RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 FAM135AQ9P2D6 1515 aa34.36■■■■□ 3.09
USF2-204ENST00000593708 IQSEC2Q5JU85 1478 aa34.36■■■■□ 3.09
USF2-204ENST00000593708 RSPH4AQ5TD94 716 aa34.36■■■■□ 3.09
USF2-204ENST00000593708 PZPP20742 1482 aa34.34■■■■□ 3.09
USF2-204ENST00000593708 ZNF335Q9H4Z2 1342 aaPredicted RBP34.33■■■■□ 3.09
USF2-204ENST00000593708 PKD2Q13563 968 aa34.32■■■■□ 3.08
USF2-204ENST00000593708 KANK4Q5T7N3 995 aaPredicted RBP34.32■■■■□ 3.08
USF2-204ENST00000593708 FBXO31Q5XUX0 539 aaPredicted RBP34.32■■■■□ 3.08
USF2-204ENST00000593708 MAST1Q9Y2H9 1570 aa34.31■■■■□ 3.08
USF2-204ENST00000593708 MAP3K1Q13233 1512 aa34.3■■■■□ 3.08
USF2-204ENST00000593708 TNRQ92752 1358 aa34.3■■■■□ 3.08
USF2-204ENST00000593708 RNF17Q9BXT8 1623 aaKnown RBP34.28■■■■□ 3.08
USF2-204ENST00000593708 POLR1AO95602 1720 aaPredicted RBP34.27■■■■□ 3.08
USF2-204ENST00000593708 WASHC2CQ9Y4E1 1318 aa34.26■■■■□ 3.07
USF2-204ENST00000593708 NEURL4Q96JN8 1562 aa34.25■■■■□ 3.07
USF2-204ENST00000593708 TSPY4P0CV99 314 aa34.24■■■■□ 3.07
USF2-204ENST00000593708 TSPY10P0CW01 314 aa34.24■■■■□ 3.07
USF2-204ENST00000593708 MYOM3Q5VTT5 1437 aa34.23■■■■□ 3.07
USF2-204ENST00000593708 ABCC3O15438 1527 aa34.2■■■■□ 3.06
USF2-204ENST00000593708 MROH1Q8NDA8 1641 aa34.19■■■■□ 3.06
USF2-204ENST00000593708 EIF2AK4Q9P2K8 1649 aaKnown RBP34.19■■■■□ 3.06
USF2-204ENST00000593708 MIA2Q96PC5 1412 aa34.19■■■■□ 3.06
USF2-204ENST00000593708 ZC3H13Q5T200 1668 aaKnown RBP34.17■■■■□ 3.06
USF2-204ENST00000593708 NLRP1Q9C000 1473 aa34.14■■■■□ 3.06
USF2-204ENST00000593708 DISP3Q9P2K9 1392 aa34.13■■■■□ 3.05
USF2-204ENST00000593708 CEP152O94986 1710 aa34.11■■■■□ 3.05
USF2-204ENST00000593708 CROCC2H7BZ55 1655 aa34.11■■■■□ 3.05
USF2-204ENST00000593708 UGGT1Q9NYU2 1555 aa34.11■■■■□ 3.05
USF2-204ENST00000593708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.11■■■■□ 3.05
USF2-204ENST00000593708 SPATA31D1Q6ZQQ2 1576 aa34.1■■■■□ 3.05
USF2-204ENST00000593708 DUOX2Q9NRD8 1548 aa34.06■■■■□ 3.04
USF2-204ENST00000593708 UBAP1LF5GYI3 381 aa34.06■■■■□ 3.04
USF2-204ENST00000593708 ERVK-7P63135 1459 aa34.06■■■■□ 3.04
USF2-204ENST00000593708 CFAP65Q6ZU64 1925 aaKnown RBP34.05■■■■□ 3.04
USF2-204ENST00000593708 DEPDC5O75140 1603 aa34.04■■■■□ 3.04
USF2-204ENST00000593708 PTPN23Q9H3S7 1636 aa34.04■■■■□ 3.04
USF2-204ENST00000593708 ILDR2Q71H61 639 aa34.04■■■■□ 3.04
USF2-204ENST00000593708 VWDEQ8N2E2 1590 aa34.03■■■■□ 3.04
USF2-204ENST00000593708 SHANK2Q9UPX8 1470 aa34.02■■■■□ 3.04
USF2-204ENST00000593708 ABCC5O15440 1437 aa34.02■■■■□ 3.04
USF2-204ENST00000593708 THEMISQ8N1K5 641 aaPredicted RBP34.01■■■■□ 3.03
USF2-204ENST00000593708 MED14O60244 1454 aa34.01■■■■□ 3.03
USF2-204ENST00000593708 CPS1P31327 1500 aa34■■■■□ 3.03
USF2-204ENST00000593708 ANKLE2Q86XL3 938 aa34■■■■□ 3.03
USF2-204ENST00000593708 IQGAP1P46940 1657 aa33.99■■■■□ 3.03
USF2-204ENST00000593708 PRDM15P57071 1507 aaPredicted RBP33.99■■■■□ 3.03
USF2-204ENST00000593708 KIF15Q9NS87 1388 aa33.98■■■■□ 3.03
USF2-204ENST00000593708 NPHP4O75161 1426 aaPredicted RBP33.98■■■■□ 3.03
USF2-204ENST00000593708 UBR1Q8IWV7 1749 aa33.96■■■■□ 3.03
USF2-204ENST00000593708 DAPK1P53355 1430 aa33.93■■■■□ 3.02
USF2-204ENST00000593708 ERBINQ96RT1 1412 aa33.93■■■■□ 3.02
USF2-204ENST00000593708 FGD6Q6ZV73 1430 aa33.92■■■■□ 3.02
USF2-204ENST00000593708 STRCP1A6NGW2 1772 aa33.91■■■■□ 3.02
USF2-204ENST00000593708 RRP7BPQ9NSQ0 103 aa33.9■■■■□ 3.02
USF2-204ENST00000593708 ARHGAP31Q2M1Z3 1444 aa33.87■■■■□ 3.01
USF2-204ENST00000593708 APLP2Q06481 763 aa33.86■■■■□ 3.01
USF2-204ENST00000593708 ALKQ9UM73 1620 aa33.85■■■■□ 3.01
USF2-204ENST00000593708 PIP4K2BP78356 416 aa33.79■■■■□ 3
USF2-204ENST00000593708 SCAF11Q99590 1463 aaKnown RBP33.79■■■■□ 3
USF2-204ENST00000593708 ARHGAP23Q9P227 1491 aa33.79■■■■□ 3
USF2-204ENST00000593708 PIK3C2BO00750 1634 aa33.79■■■■□ 3
USF2-204ENST00000593708 SCAF1Q9H7N4 1312 aaKnown RBP33.79■■■■□ 3
USF2-204ENST00000593708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.78■■■■□ 34e-8■□□□□ 10.5
USF2-204ENST00000593708 SLIT1O75093 1534 aa33.78■■■■□ 3
USF2-204ENST00000593708 HSPA1LP34931 641 aa33.76■■■□□ 2.99
USF2-204ENST00000593708 CHIC2Q9UKJ5 165 aa33.76■■■□□ 2.99
USF2-204ENST00000593708 LRRC7Q96NW7 1537 aa33.75■■■□□ 2.99
USF2-204ENST00000593708 SOCS7O14512 581 aa33.75■■■□□ 2.99
USF2-204ENST00000593708 TOM1O60784 492 aa33.75■■■□□ 2.99
USF2-204ENST00000593708 SYNMO15061 1565 aa33.75■■■□□ 2.99
USF2-204ENST00000593708 LMTK2Q8IWU2 1503 aa33.74■■■□□ 2.99
USF2-204ENST00000593708 ANKRD30AQ9BXX3 1397 aa33.73■■■□□ 2.99
USF2-204ENST00000593708 LTKP29376 864 aa33.73■■■□□ 2.99
USF2-204ENST00000593708 KANK1Q14678 1352 aa33.7■■■□□ 2.98
USF2-204ENST00000593708 ADGRL2O95490 1459 aa33.69■■■□□ 2.98
USF2-204ENST00000593708 EFCAB6Q5THR3 1501 aa33.67■■■□□ 2.98
USF2-204ENST00000593708 KDM5AP29375 1690 aaKnown RBP33.66■■■□□ 2.98
USF2-204ENST00000593708 MED1Q15648 1581 aaPredicted RBP33.65■■■□□ 2.98
USF2-204ENST00000593708 TXNDC2Q86VQ3 553 aa33.65■■■□□ 2.98
USF2-204ENST00000593708 XIRP1Q702N8 1843 aaKnown RBP33.64■■■□□ 2.98
USF2-204ENST00000593708 TMEM2Q9UHN6 1383 aa33.63■■■□□ 2.97
USF2-204ENST00000593708 NOS1P29475 1434 aa33.6■■■□□ 2.97
USF2-204ENST00000593708 IDI1Q13907 227 aa33.58■■■□□ 2.97
USF2-204ENST00000593708 FAM50AQ14320 339 aaKnown RBP33.57■■■□□ 2.96
USF2-204ENST00000593708 EID1Q9Y6B2 187 aa33.56■■■□□ 2.96
USF2-204ENST00000593708 ADGRB3O60242 1522 aa33.55■■■□□ 2.96
USF2-204ENST00000593708 ANKRD50Q9ULJ7 1429 aa33.53■■■□□ 2.96
USF2-204ENST00000593708 STAG3Q9UJ98 1225 aa33.52■■■□□ 2.96
USF2-204ENST00000593708 TET3O43151 1660 aa33.5■■■□□ 2.95
USF2-204ENST00000593708 MYO5BQ9ULV0 1848 aa33.49■■■□□ 2.95
USF2-204ENST00000593708 SENP3Q9H4L4 574 aaPredicted RBP33.47■■■□□ 2.95
USF2-204ENST00000593708 RPRD2Q5VT52 1461 aaKnown RBP33.46■■■□□ 2.95
USF2-204ENST00000593708 UNC13BO14795 1591 aa33.45■■■□□ 2.95
USF2-204ENST00000593708 GCC2Q8IWJ2 1684 aa33.43■■■□□ 2.94
USF2-204ENST00000593708 SLC26A8Q96RN1 970 aa33.41■■■□□ 2.94
USF2-204ENST00000593708 SLC52A1Q9NWF4 448 aa33.4■■■□□ 2.94
USF2-204ENST00000593708 NWD1Q149M9 1564 aa33.38■■■□□ 2.93
USF2-204ENST00000593708 ZFYVE9O95405 1425 aa33.37■■■□□ 2.93
USF2-204ENST00000593708 TMEM94Q12767 1356 aa33.37■■■□□ 2.93
USF2-204ENST00000593708 TMEM131LA2VDJ0 1609 aa33.37■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms