RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 DUOX2Q9NRD8 1548 aa29.54■■■□□ 2.32
LTBP4-208ENST00000593738 KDM5DQ9BY66 1539 aa29.52■■■□□ 2.32
LTBP4-208ENST00000593738 WASHC2CQ9Y4E1 1318 aa29.51■■■□□ 2.32
LTBP4-208ENST00000593738 RNF17Q9BXT8 1623 aaKnown RBP29.51■■■□□ 2.31
LTBP4-208ENST00000593738 PTPRKQ15262 1439 aa29.51■■■□□ 2.31
LTBP4-208ENST00000593738 KIF15Q9NS87 1388 aa29.48■■■□□ 2.31
LTBP4-208ENST00000593738 ANKRD30AQ9BXX3 1397 aa29.45■■■□□ 2.31
LTBP4-208ENST00000593738 FAM50AQ14320 339 aaKnown RBP29.45■■■□□ 2.31
LTBP4-208ENST00000593738 RRP7BPQ9NSQ0 103 aa29.45■■■□□ 2.31
LTBP4-208ENST00000593738 ERBINQ96RT1 1412 aa29.44■■■□□ 2.3
LTBP4-208ENST00000593738 ZC3H13Q5T200 1668 aaKnown RBP29.43■■■□□ 2.3
LTBP4-208ENST00000593738 DMRT2Q9Y5R5 561 aa29.42■■■□□ 2.3
LTBP4-208ENST00000593738 PZPP20742 1482 aa29.42■■■□□ 2.3
LTBP4-208ENST00000593738 STRCQ7RTU9 1775 aa29.41■■■□□ 2.3
LTBP4-208ENST00000593738 CHIC2Q9UKJ5 165 aa29.4■■■□□ 2.3
LTBP4-208ENST00000593738 MYO3AQ8NEV4 1616 aa29.4■■■□□ 2.3
LTBP4-208ENST00000593738 NCOA1Q15788 1441 aa29.39■■■□□ 2.3
LTBP4-208ENST00000593738 ZNF142P52746 1687 aaPredicted RBP29.39■■■□□ 2.3
LTBP4-208ENST00000593738 MROH1Q8NDA8 1641 aa29.38■■■□□ 2.29
LTBP4-208ENST00000593738 ADGRL2O95490 1459 aa29.37■■■□□ 2.29
LTBP4-208ENST00000593738 ABCC3O15438 1527 aa29.37■■■□□ 2.29
LTBP4-208ENST00000593738 CEP170BQ9Y4F5 1589 aaPredicted RBP29.35■■■□□ 2.29
LTBP4-208ENST00000593738 FBXO31Q5XUX0 539 aaPredicted RBP29.34■■■□□ 2.29
LTBP4-208ENST00000593738 TNRQ92752 1358 aa29.33■■■□□ 2.29
LTBP4-208ENST00000593738 CAMSAP1Q5T5Y3 1602 aa29.32■■■□□ 2.28
LTBP4-208ENST00000593738 PRDM15P57071 1507 aaPredicted RBP29.32■■■□□ 2.28
LTBP4-208ENST00000593738 A2ML1A8K2U0 1454 aa29.31■■■□□ 2.28
LTBP4-208ENST00000593738 DEPDC5O75140 1603 aa29.31■■■□□ 2.28
LTBP4-208ENST00000593738 PTPRTO14522 1441 aa29.3■■■□□ 2.28
LTBP4-208ENST00000593738 CEP152O94986 1710 aa29.3■■■□□ 2.28
LTBP4-208ENST00000593738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.29■■■□□ 2.282e-6■■■■□ 20.4
LTBP4-208ENST00000593738 PPARGC1BQ86YN6 1023 aaKnown RBP29.29■■■□□ 2.28
LTBP4-208ENST00000593738 KANK1Q14678 1352 aa29.27■■■□□ 2.28
LTBP4-208ENST00000593738 PLA2R1Q13018 1463 aa29.27■■■□□ 2.28
LTBP4-208ENST00000593738 NLRP1Q9C000 1473 aa29.25■■■□□ 2.27
LTBP4-208ENST00000593738 ILDR1Q86SU0 546 aaPredicted RBP29.24■■■□□ 2.27
LTBP4-208ENST00000593738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.24■■■□□ 2.27
LTBP4-208ENST00000593738 SPATA31D1Q6ZQQ2 1576 aa29.23■■■□□ 2.27
LTBP4-208ENST00000593738 ARHGAP31Q2M1Z3 1444 aa29.23■■■□□ 2.27
LTBP4-208ENST00000593738 PKD2Q13563 968 aa29.23■■■□□ 2.27
LTBP4-208ENST00000593738 ANKRD50Q9ULJ7 1429 aa29.21■■■□□ 2.27
LTBP4-208ENST00000593738 ROCK1Q13464 1354 aa29.21■■■□□ 2.27
LTBP4-208ENST00000593738 ERVK-7P63135 1459 aa29.2■■■□□ 2.26
LTBP4-208ENST00000593738 VWDEQ8N2E2 1590 aa29.18■■■□□ 2.26
LTBP4-208ENST00000593738 LMTK2Q8IWU2 1503 aa29.18■■■□□ 2.26
LTBP4-208ENST00000593738 CFAP65Q6ZU64 1925 aaKnown RBP29.18■■■□□ 2.26
LTBP4-208ENST00000593738 NCKAP5LQ9HCH0 1330 aa29.18■■■□□ 2.26
LTBP4-208ENST00000593738 THEMISQ8N1K5 641 aaPredicted RBP29.17■■■□□ 2.26
LTBP4-208ENST00000593738 FBXO41Q8TF61 875 aa29.15■■■□□ 2.26
LTBP4-208ENST00000593738 UGGT1Q9NYU2 1555 aa29.14■■■□□ 2.26
LTBP4-208ENST00000593738 RRBP1Q9P2E9 1410 aaKnown RBP29.13■■■□□ 2.25
LTBP4-208ENST00000593738 CERKQ8TCT0 537 aa29.13■■■□□ 2.25
LTBP4-208ENST00000593738 ITGAEP38570 1179 aa29.1■■■□□ 2.25
LTBP4-208ENST00000593738 POLR1AO95602 1720 aaPredicted RBP29.08■■■□□ 2.25
LTBP4-208ENST00000593738 ANKLE2Q86XL3 938 aa29.07■■■□□ 2.24
LTBP4-208ENST00000593738 UNC13BO14795 1591 aa29.05■■■□□ 2.24
LTBP4-208ENST00000593738 EFCAB6Q5THR3 1501 aa29.05■■■□□ 2.24
LTBP4-208ENST00000593738 UBR1Q8IWV7 1749 aa29.02■■■□□ 2.24
LTBP4-208ENST00000593738 RPRD2Q5VT52 1461 aaKnown RBP29.01■■■□□ 2.23
LTBP4-208ENST00000593738 TET3O43151 1660 aa29.01■■■□□ 2.23
LTBP4-208ENST00000593738 LTBP4Q8N2S1 1624 aa29.01■■■□□ 2.23
LTBP4-208ENST00000593738 NEURL4Q96JN8 1562 aa29■■■□□ 2.23
LTBP4-208ENST00000593738 NOS1P29475 1434 aa28.98■■■□□ 2.23
LTBP4-208ENST00000593738 MED14O60244 1454 aa28.97■■■□□ 2.23
LTBP4-208ENST00000593738 GCC2Q8IWJ2 1684 aa28.97■■■□□ 2.23
LTBP4-208ENST00000593738 KDM5AP29375 1690 aaKnown RBP28.96■■■□□ 2.23
LTBP4-208ENST00000593738 PIK3C2BO00750 1634 aa28.94■■■□□ 2.22
LTBP4-208ENST00000593738 SYNMO15061 1565 aa28.94■■■□□ 2.22
LTBP4-208ENST00000593738 IQGAP3Q86VI3 1631 aa28.94■■■□□ 2.22
LTBP4-208ENST00000593738 IDI1Q13907 227 aa28.93■■■□□ 2.22
LTBP4-208ENST00000593738 SLC52A1Q9NWF4 448 aa28.93■■■□□ 2.22
LTBP4-208ENST00000593738 NPHP4O75161 1426 aaPredicted RBP28.93■■■□□ 2.22
LTBP4-208ENST00000593738 ZNF335Q9H4Z2 1342 aaPredicted RBP28.93■■■□□ 2.22
LTBP4-208ENST00000593738 IQSEC2Q5JU85 1478 aa28.92■■■□□ 2.22
LTBP4-208ENST00000593738 STAG3Q9UJ98 1225 aa28.92■■■□□ 2.22
LTBP4-208ENST00000593738 SLIT1O75093 1534 aa28.91■■■□□ 2.22
LTBP4-208ENST00000593738 ARHGAP23Q9P227 1491 aa28.91■■■□□ 2.22
LTBP4-208ENST00000593738 NUP155O75694 1391 aa28.9■■■□□ 2.22
LTBP4-208ENST00000593738 IQGAP1P46940 1657 aa28.88■■■□□ 2.21
LTBP4-208ENST00000593738 EID1Q9Y6B2 187 aa28.87■■■□□ 2.21
LTBP4-208ENST00000593738 E9PCH4 1651 aa28.86■■■□□ 2.21
LTBP4-208ENST00000593738 SCAF11Q99590 1463 aaKnown RBP28.86■■■□□ 2.21
LTBP4-208ENST00000593738 TXNDC2Q86VQ3 553 aa28.85■■■□□ 2.21
LTBP4-208ENST00000593738 TMEM2Q9UHN6 1383 aa28.85■■■□□ 2.21
LTBP4-208ENST00000593738 NAIPQ13075 1403 aa28.85■■■□□ 2.21
LTBP4-208ENST00000593738 LTKP29376 864 aa28.82■■■□□ 2.2
LTBP4-208ENST00000593738 ADGRB3O60242 1522 aa28.82■■■□□ 2.2
LTBP4-208ENST00000593738 HFM1A2PYH4 1435 aa28.8■■■□□ 2.2
LTBP4-208ENST00000593738 CPS1P31327 1500 aa28.79■■■□□ 2.2
LTBP4-208ENST00000593738 TMEM131LA2VDJ0 1609 aa28.72■■■□□ 2.19
LTBP4-208ENST00000593738 HDGFP51858 240 aaKnown RBP28.72■■■□□ 2.19
LTBP4-208ENST00000593738 MYO5BQ9ULV0 1848 aa28.71■■■□□ 2.19
LTBP4-208ENST00000593738 SPHKAPQ2M3C7 1700 aa28.68■■■□□ 2.18
LTBP4-208ENST00000593738 TRIM52Q96A61 297 aa28.66■■■□□ 2.18
LTBP4-208ENST00000593738 CHGAP10645 457 aaKnown RBP28.65■■■□□ 2.18
LTBP4-208ENST00000593738 ZFYVE9O95405 1425 aa28.65■■■□□ 2.18
LTBP4-208ENST00000593738 STRCP1A6NGW2 1772 aa28.65■■■□□ 2.18
LTBP4-208ENST00000593738 RIMS2Q9UQ26 1411 aa28.64■■■□□ 2.18
LTBP4-208ENST00000593738 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.64■■■□□ 2.18
LTBP4-208ENST00000593738 UBAP1LF5GYI3 381 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms