RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 FBXO41Q8TF61 875 aa30.88■■■□□ 2.53
COPE-204ENST00000593827 KIF15Q9NS87 1388 aa30.88■■■□□ 2.53
COPE-204ENST00000593827 DNMT1P26358 1616 aaKnown RBP30.87■■■□□ 2.53
COPE-204ENST00000593827 ANKRD30AQ9BXX3 1397 aa30.87■■■□□ 2.53
COPE-204ENST00000593827 CLTCQ00610 1675 aaKnown RBP30.86■■■□□ 2.53
COPE-204ENST00000593827 KDM5DQ9BY66 1539 aa30.85■■■□□ 2.53
COPE-204ENST00000593827 RRP7BPQ9NSQ0 103 aa30.85■■■□□ 2.53
COPE-204ENST00000593827 EIF2AK4Q9P2K8 1649 aaKnown RBP30.83■■■□□ 2.53
COPE-204ENST00000593827 ERBINQ96RT1 1412 aa30.82■■■□□ 2.52
COPE-204ENST00000593827 CROCC2H7BZ55 1655 aa30.81■■■□□ 2.52
COPE-204ENST00000593827 PTPRKQ15262 1439 aa30.81■■■□□ 2.52
COPE-204ENST00000593827 CHIC2Q9UKJ5 165 aa30.8■■■□□ 2.52
COPE-204ENST00000593827 DMRT2Q9Y5R5 561 aa30.8■■■□□ 2.52
COPE-204ENST00000593827 RNF17Q9BXT8 1623 aaKnown RBP30.76■■■□□ 2.52
COPE-204ENST00000593827 PZPP20742 1482 aa30.75■■■□□ 2.51
COPE-204ENST00000593827 NCOA1Q15788 1441 aa30.74■■■□□ 2.51
COPE-204ENST00000593827 ADGRL2O95490 1459 aa30.72■■■□□ 2.51
COPE-204ENST00000593827 KANK1Q14678 1352 aa30.71■■■□□ 2.51
COPE-204ENST00000593827 TNRQ92752 1358 aa30.69■■■□□ 2.5
COPE-204ENST00000593827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.69■■■□□ 2.52e-7■■□□□ 12.9
COPE-204ENST00000593827 PPARGC1BQ86YN6 1023 aaKnown RBP30.69■■■□□ 2.5
COPE-204ENST00000593827 ZC3H13Q5T200 1668 aaKnown RBP30.68■■■□□ 2.5
COPE-204ENST00000593827 ABCC3O15438 1527 aa30.68■■■□□ 2.5
COPE-204ENST00000593827 FBXO31Q5XUX0 539 aaPredicted RBP30.65■■■□□ 2.5
COPE-204ENST00000593827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.64■■■□□ 2.54e-6■■■□□ 15.1
COPE-204ENST00000593827 MYO3AQ8NEV4 1616 aa30.62■■■□□ 2.49
COPE-204ENST00000593827 A2ML1A8K2U0 1454 aa30.62■■■□□ 2.49
COPE-204ENST00000593827 PRDM15P57071 1507 aaPredicted RBP30.62■■■□□ 2.49
COPE-204ENST00000593827 ROCK1Q13464 1354 aa30.61■■■□□ 2.49
COPE-204ENST00000593827 CEP170BQ9Y4F5 1589 aaPredicted RBP30.61■■■□□ 2.49
COPE-204ENST00000593827 MROH1Q8NDA8 1641 aa30.6■■■□□ 2.49
COPE-204ENST00000593827 ANKRD50Q9ULJ7 1429 aa30.6■■■□□ 2.49
COPE-204ENST00000593827 ZNF142P52746 1687 aaPredicted RBP30.58■■■□□ 2.49
COPE-204ENST00000593827 NLRP1Q9C000 1473 aa30.58■■■□□ 2.49
COPE-204ENST00000593827 PKD2Q13563 968 aa30.58■■■□□ 2.49
COPE-204ENST00000593827 PLA2R1Q13018 1463 aa30.57■■■□□ 2.48
COPE-204ENST00000593827 PTPRTO14522 1441 aa30.57■■■□□ 2.48
COPE-204ENST00000593827 ARHGAP31Q2M1Z3 1444 aa30.56■■■□□ 2.48
COPE-204ENST00000593827 CAMSAP1Q5T5Y3 1602 aa30.56■■■□□ 2.48
COPE-204ENST00000593827 DEPDC5O75140 1603 aa30.54■■■□□ 2.48
COPE-204ENST00000593827 ITGAEP38570 1179 aa30.53■■■□□ 2.48
COPE-204ENST00000593827 THEMISQ8N1K5 641 aaPredicted RBP30.53■■■□□ 2.48
COPE-204ENST00000593827 ERVK-7P63135 1459 aa30.51■■■□□ 2.48
COPE-204ENST00000593827 STRCQ7RTU9 1775 aa30.51■■■□□ 2.47
COPE-204ENST00000593827 SPATA31D1Q6ZQQ2 1576 aa30.5■■■□□ 2.47
COPE-204ENST00000593827 RRBP1Q9P2E9 1410 aaKnown RBP30.5■■■□□ 2.47
COPE-204ENST00000593827 LMTK2Q8IWU2 1503 aa30.49■■■□□ 2.47
COPE-204ENST00000593827 CEP152O94986 1710 aa30.47■■■□□ 2.47
COPE-204ENST00000593827 NCKAP5LQ9HCH0 1330 aa30.46■■■□□ 2.47
COPE-204ENST00000593827 VWDEQ8N2E2 1590 aa30.44■■■□□ 2.46
COPE-204ENST00000593827 UGGT1Q9NYU2 1555 aa30.44■■■□□ 2.46
COPE-204ENST00000593827 ANKLE2Q86XL3 938 aa30.43■■■□□ 2.46
COPE-204ENST00000593827 CERKQ8TCT0 537 aa30.4■■■□□ 2.46
COPE-204ENST00000593827 RPRD2Q5VT52 1461 aaKnown RBP30.36■■■□□ 2.45
COPE-204ENST00000593827 EFCAB6Q5THR3 1501 aa30.35■■■□□ 2.45
COPE-204ENST00000593827 STAG3Q9UJ98 1225 aa30.34■■■□□ 2.45
COPE-204ENST00000593827 SLC52A1Q9NWF4 448 aa30.32■■■□□ 2.44
COPE-204ENST00000593827 UNC13BO14795 1591 aa30.31■■■□□ 2.44
COPE-204ENST00000593827 NUP155O75694 1391 aa30.29■■■□□ 2.44
COPE-204ENST00000593827 NOS1P29475 1434 aa30.29■■■□□ 2.44
COPE-204ENST00000593827 EID1Q9Y6B2 187 aa30.26■■■□□ 2.43
COPE-204ENST00000593827 TET3O43151 1660 aa30.26■■■□□ 2.43
COPE-204ENST00000593827 IDI1Q13907 227 aa30.24■■■□□ 2.43
COPE-204ENST00000593827 MED14O60244 1454 aa30.24■■■□□ 2.43
COPE-204ENST00000593827 CFAP65Q6ZU64 1925 aaKnown RBP30.24■■■□□ 2.43
COPE-204ENST00000593827 NPHP4O75161 1426 aaPredicted RBP30.23■■■□□ 2.43
COPE-204ENST00000593827 POLR1AO95602 1720 aaPredicted RBP30.22■■■□□ 2.43
COPE-204ENST00000593827 IQGAP3Q86VI3 1631 aa30.2■■■□□ 2.43
COPE-204ENST00000593827 NAIPQ13075 1403 aa30.2■■■□□ 2.42
COPE-204ENST00000593827 ZNF335Q9H4Z2 1342 aaPredicted RBP30.2■■■□□ 2.42
COPE-204ENST00000593827 TXNDC2Q86VQ3 553 aa30.19■■■□□ 2.42
COPE-204ENST00000593827 NEURL4Q96JN8 1562 aa30.19■■■□□ 2.42
COPE-204ENST00000593827 UBR1Q8IWV7 1749 aa30.19■■■□□ 2.42
COPE-204ENST00000593827 GCC2Q8IWJ2 1684 aa30.18■■■□□ 2.42
COPE-204ENST00000593827 HFM1A2PYH4 1435 aa30.18■■■□□ 2.42
COPE-204ENST00000593827 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
COPE-204ENST00000593827 SCAF11Q99590 1463 aaKnown RBP30.18■■■□□ 2.42
COPE-204ENST00000593827 LTBP4Q8N2S1 1624 aa30.18■■■□□ 2.42
COPE-204ENST00000593827 SLIT1O75093 1534 aa30.17■■■□□ 2.42
COPE-204ENST00000593827 ARHGAP23Q9P227 1491 aa30.17■■■□□ 2.42
COPE-204ENST00000593827 TMEM2Q9UHN6 1383 aa30.16■■■□□ 2.42
COPE-204ENST00000593827 SYNMO15061 1565 aa30.16■■■□□ 2.42
COPE-204ENST00000593827 KDM5AP29375 1690 aaKnown RBP30.15■■■□□ 2.42
COPE-204ENST00000593827 PIK3C2BO00750 1634 aa30.14■■■□□ 2.42
COPE-204ENST00000593827 HDGFP51858 240 aaKnown RBP30.14■■■□□ 2.42
COPE-204ENST00000593827 ADGRB3O60242 1522 aa30.11■■■□□ 2.41
COPE-204ENST00000593827 LTKP29376 864 aa30.1■■■□□ 2.41
COPE-204ENST00000593827 IQGAP1P46940 1657 aa30.08■■■□□ 2.41
COPE-204ENST00000593827 TRIM52Q96A61 297 aa30.08■■■□□ 2.41
COPE-204ENST00000593827 CPS1P31327 1500 aa30.07■■■□□ 2.4
COPE-204ENST00000593827 ACIN1Q9UKV3 1341 aaKnown RBP30.07■■■□□ 2.4
COPE-204ENST00000593827 E9PCH4 1651 aa30.05■■■□□ 2.4
COPE-204ENST00000593827 CHGAP10645 457 aaKnown RBP30.04■■■□□ 2.4
COPE-204ENST00000593827 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.02■■■□□ 2.4
COPE-204ENST00000593827 PPP1R15AO75807 674 aaPredicted RBP30■■■□□ 2.39
COPE-204ENST00000593827 BCANQ96GW7 911 aa29.98■■■□□ 2.39
COPE-204ENST00000593827 SLC4A1APQ9BWU0 796 aaKnown RBP29.97■■■□□ 2.39
COPE-204ENST00000593827 RIMS2Q9UQ26 1411 aa29.96■■■□□ 2.39
COPE-204ENST00000593827 TMEM131LA2VDJ0 1609 aa29.93■■■□□ 2.38
COPE-204ENST00000593827 UBAP1LF5GYI3 381 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms