RNA–Protein interactions for RNA: ENST00000592996.5

CCDC106-208, Transcript of coiled-coil domain containing 106, humanhuman

TSL 3

Gene CCDC106, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC106-208ENST00000592996 PLA2R1Q13018 1463 aa29.1■■■□□ 2.25
CCDC106-208ENST00000592996 TSPY4P0CV99 314 aa29.09■■■□□ 2.25
CCDC106-208ENST00000592996 TSPY10P0CW01 314 aa29.09■■■□□ 2.25
CCDC106-208ENST00000592996 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
CCDC106-208ENST00000592996 MAP3K1Q13233 1512 aa29.09■■■□□ 2.25
CCDC106-208ENST00000592996 KDM5DQ9BY66 1539 aa29.05■■■□□ 2.24
CCDC106-208ENST00000592996 TCOF1Q13428 1488 aaKnown RBP29.04■■■□□ 2.24
CCDC106-208ENST00000592996 NCKAP5LQ9HCH0 1330 aa29.03■■■□□ 2.24
CCDC106-208ENST00000592996 MYOM3Q5VTT5 1437 aa29.02■■■□□ 2.24
CCDC106-208ENST00000592996 ZNF335Q9H4Z2 1342 aaPredicted RBP29.01■■■□□ 2.23
CCDC106-208ENST00000592996 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.23
CCDC106-208ENST00000592996 FAM135AQ9P2D6 1515 aa29■■■□□ 2.23
CCDC106-208ENST00000592996 WASHC2CQ9Y4E1 1318 aa29■■■□□ 2.23
CCDC106-208ENST00000592996 PKD2Q13563 968 aa29■■■□□ 2.23
CCDC106-208ENST00000592996 DNMT1P26358 1616 aaKnown RBP28.98■■■□□ 2.23
CCDC106-208ENST00000592996 A2ML1A8K2U0 1454 aa28.97■■■□□ 2.23
CCDC106-208ENST00000592996 MIA2Q96PC5 1412 aa28.97■■■□□ 2.23
CCDC106-208ENST00000592996 APLP2Q06481 763 aa28.97■■■□□ 2.23
CCDC106-208ENST00000592996 FBXO31Q5XUX0 539 aaPredicted RBP28.97■■■□□ 2.23
CCDC106-208ENST00000592996 PZPP20742 1482 aa28.97■■■□□ 2.23
CCDC106-208ENST00000592996 TNRQ92752 1358 aa28.95■■■□□ 2.22
CCDC106-208ENST00000592996 RNF17Q9BXT8 1623 aaKnown RBP28.94■■■□□ 2.22
CCDC106-208ENST00000592996 EIF2AK4Q9P2K8 1649 aaKnown RBP28.92■■■□□ 2.22
CCDC106-208ENST00000592996 UBAP1LF5GYI3 381 aa28.92■■■□□ 2.22
CCDC106-208ENST00000592996 POLR1AO95602 1720 aaPredicted RBP28.91■■■□□ 2.22
CCDC106-208ENST00000592996 ZC3H13Q5T200 1668 aaKnown RBP28.9■■■□□ 2.22
CCDC106-208ENST00000592996 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.21
CCDC106-208ENST00000592996 PTPN23Q9H3S7 1636 aa28.88■■■□□ 2.21
CCDC106-208ENST00000592996 CEP152O94986 1710 aa28.87■■■□□ 2.21
CCDC106-208ENST00000592996 ABCC3O15438 1527 aa28.85■■■□□ 2.21
CCDC106-208ENST00000592996 CFAP65Q6ZU64 1925 aaKnown RBP28.85■■■□□ 2.21
CCDC106-208ENST00000592996 DUOX2Q9NRD8 1548 aa28.84■■■□□ 2.21
CCDC106-208ENST00000592996 MROH1Q8NDA8 1641 aa28.83■■■□□ 2.21
CCDC106-208ENST00000592996 NLRP1Q9C000 1473 aa28.81■■■□□ 2.2
CCDC106-208ENST00000592996 NEURL4Q96JN8 1562 aa28.8■■■□□ 2.2
CCDC106-208ENST00000592996 UGGT1Q9NYU2 1555 aa28.8■■■□□ 2.2
CCDC106-208ENST00000592996 CPS1P31327 1500 aa28.79■■■□□ 2.2
CCDC106-208ENST00000592996 SHANK2Q9UPX8 1470 aa28.78■■■□□ 2.2
CCDC106-208ENST00000592996 ABCC5O15440 1437 aa28.78■■■□□ 2.2
CCDC106-208ENST00000592996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.78■■■□□ 2.23e-8■□□□□ 9.1
CCDC106-208ENST00000592996 KIF15Q9NS87 1388 aa28.77■■■□□ 2.2
CCDC106-208ENST00000592996 FGD6Q6ZV73 1430 aa28.77■■■□□ 2.2
CCDC106-208ENST00000592996 DAPK1P53355 1430 aa28.76■■■□□ 2.19
CCDC106-208ENST00000592996 THEMISQ8N1K5 641 aaPredicted RBP28.75■■■□□ 2.19
CCDC106-208ENST00000592996 RRP7BPQ9NSQ0 103 aa28.75■■■□□ 2.19
CCDC106-208ENST00000592996 ERVK-7P63135 1459 aa28.74■■■□□ 2.19
CCDC106-208ENST00000592996 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
CCDC106-208ENST00000592996 ERBINQ96RT1 1412 aa28.72■■■□□ 2.19
CCDC106-208ENST00000592996 PRDM15P57071 1507 aaPredicted RBP28.71■■■□□ 2.19
CCDC106-208ENST00000592996 MED1Q15648 1581 aaPredicted RBP28.7■■■□□ 2.18
CCDC106-208ENST00000592996 DEPDC5O75140 1603 aa28.69■■■□□ 2.18
CCDC106-208ENST00000592996 CHIC2Q9UKJ5 165 aa28.68■■■□□ 2.18
CCDC106-208ENST00000592996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.67■■■□□ 2.18
CCDC106-208ENST00000592996 VWDEQ8N2E2 1590 aa28.67■■■□□ 2.18
CCDC106-208ENST00000592996 HSPA1LP34931 641 aa28.66■■■□□ 2.18
CCDC106-208ENST00000592996 IQGAP1P46940 1657 aa28.66■■■□□ 2.18
CCDC106-208ENST00000592996 NPHP4O75161 1426 aaPredicted RBP28.65■■■□□ 2.18
CCDC106-208ENST00000592996 UBR1Q8IWV7 1749 aa28.65■■■□□ 2.18
CCDC106-208ENST00000592996 TOM1O60784 492 aa28.64■■■□□ 2.18
CCDC106-208ENST00000592996 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.17
CCDC106-208ENST00000592996 ANKRD30AQ9BXX3 1397 aa28.63■■■□□ 2.17
CCDC106-208ENST00000592996 MED14O60244 1454 aa28.63■■■□□ 2.17
CCDC106-208ENST00000592996 PIP4K2BP78356 416 aa28.62■■■□□ 2.17
CCDC106-208ENST00000592996 KANK1Q14678 1352 aa28.61■■■□□ 2.17
CCDC106-208ENST00000592996 FAM50AQ14320 339 aaKnown RBP28.59■■■□□ 2.17
CCDC106-208ENST00000592996 ARHGAP31Q2M1Z3 1444 aa28.58■■■□□ 2.17
CCDC106-208ENST00000592996 ALKQ9UM73 1620 aa28.58■■■□□ 2.17
CCDC106-208ENST00000592996 PIK3C2BO00750 1634 aa28.53■■■□□ 2.16
CCDC106-208ENST00000592996 STRCP1A6NGW2 1772 aa28.52■■■□□ 2.16
CCDC106-208ENST00000592996 ADGRL2O95490 1459 aa28.51■■■□□ 2.15
CCDC106-208ENST00000592996 SCAF11Q99590 1463 aaKnown RBP28.51■■■□□ 2.15
CCDC106-208ENST00000592996 SYNMO15061 1565 aa28.5■■■□□ 2.15
CCDC106-208ENST00000592996 LMTK2Q8IWU2 1503 aa28.48■■■□□ 2.15
CCDC106-208ENST00000592996 STAG3Q9UJ98 1225 aa28.47■■■□□ 2.15
CCDC106-208ENST00000592996 SLIT1O75093 1534 aa28.47■■■□□ 2.15
CCDC106-208ENST00000592996 ARHGAP23Q9P227 1491 aa28.46■■■□□ 2.15
CCDC106-208ENST00000592996 EFCAB6Q5THR3 1501 aa28.45■■■□□ 2.15
CCDC106-208ENST00000592996 LRRC7Q96NW7 1537 aa28.45■■■□□ 2.15
CCDC106-208ENST00000592996 TXNDC2Q86VQ3 553 aa28.45■■■□□ 2.14
CCDC106-208ENST00000592996 LTKP29376 864 aa28.43■■■□□ 2.14
CCDC106-208ENST00000592996 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
CCDC106-208ENST00000592996 EID1Q9Y6B2 187 aa28.42■■■□□ 2.14
CCDC106-208ENST00000592996 KDM5AP29375 1690 aaKnown RBP28.41■■■□□ 2.14
CCDC106-208ENST00000592996 PHF23Q9BUL5 403 aaPredicted RBP28.4■■■□□ 2.14
CCDC106-208ENST00000592996 IDI1Q13907 227 aa28.38■■■□□ 2.13
CCDC106-208ENST00000592996 TMEM2Q9UHN6 1383 aa28.37■■■□□ 2.13
CCDC106-208ENST00000592996 NOS1P29475 1434 aa28.35■■■□□ 2.13
CCDC106-208ENST00000592996 TET3O43151 1660 aa28.35■■■□□ 2.13
CCDC106-208ENST00000592996 ADGRB3O60242 1522 aa28.33■■■□□ 2.13
CCDC106-208ENST00000592996 GCC2Q8IWJ2 1684 aa28.32■■■□□ 2.12
CCDC106-208ENST00000592996 MYO5BQ9ULV0 1848 aa28.32■■■□□ 2.12
CCDC106-208ENST00000592996 UNC13BO14795 1591 aa28.31■■■□□ 2.12
CCDC106-208ENST00000592996 XIRP1Q702N8 1843 aaKnown RBP28.3■■■□□ 2.12
CCDC106-208ENST00000592996 RPRD2Q5VT52 1461 aaKnown RBP28.3■■■□□ 2.12
CCDC106-208ENST00000592996 PPARGC1BQ86YN6 1023 aaKnown RBP28.3■■■□□ 2.12
CCDC106-208ENST00000592996 SENP3Q9H4L4 574 aaPredicted RBP28.28■■■□□ 2.12
CCDC106-208ENST00000592996 ITGAEP38570 1179 aa28.27■■■□□ 2.12
CCDC106-208ENST00000592996 SLC52A1Q9NWF4 448 aa28.27■■■□□ 2.12
CCDC106-208ENST00000592996 ROCK1Q13464 1354 aa28.24■■■□□ 2.11
CCDC106-208ENST00000592996 E9PCH4 1651 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms