RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
ZNF558-202ENST00000593891 IQGAP1P46940 1657 aa20.08■□□□□ 0.81
ZNF558-202ENST00000593891 A2MP01023 1474 aa20.08■□□□□ 0.81
ZNF558-202ENST00000593891 CDK12Q9NYV4 1490 aaPredicted RBP20.06■□□□□ 0.8
ZNF558-202ENST00000593891 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
ZNF558-202ENST00000593891 ITSN2Q9NZM3 1697 aa20.05■□□□□ 0.8
ZNF558-202ENST00000593891 SAMD9LQ8IVG5 1584 aa20.04■□□□□ 0.8
ZNF558-202ENST00000593891 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
ZNF558-202ENST00000593891 SPATA31A6Q5VVP1 1343 aa20.03■□□□□ 0.8
ZNF558-202ENST00000593891 MIA2Q96PC5 1412 aa20.03■□□□□ 0.8
ZNF558-202ENST00000593891 RBM33Q96EV2 1170 aaKnown RBP20.03■□□□□ 0.8
ZNF558-202ENST00000593891 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.8
ZNF558-202ENST00000593891 KDM5DQ9BY66 1539 aa20.02■□□□□ 0.79
ZNF558-202ENST00000593891 CDC42BPBQ9Y5S2 1711 aa20.01■□□□□ 0.79
ZNF558-202ENST00000593891 PLXNC1O60486 1568 aa20■□□□□ 0.79
ZNF558-202ENST00000593891 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
ZNF558-202ENST00000593891 NUTM2BA6NNL0 878 aaPredicted RBP19.99■□□□□ 0.79
ZNF558-202ENST00000593891 NUTM2EB1AL46 878 aaPredicted RBP19.99■□□□□ 0.79
ZNF558-202ENST00000593891 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.79
ZNF558-202ENST00000593891 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
ZNF558-202ENST00000593891 NUTM2AQ8IVF1 878 aaPredicted RBP19.99■□□□□ 0.79
ZNF558-202ENST00000593891 ROBO1Q9Y6N7 1651 aa19.99■□□□□ 0.79
ZNF558-202ENST00000593891 PZPP20742 1482 aa19.99■□□□□ 0.79
ZNF558-202ENST00000593891 LRRC9Q6ZRR7 1453 aa19.97■□□□□ 0.79
ZNF558-202ENST00000593891 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
ZNF558-202ENST00000593891 TMEM94Q12767 1356 aa19.96■□□□□ 0.79
ZNF558-202ENST00000593891 PREX2Q70Z35 1606 aa19.95■□□□□ 0.78
ZNF558-202ENST00000593891 LRP6O75581 1613 aa19.94■□□□□ 0.78
ZNF558-202ENST00000593891 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
ZNF558-202ENST00000593891 SETBP1Q9Y6X0 1596 aa19.93■□□□□ 0.78
ZNF558-202ENST00000593891 SLAIN2Q9P270 581 aa19.93■□□□□ 0.78
ZNF558-202ENST00000593891 FMN1Q68DA7 1419 aa19.93■□□□□ 0.78
ZNF558-202ENST00000593891 PROSER2Q86WR7 435 aaPredicted RBP19.9■□□□□ 0.78
ZNF558-202ENST00000593891 FGD6Q6ZV73 1430 aa19.9■□□□□ 0.78
ZNF558-202ENST00000593891 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
ZNF558-202ENST00000593891 SYCP2Q9BX26 1530 aa19.88■□□□□ 0.77
ZNF558-202ENST00000593891 ATAD2Q6PL18 1390 aa19.88■□□□□ 0.77
ZNF558-202ENST00000593891 RBM6P78332 1123 aaKnown RBP19.88■□□□□ 0.77
ZNF558-202ENST00000593891 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
ZNF558-202ENST00000593891 XIRP1Q702N8 1843 aaKnown RBP19.88■□□□□ 0.77
ZNF558-202ENST00000593891 SCAF11Q99590 1463 aaKnown RBP19.87■□□□□ 0.77
ZNF558-202ENST00000593891 KIF3BO15066 747 aa19.87■□□□□ 0.77
ZNF558-202ENST00000593891 RGS12O14924 1447 aa19.86■□□□□ 0.77
ZNF558-202ENST00000593891 AFF2P51816 1311 aa19.86■□□□□ 0.77
ZNF558-202ENST00000593891 ZC3H13Q5T200 1668 aaKnown RBP19.85■□□□□ 0.77
ZNF558-202ENST00000593891 KCNA6P17658 529 aa19.85■□□□□ 0.77
ZNF558-202ENST00000593891 IFFO2Q5TF58 517 aa19.85■□□□□ 0.77
ZNF558-202ENST00000593891 KIAA1107Q9UPP5 1409 aa19.85■□□□□ 0.77
ZNF558-202ENST00000593891 INO80Q9ULG1 1556 aaPredicted RBP19.84■□□□□ 0.77
ZNF558-202ENST00000593891 LTKP29376 864 aa19.84■□□□□ 0.77
ZNF558-202ENST00000593891 QTRT2Q9H974 415 aaKnown RBP19.84■□□□□ 0.77
ZNF558-202ENST00000593891 EID1Q9Y6B2 187 aa19.84■□□□□ 0.77
ZNF558-202ENST00000593891 MSH6P52701 1360 aa19.83■□□□□ 0.77
ZNF558-202ENST00000593891 DHX29Q7Z478 1369 aaKnown RBP19.83■□□□□ 0.77
ZNF558-202ENST00000593891 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
ZNF558-202ENST00000593891 PLEKHH2Q8IVE3 1493 aa19.81■□□□□ 0.76
ZNF558-202ENST00000593891 CCDC125Q86Z20 511 aa19.81■□□□□ 0.76
ZNF558-202ENST00000593891 NGLY1Q96IV0 654 aa19.81■□□□□ 0.76
ZNF558-202ENST00000593891 ADGBQ8N7X0 1667 aa19.78■□□□□ 0.76
ZNF558-202ENST00000593891 COL16A1Q07092 1604 aaPredicted RBP19.78■□□□□ 0.76
ZNF558-202ENST00000593891 MAP3K1Q13233 1512 aa19.77■□□□□ 0.76
ZNF558-202ENST00000593891 CFDP1Q9UEE9 299 aaPredicted RBP19.77■□□□□ 0.76
ZNF558-202ENST00000593891 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
ZNF558-202ENST00000593891 PRDM15P57071 1507 aaPredicted RBP19.72■□□□□ 0.75
ZNF558-202ENST00000593891 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
ZNF558-202ENST00000593891 RTEL1-TNFRSF6BF6WH68 1400 aa19.71■□□□□ 0.75
ZNF558-202ENST00000593891 C8orf37Q96NL8 207 aa19.71■□□□□ 0.75
ZNF558-202ENST00000593891 ARHGAP23Q9P227 1491 aa19.71■□□□□ 0.75
ZNF558-202ENST00000593891 SLIT1O75093 1534 aa19.69■□□□□ 0.74
ZNF558-202ENST00000593891 ABCC3O15438 1527 aa19.68■□□□□ 0.74
ZNF558-202ENST00000593891 YY1P25490 414 aa19.68■□□□□ 0.74
ZNF558-202ENST00000593891 SLC26A8Q96RN1 970 aa19.68■□□□□ 0.74
ZNF558-202ENST00000593891 SHPRHQ149N8 1683 aa19.68■□□□□ 0.74
ZNF558-202ENST00000593891 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
ZNF558-202ENST00000593891 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
ZNF558-202ENST00000593891 NKTRP30414 1462 aaKnown RBP19.66■□□□□ 0.74
ZNF558-202ENST00000593891 ERVK-7P63135 1459 aa19.65■□□□□ 0.74
ZNF558-202ENST00000593891 CCDC18Q5T9S5 1454 aa19.64■□□□□ 0.73
ZNF558-202ENST00000593891 LRP5O75197 1615 aa19.63■□□□□ 0.73
ZNF558-202ENST00000593891 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
ZNF558-202ENST00000593891 C14orf37Q86TY3 774 aa19.62■□□□□ 0.73
ZNF558-202ENST00000593891 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
ZNF558-202ENST00000593891 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
ZNF558-202ENST00000593891 CCNB3Q8WWL7 1395 aa19.61■□□□□ 0.73
ZNF558-202ENST00000593891 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
ZNF558-202ENST00000593891 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
ZNF558-202ENST00000593891 CADPS2Q86UW7 1296 aa19.6■□□□□ 0.73
ZNF558-202ENST00000593891 EEA1Q15075 1411 aa19.59■□□□□ 0.73
ZNF558-202ENST00000593891 ATF3P18847 181 aa19.58■□□□□ 0.72
ZNF558-202ENST00000593891 BCANQ96GW7 911 aa19.58■□□□□ 0.72
ZNF558-202ENST00000593891 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
ZNF558-202ENST00000593891 ZNF644Q9H582 1327 aaPredicted RBP19.57■□□□□ 0.72
ZNF558-202ENST00000593891 LRRIQ1Q96JM4 1722 aa19.57■□□□□ 0.72
ZNF558-202ENST00000593891 TRPC5Q9UL62 973 aaPredicted RBP19.57■□□□□ 0.72
ZNF558-202ENST00000593891 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
ZNF558-202ENST00000593891 LRRC59Q96AG4 307 aaKnown RBP19.56■□□□□ 0.72
ZNF558-202ENST00000593891 MBD5Q9P267 1494 aa19.55■□□□□ 0.72
ZNF558-202ENST00000593891 NCOA3Q9Y6Q9 1424 aa19.54■□□□□ 0.72
ZNF558-202ENST00000593891 USP21Q9UK80 565 aa19.54■□□□□ 0.72
ZNF558-202ENST00000593891 BRINP3Q76B58 766 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms