1■□□□□ 0.97
PNKP-204ENST00000594661 YEATS2Q9ULM3 1422 aa21.09■□□□□ 0.97
PNKP-204ENST00000594661 CCER2I3L3R5 266 aa21.09■□□□□ 0.97
PNKP-204ENST00000594661 ROCK2O75116 1388 aaKnown RBP21.08■□□□□ 0.96
PNKP-204ENST00000594661 KIF7Q2M1P5 1343 aa21.07■□□□□ 0.96
PNKP-204ENST00000594661 GGT6Q6P531 493 aa21.07■□□□□ 0.96
PNKP-204ENST00000594661 SALL2Q9Y467 1007 aaPredicted RBP21.06■□□□□ 0.96
PNKP-204ENST00000594661 UGGT1Q9NYU2 1555 aa21.06■□□□□ 0.96
PNKP-204ENST00000594661 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
PNKP-204ENST00000594661 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
PNKP-204ENST00000594661 KIF13AQ9H1H9 1805 aa21.04■□□□□ 0.96
PNKP-204ENST00000594661 ABCC3O15438 1527 aa21.03■□□□□ 0.96
PNKP-204ENST00000594661 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
PNKP-204ENST00000594661 NPATQ14207 1427 aa21.01■□□□□ 0.95
PNKP-204ENST00000594661 GPRASP1Q5JY77 1395 aa21.01■□□□□ 0.95
PNKP-204ENST00000594661 MADDQ8WXG6 1647 aa21■□□□□ 0.95
PNKP-204ENST00000594661 ST20-MTHFSA0A0A6YYL1 179 aa20.99■□□□□ 0.95
PNKP-204ENST00000594661 NEURL4Q96JN8 1562 aa20.99■□□□□ 0.95
PNKP-204ENST00000594661 WASHC2CQ9Y4E1 1318 aa20.99■□□□□ 0.95
PNKP-204ENST00000594661 LAMC1P11047 1609 aa20.99■□□□□ 0.95
PNKP-204ENST00000594661 CAMSAP1Q5T5Y3 1602 aa20.98■□□□□ 0.95
PNKP-204ENST00000594661 KIF1BO60333 1816 aa20.96■□□□□ 0.95
PNKP-204ENST00000594661 MROH2AA6NES4 1674 aa20.96■□□□□ 0.95
PNKP-204ENST00000594661 CFAP65Q6ZU64 1925 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms