RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 MAPKBP1O60336 1514 aa6.95□□□□□ -1.3
LINC00649-204ENST00000593977 COL17A1Q9UMD9 1497 aaPredicted RBP6.94□□□□□ -1.3
LINC00649-204ENST00000593977 MS4A4AQ96JQ5 239 aa6.94□□□□□ -1.3
LINC00649-204ENST00000593977 ABCC8Q09428 1581 aa6.94□□□□□ -1.3
LINC00649-204ENST00000593977 GOLGA2Q08379 1002 aa6.93□□□□□ -1.3
LINC00649-204ENST00000593977 ASTLQ6HA08 431 aaPredicted RBP6.93□□□□□ -1.3
LINC00649-204ENST00000593977 ZMYND15Q9H091 742 aa6.93□□□□□ -1.3
LINC00649-204ENST00000593977 TOP2BQ02880 1626 aa6.93□□□□□ -1.3
LINC00649-204ENST00000593977 TSPOAP1O95153 1857 aa6.92□□□□□ -1.3
LINC00649-204ENST00000593977 AK7Q96M32 723 aa6.92□□□□□ -1.3
LINC00649-204ENST00000593977 PHF12Q96QT6 1004 aa6.92□□□□□ -1.3
LINC00649-204ENST00000593977 ARID3AQ99856 593 aa6.91□□□□□ -1.3
LINC00649-204ENST00000593977 POLA1P09884 1462 aaPredicted RBP6.91□□□□□ -1.3
LINC00649-204ENST00000593977 RAD54L2Q9Y4B4 1467 aa6.91□□□□□ -1.3
LINC00649-204ENST00000593977 CEP170Q5SW79 1584 aa6.91□□□□□ -1.3
LINC00649-204ENST00000593977 DNMBPQ6XZF7 1577 aa6.9□□□□□ -1.31
LINC00649-204ENST00000593977 ATMINO43313 823 aaPredicted RBP6.89□□□□□ -1.31
LINC00649-204ENST00000593977 GPIHBP1Q8IV16 184 aa6.89□□□□□ -1.31
LINC00649-204ENST00000593977 RSPH6AQ9H0K4 717 aa6.89□□□□□ -1.31
LINC00649-204ENST00000593977 GRIN2BQ13224 1484 aa6.88□□□□□ -1.31
LINC00649-204ENST00000593977 MKRN3Q13064 507 aaKnown RBP6.88□□□□□ -1.31
LINC00649-204ENST00000593977 MMRN1Q13201 1228 aa6.88□□□□□ -1.31
LINC00649-204ENST00000593977 TMEM106CQ9BVX2 250 aa6.88□□□□□ -1.31
LINC00649-204ENST00000593977 CCDC9Q9Y3X0 531 aaKnown RBP6.88□□□□□ -1.31
LINC00649-204ENST00000593977 PCF11O94913 1555 aaKnown RBP6.87□□□□□ -1.31
LINC00649-204ENST00000593977 SOGA1O94964 1423 aa6.87□□□□□ -1.31
LINC00649-204ENST00000593977 LOC105371045A0A1W2PR82 267 aa6.87□□□□□ -1.31
LINC00649-204ENST00000593977 KRI1Q8N9T8 703 aaKnown RBP6.87□□□□□ -1.31
LINC00649-204ENST00000593977 SPDYE16A6NNV3 312 aaPredicted RBP6.86□□□□□ -1.31
LINC00649-204ENST00000593977 PPP1R15BQ5SWA1 713 aa6.86□□□□□ -1.31
LINC00649-204ENST00000593977 RBM26Q5T8P6 1007 aaKnown RBP6.86□□□□□ -1.31
LINC00649-204ENST00000593977 C1orf115Q9H7X2 142 aa6.86□□□□□ -1.31
LINC00649-204ENST00000593977 GPHNQ9NQX3 736 aaPredicted RBP6.86□□□□□ -1.31
LINC00649-204ENST00000593977 PRDM2Q13029 1718 aa6.86□□□□□ -1.31
LINC00649-204ENST00000593977 TTBK1Q5TCY1 1321 aaPredicted RBP6.85□□□□□ -1.31
LINC00649-204ENST00000593977 MLLT3P42568 568 aaPredicted RBP6.85□□□□□ -1.31
LINC00649-204ENST00000593977 PTPRMP28827 1452 aa6.85□□□□□ -1.31
LINC00649-204ENST00000593977 PPRC1Q5VV67 1664 aaKnown RBP6.84□□□□□ -1.31
LINC00649-204ENST00000593977 WDR97A6NE52 1622 aa6.84□□□□□ -1.31
LINC00649-204ENST00000593977 SHROOM2Q13796 1616 aa6.84□□□□□ -1.31
LINC00649-204ENST00000593977 ZBTB7CA1YPR0 619 aa6.84□□□□□ -1.31
LINC00649-204ENST00000593977 HSPA2P54652 639 aa6.84□□□□□ -1.31
LINC00649-204ENST00000593977 WIZO95785 1651 aa6.84□□□□□ -1.32
LINC00649-204ENST00000593977 SPNS2Q8IVW8 549 aa6.83□□□□□ -1.32
LINC00649-204ENST00000593977 KDM4CQ9H3R0 1056 aa6.83□□□□□ -1.32
LINC00649-204ENST00000593977 GPBP1L1Q9HC44 474 aaPredicted RBP6.83□□□□□ -1.32
LINC00649-204ENST00000593977 TRIM66O15016 1216 aa6.82□□□□□ -1.32
LINC00649-204ENST00000593977 PDIA6Q15084 440 aa6.82□□□□□ -1.32
LINC00649-204ENST00000593977 MS4A3Q96HJ5 214 aa6.82□□□□□ -1.32
LINC00649-204ENST00000593977 NUP160Q12769 1436 aa6.82□□□□□ -1.32
LINC00649-204ENST00000593977 MYT1Q01538 1121 aa6.81□□□□□ -1.32
LINC00649-204ENST00000593977 PDE4DQ08499 809 aa6.81□□□□□ -1.32
LINC00649-204ENST00000593977 IL27Q8NEV9 243 aa6.81□□□□□ -1.32
LINC00649-204ENST00000593977 NECTIN2Q92692 538 aa6.81□□□□□ -1.32
LINC00649-204ENST00000593977 PRG4Q92954 1404 aaPredicted RBP6.81□□□□□ -1.32
LINC00649-204ENST00000593977 ADCY10Q96PN6 1610 aa6.8□□□□□ -1.32
LINC00649-204ENST00000593977 DPYSL4O14531 572 aa6.8□□□□□ -1.32
LINC00649-204ENST00000593977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC00649-204ENST00000593977 PDIA4P13667 645 aaKnown RBP6.79□□□□□ -1.32
LINC00649-204ENST00000593977 TIE1P35590 1138 aa6.79□□□□□ -1.32
LINC00649-204ENST00000593977 EMILIN3Q9NT22 766 aa6.79□□□□□ -1.32
LINC00649-204ENST00000593977 GRIN2AQ12879 1464 aa6.79□□□□□ -1.32
LINC00649-204ENST00000593977 SRCAPQ6ZRS2 3230 aa6.78□□□□□ -1.32
LINC00649-204ENST00000593977 GLI2P10070 1586 aa6.78□□□□□ -1.32
LINC00649-204ENST00000593977 DSG2Q14126 1118 aa6.78□□□□□ -1.32
LINC00649-204ENST00000593977 ATN1P54259 1190 aaPredicted RBP6.77□□□□□ -1.33
LINC00649-204ENST00000593977 FOXK1P85037 733 aa6.77□□□□□ -1.33
LINC00649-204ENST00000593977 TMC2Q8TDI7 906 aa6.77□□□□□ -1.33
LINC00649-204ENST00000593977 JPH4Q96JJ6 628 aa6.77□□□□□ -1.33
LINC00649-204ENST00000593977 TRPC6Q9Y210 931 aa6.77□□□□□ -1.33
LINC00649-204ENST00000593977 MINK1Q8N4C8 1332 aaPredicted RBP6.76□□□□□ -1.33
LINC00649-204ENST00000593977 POTEFA5A3E0 1075 aa6.76□□□□□ -1.33
LINC00649-204ENST00000593977 ARID3CA6NKF2 412 aa6.76□□□□□ -1.33
LINC00649-204ENST00000593977 TTLL13PA6NNM8 815 aa6.76□□□□□ -1.33
LINC00649-204ENST00000593977 ST18O60284 1047 aa6.76□□□□□ -1.33
LINC00649-204ENST00000593977 ADAMTSL3P82987 1691 aa6.76□□□□□ -1.33
LINC00649-204ENST00000593977 GPR37O15354 613 aa6.75□□□□□ -1.33
LINC00649-204ENST00000593977 MICALL2Q8IY33 904 aa6.74□□□□□ -1.33
LINC00649-204ENST00000593977 DDRGK1Q96HY6 314 aa6.74□□□□□ -1.33
LINC00649-204ENST00000593977 MED1Q15648 1581 aaPredicted RBP6.74□□□□□ -1.33
LINC00649-204ENST00000593977 FGD5Q6ZNL6 1462 aa6.73□□□□□ -1.33
LINC00649-204ENST00000593977 MAP2K5Q13163 448 aa6.73□□□□□ -1.33
LINC00649-204ENST00000593977 TEX14Q8IWB6 1497 aa6.73□□□□□ -1.33
LINC00649-204ENST00000593977 APBB1O00213 710 aa6.72□□□□□ -1.33
LINC00649-204ENST00000593977 FAM117AQ9C073 453 aa6.72□□□□□ -1.33
LINC00649-204ENST00000593977 ASXL2Q76L83 1435 aa6.72□□□□□ -1.33
LINC00649-204ENST00000593977 PLB1Q6P1J6 1458 aa6.72□□□□□ -1.33
LINC00649-204ENST00000593977 KIF21BO75037 1637 aa6.72□□□□□ -1.33
LINC00649-204ENST00000593977 NUTM2FA1L443 756 aa6.71□□□□□ -1.34
LINC00649-204ENST00000593977 ZNF316A6NFI3 1004 aaPredicted RBP6.71□□□□□ -1.34
LINC00649-204ENST00000593977 IGSF3O75054 1194 aa6.71□□□□□ -1.34
LINC00649-204ENST00000593977 AMHR2Q16671 573 aa6.71□□□□□ -1.34
LINC00649-204ENST00000593977 PLPP6Q8IY26 295 aa6.71□□□□□ -1.34
LINC00649-204ENST00000593977 BMP2KQ9NSY1 1161 aaPredicted RBP6.71□□□□□ -1.34
LINC00649-204ENST00000593977 TRIM35Q9UPQ4 493 aa6.71□□□□□ -1.34
LINC00649-204ENST00000593977 IQSEC2Q5JU85 1478 aa6.71□□□□□ -1.34
LINC00649-204ENST00000593977 PBRM1Q86U86 1689 aa6.71□□□□□ -1.34
LINC00649-204ENST00000593977 TOP2AP11388 1531 aaKnown RBP6.71□□□□□ -1.34
LINC00649-204ENST00000593977 GRXCR2A6NFK2 248 aa6.7□□□□□ -1.34
LINC00649-204ENST00000593977 IRF6O14896 467 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms