RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 PARD3Q8TEW0 1356 aa23.87■■□□□ 1.41
SPC24-206ENST00000592540 LAS1LQ9Y4W2 734 aaKnown RBP23.86■■□□□ 1.41
SPC24-206ENST00000592540 KDM5DQ9BY66 1539 aa23.86■■□□□ 1.41
SPC24-206ENST00000592540 NEFMP07197 916 aa23.85■■□□□ 1.41
SPC24-206ENST00000592540 CDC42BPAQ5VT25 1732 aa23.85■■□□□ 1.41
SPC24-206ENST00000592540 DNAJC5BQ9UF47 199 aa23.84■■□□□ 1.41
SPC24-206ENST00000592540 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
SPC24-206ENST00000592540 SHANK2Q9UPX8 1470 aa23.82■■□□□ 1.4
SPC24-206ENST00000592540 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
SPC24-206ENST00000592540 CDCA7LQ96GN5 454 aa23.82■■□□□ 1.4
SPC24-206ENST00000592540 PLB1Q6P1J6 1458 aa23.82■■□□□ 1.4
SPC24-206ENST00000592540 C9orf84Q5VXU9 1444 aa23.8■■□□□ 1.4
SPC24-206ENST00000592540 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
SPC24-206ENST00000592540 PPM1GO15355 546 aaPredicted RBP23.8■■□□□ 1.4
SPC24-206ENST00000592540 IL27Q8NEV9 243 aa23.79■■□□□ 1.4
SPC24-206ENST00000592540 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
SPC24-206ENST00000592540 TRPM1Q7Z4N2 1603 aa23.79■■□□□ 1.4
SPC24-206ENST00000592540 PTPRGP23470 1445 aa23.77■■□□□ 1.4
SPC24-206ENST00000592540 PER1O15534 1290 aaPredicted RBP23.77■■□□□ 1.4
SPC24-206ENST00000592540 PLIN1O60240 522 aa23.76■■□□□ 1.39
SPC24-206ENST00000592540 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
SPC24-206ENST00000592540 INSRP06213 1382 aa23.75■■□□□ 1.39
SPC24-206ENST00000592540 BLMP54132 1417 aaPredicted RBP23.74■■□□□ 1.39
SPC24-206ENST00000592540 ZMYM4Q5VZL5 1548 aa23.74■■□□□ 1.39
SPC24-206ENST00000592540 WASHC2CQ9Y4E1 1318 aa23.74■■□□□ 1.39
SPC24-206ENST00000592540 DDRGK1Q96HY6 314 aa23.73■■□□□ 1.39
SPC24-206ENST00000592540 CRBNQ96SW2 442 aa23.73■■□□□ 1.39
SPC24-206ENST00000592540 PRAG1Q86YV5 1406 aa23.72■■□□□ 1.39
SPC24-206ENST00000592540 ANO8Q9HCE9 1232 aaPredicted RBP23.72■■□□□ 1.39
SPC24-206ENST00000592540 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
SPC24-206ENST00000592540 TSPY4P0CV99 314 aa23.7■■□□□ 1.38
SPC24-206ENST00000592540 TSPY10P0CW01 314 aa23.7■■□□□ 1.38
SPC24-206ENST00000592540 SKAP1Q86WV1 359 aa23.7■■□□□ 1.38
SPC24-206ENST00000592540 PLEKHH2Q8IVE3 1493 aa23.68■■□□□ 1.38
SPC24-206ENST00000592540 COL17A1Q9UMD9 1497 aaPredicted RBP23.68■■□□□ 1.38
SPC24-206ENST00000592540 CC2D1BQ5T0F9 858 aaKnown RBP23.67■■□□□ 1.38
SPC24-206ENST00000592540 EIF4G3O43432 1585 aaKnown RBP23.67■■□□□ 1.38
SPC24-206ENST00000592540 FAM135AQ9P2D6 1515 aa23.66■■□□□ 1.38
SPC24-206ENST00000592540 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
SPC24-206ENST00000592540 RTN4Q9NQC3 1192 aaKnown RBP23.65■■□□□ 1.38
SPC24-206ENST00000592540 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
SPC24-206ENST00000592540 LAMC1P11047 1609 aa23.65■■□□□ 1.38
SPC24-206ENST00000592540 PLEKHD1A6NEE1 506 aa23.65■■□□□ 1.38
SPC24-206ENST00000592540 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.37
SPC24-206ENST00000592540 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.37
SPC24-206ENST00000592540 DISP3Q9P2K9 1392 aa23.63■■□□□ 1.37
SPC24-206ENST00000592540 PRDM15P57071 1507 aaPredicted RBP23.63■■□□□ 1.37
SPC24-206ENST00000592540 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
SPC24-206ENST00000592540 KDM2BQ8NHM5 1336 aa23.62■■□□□ 1.37
SPC24-206ENST00000592540 C20orf194Q5TEA3 1177 aa23.61■■□□□ 1.37
SPC24-206ENST00000592540 CARMIL2Q6F5E8 1435 aa23.61■■□□□ 1.37
SPC24-206ENST00000592540 ABCA8O94911 1581 aa23.61■■□□□ 1.37
SPC24-206ENST00000592540 PRKCSHP14314 528 aaPredicted RBP23.61■■□□□ 1.37
SPC24-206ENST00000592540 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
SPC24-206ENST00000592540 TESK2Q96S53 571 aa23.61■■□□□ 1.37
SPC24-206ENST00000592540 PANK3Q9H999 370 aa23.61■■□□□ 1.37
SPC24-206ENST00000592540 RGL3Q3MIN7 710 aa23.58■■□□□ 1.37
SPC24-206ENST00000592540 A2MP01023 1474 aa23.58■■□□□ 1.37
SPC24-206ENST00000592540 MYO5CQ9NQX4 1742 aa23.58■■□□□ 1.37
SPC24-206ENST00000592540 ERBINQ96RT1 1412 aa23.58■■□□□ 1.36
SPC24-206ENST00000592540 GSE1Q14687 1217 aa23.58■■□□□ 1.36
SPC24-206ENST00000592540 NFKBIBQ15653 356 aa23.58■■□□□ 1.36
SPC24-206ENST00000592540 ATP10BO94823 1461 aa23.57■■□□□ 1.36
SPC24-206ENST00000592540 CENPQQ7L2Z9 268 aaPredicted RBP23.56■■□□□ 1.36
SPC24-206ENST00000592540 PLA2R1Q13018 1463 aa23.54■■□□□ 1.36
SPC24-206ENST00000592540 SLC4A3P48751 1232 aa23.54■■□□□ 1.36
SPC24-206ENST00000592540 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
SPC24-206ENST00000592540 ADAMTS8Q9UP79 889 aa23.54■■□□□ 1.36
SPC24-206ENST00000592540 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
SPC24-206ENST00000592540 CCDC141Q6ZP82 1450 aa23.53■■□□□ 1.36
SPC24-206ENST00000592540 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
SPC24-206ENST00000592540 TMF1P82094 1093 aa23.52■■□□□ 1.36
SPC24-206ENST00000592540 DAXXQ9UER7 740 aaPredicted RBP23.52■■□□□ 1.36
SPC24-206ENST00000592540 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
SPC24-206ENST00000592540 FAM161AQ3B820 660 aa23.51■■□□□ 1.35
SPC24-206ENST00000592540 SAMD9LQ8IVG5 1584 aa23.51■■□□□ 1.35
SPC24-206ENST00000592540 UNC13BO14795 1591 aa23.51■■□□□ 1.35
SPC24-206ENST00000592540 C8orf34Q49A92 452 aa23.5■■□□□ 1.35
SPC24-206ENST00000592540 DUSP27Q5VZP5 1158 aa23.5■■□□□ 1.35
SPC24-206ENST00000592540 CDC42BPBQ9Y5S2 1711 aa23.5■■□□□ 1.35
SPC24-206ENST00000592540 PLEKHH1Q9ULM0 1364 aa23.49■■□□□ 1.35
SPC24-206ENST00000592540 BRPF3Q9ULD4 1205 aa23.49■■□□□ 1.35
SPC24-206ENST00000592540 FRAT1Q92837 279 aaPredicted RBP23.46■■□□□ 1.35
SPC24-206ENST00000592540 PREX2Q70Z35 1606 aa23.46■■□□□ 1.35
SPC24-206ENST00000592540 NUP160Q12769 1436 aa23.45■■□□□ 1.35
SPC24-206ENST00000592540 ZNF521Q96K83 1311 aa23.45■■□□□ 1.34
SPC24-206ENST00000592540 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
SPC24-206ENST00000592540 RNF17Q9BXT8 1623 aaKnown RBP23.44■■□□□ 1.34
SPC24-206ENST00000592540 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
SPC24-206ENST00000592540 RSPH4AQ5TD94 716 aa23.44■■□□□ 1.34
SPC24-206ENST00000592540 IQGAP3Q86VI3 1631 aa23.43■■□□□ 1.34
SPC24-206ENST00000592540 PPP2R1AP30153 589 aa23.43■■□□□ 1.34
SPC24-206ENST00000592540 FBLN2P98095 1184 aa23.43■■□□□ 1.34
SPC24-206ENST00000592540 GOLGA2Q08379 1002 aa23.43■■□□□ 1.34
SPC24-206ENST00000592540 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
SPC24-206ENST00000592540 WDR7Q9Y4E6 1490 aa23.42■■□□□ 1.34
SPC24-206ENST00000592540 CLASP1Q7Z460 1538 aa23.42■■□□□ 1.34
SPC24-206ENST00000592540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.41■■□□□ 1.342e-6■■■□□ 16.9
SPC24-206ENST00000592540 MAST1Q9Y2H9 1570 aa23.4■■□□□ 1.34
SPC24-206ENST00000592540 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms